mRNA_M-pyrifera_M_contig79455.18656.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: A0A7S4LLP3_9EUGL (Elongation of fatty acids protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLP3_9EUGL) HSP 1 Score: 169 bits (427), Expect = 1.470e-47 Identity = 92/240 (38.33%), Postives = 136/240 (56.67%), Query Frame = 1
Query: 1 MTGLYFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTGSAFGRLWGREL--SARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVYLSYLHLFHTSPYPLWLALVQFAVMTFFFVLFLQFSKKKY 714
M LYF +++ G + P FD+ +++ YN+ Q+ +N +V G ++V + M R WG + SA+ L F ++ H+H+K+ EFCDT FM+LR+K+ QLSFLHV HH+++ W+W+LV+ AP GD ++G+ +NSF+HV+MY YY GV PWKK +TQ Q+VQF+C SVY+ + YP WL VQ VM VLF F ++ Y
Sbjct: 63 MNILYFMMIYFGTKAMKNREP-----FDIKQWMFA----YNFMQTFINLAIVLGFMYEVHSTRM--------------RYWGSGIDWSAKGVGLGFMVYAHYHNKYLEFCDTAFMILRKKSGQLSFLHVYHHSLLTWSWWLVVWRAPGGDAWYGACYNSFIHVLMYSYYLFATFGVRCPWKKFLTQFQMVQFICCFTHSVYVGFFT--PEETYPKWLVFVQAFVMVNMLVLFGNFYRQSY 277
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: D7NLL1_PYRCR (Delta-5 elongase n=1 Tax=Pyramimonas cordata TaxID=647622 RepID=D7NLL1_PYRCR) HSP 1 Score: 161 bits (407), Expect = 4.650e-45 Identity = 86/236 (36.44%), Postives = 140/236 (59.32%), Query Frame = 1
Query: 13 YFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTGSAFGRLWGR--ELSARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVYLSYLHLFHTSPYPLWLALVQFAVMTFFFVLFLQFSKKKY 714
Y ++ G R++ +S F + + M++YN+YQ+ N++ ++ A + ++WG +++A ++ IWLH+++K+ E DT FMV+R+K DQLSFLH+ HH ++ W+W++V+ P GDC++GSS N+FVHV+MY YYGL A+GV+ WKK +TQ+Q++QF A S+Y +Y+ +T+ WL +Q VM FVLF F +K+Y
Sbjct: 51 YLLFIYFGK----RIMQNRSQPFGLKN----AMLVYNFYQTFFNSYCIYLFVTSHRAQGL--------------KVWGNIPDMTANSWGISQVIWLHYNNKYVELLDTFFMVMRKKFDQLSFLHIYHHTLLIWSWFVVMKLEPVGDCYFGSSVNTFVHVIMYSYYGLAALGVNCFWKKYITQIQMLQFCICASHSIYTAYVQ--NTA---FWLPYLQLWVMVNMFVLFANFYRKRY 259
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: A0A5A8DPY3_CAFRO (Elongation of fatty acids protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DPY3_CAFRO) HSP 1 Score: 160 bits (404), Expect = 9.120e-44 Identity = 106/249 (42.57%), Postives = 147/249 (59.04%), Query Frame = 1
Query: 1 MTGLYFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTG---SAFGR---LWGRELSARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPW--KKAVTQLQLVQFVCVALQSVYLSYLHLFHTSP---YPLWLALVQFAVMTFFFVLFLQFSKKKY 714
+T LY LVFVGP RL+ + A D+ ++ MV+YN+YQ+ LNAFMV L G N G A G +W + + + +++HF++KF E+ DTLFMVLR K QL+FLH HH +M +AW+ VL NA G ++GS+ NSF+HV+MY YYGLR++GV +P K AVTQ QL+QF V+LQS + +H + T+ YP+WL L+Q VM FV+F F + Y
Sbjct: 98 LTALYLVLVFVGP----RLMEGRPAA-DIKEW----MVVYNFYQTALNAFMVVALV-----------GSAVNRGLELQAQGHGLVMWAQPVKGTPALMVLGLYVHFNNKFIEYLDTLFMVLRHKTGQLTFLHCWHHFLMGFAWFCVLKNAAGGAAWYGSTANSFIHVIMYGYYGLRSVGVKLPTFLKAAVTQAQLLQFFLVSLQSFW--GIHDWLTTGNEVYPIWLTLLQLGVMVNMFVMFSGFYIRAY 324
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: A0A812S296_9DINO (Elongation of fatty acids protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812S296_9DINO) HSP 1 Score: 160 bits (404), Expect = 3.780e-42 Identity = 106/249 (42.57%), Postives = 147/249 (59.04%), Query Frame = 1
Query: 1 MTGLYFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTG---SAFGR---LWGRELSARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPW--KKAVTQLQLVQFVCVALQSVYLSYLHLFHTSP---YPLWLALVQFAVMTFFFVLFLQFSKKKY 714
+T LY LVFVGP RL+ + A D+ ++ MV+YN+YQ+ LNAFMV L G N G A G +W + + + +++HF++KF E+ DTLFMVLR K QL+FLH HH +M +AW+ VL NA G ++GS+ NSF+HV+MY YYGLR++GV +P K AVTQ QL+QF V+LQS + +H + T+ YP+WL L+Q VM FV+F F + Y
Sbjct: 295 LTALYLVLVFVGP----RLMEGRPAA-DIKEW----MVVYNFYQTALNAFMVVALV-----------GSAVNRGLELQAQGHGLVMWAQPVKGTPALMVLGLYVHFNNKFIEYLDTLFMVLRHKTGQLTFLHCWHHFLMGFAWFCVLKNAAGGAAWYGSTANSFIHVIMYGYYGLRSVGVKLPTFLKAAVTQAQLLQFFLVSLQSFW--GIHDWLTTGNEVYPIWLTLLQLGVMVNMFVMFSGFYIRAY 521
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: A0A5B8MVL9_9CHLO (Fatty acid elongase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MVL9_9CHLO) HSP 1 Score: 148 bits (374), Expect = 4.380e-40 Identity = 88/242 (36.36%), Postives = 137/242 (56.61%), Query Frame = 1
Query: 4 TGLYFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNT-----GSAFGRLWGRELSARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVYLSYLHLFHTSPYPLWLALVQFAVMTFFFVLFLQFSKKKY 714
T Y LV VGP +I + F++ D M++YN YQ + N++ +G +V + ++ GS FG L FFIWLH+++K+ EF D++FMVLR+KN+QLSFLH+ HH + W W++V GD ++G+ NSF+HV+MY YY + A+ +S PWK+ +T++Q++QF+ +VYL Y+H P+ L ++Q +M+ FVLF F +KY
Sbjct: 49 TVFYLLLVTVGP-----MIMKNRKAFELKD----SMLVYNLYQVIYNSWCCYGFVREVMGKGYANKLNVWGNYDADIGSNFG-------------LGFFIWLHYNNKYLEFFDSIFMVLRKKNEQLSFLHIYHHLTIAWCWWVVTKVYCGGDSYFGALCNSFIHVLMYSYYFMAALKISCPWKRHLTKMQMIQFLTCIAHAVYL-YVH----KTVPVVLPVLQIFMMSSLFVLFFTFYMRKY 263
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: K8F909_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F909_9CHLO) HSP 1 Score: 147 bits (370), Expect = 2.660e-39 Identity = 89/251 (35.46%), Postives = 135/251 (53.78%), Query Frame = 1
Query: 10 LYFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTGSAFGRLWGRELSARDTE---LAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLV---LVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVY-LSYLHLFHTSPYPLWLALVQFAVMTFFFVLFLQFSKKKYGNNKRGHKA 741
LY +VFVGP +++ +++ F+ M++YN YQ+L N ++ + ++ + ++WG DT +A +WLH+++K+ E DT++M+LR+K Q+SFLHV HH ++ WAW++V + AP D ++G+ NSF+HVVMY YY + MGV+VPWK+ +TQLQL+QF+ V +VY L Y PY Q VM VLF F K Y N K
Sbjct: 65 LYLTMVFVGP----KIMRKRAEPFNPKAL----MLVYNVYQTLFNVYVCYLFVSEIKTNNF--------------KVWGETCRWNDTRTFGVALGVWLHYNNKYLELLDTVWMILRKKEKQVSFLHVYHHVLLVWAWWMVCWTINQAPCVDMYFGALCNSFIHVVMYSYYAMALMGVAVPWKRYITQLQLLQFMVVFCHAVYVLLYTKCLKILPYS------QMFVMANMLVLFGNFYMKSYKNTSSKRKT 287
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: A0A482SXS3_9ARCH (Elongation of very long chain fatty acids protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXS3_9ARCH) HSP 1 Score: 142 bits (359), Expect = 3.640e-37 Identity = 89/253 (35.18%), Postives = 136/253 (53.75%), Query Frame = 1
Query: 4 TGLYFALVFVGP-WLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTGSAFGRLWGREL--SARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVYLSYLHLFHTSPYPLWLALVQFAVMTFFFVLFLQFSKKKYGNNKRGHKADKKD 753
T Y A+V+ G W+ R F++ Y++ YN YQ +LN + V + ++V ++ P+F+ +WG A ++F IW+H+++K+ E DTL+M+LR+KN+Q+SFLH HH ++ WAW+LV GDC++G++ NSF+HV+MY YY + + PWKK +T Q++QF S ++ Y P+ L L Q VM VLF F K YG K+G K KD
Sbjct: 114 TFAYLAMVYFGQKWMKDR------KEFEIKPYIFT----YNLYQCILNVWCVGAMCYEVYSN------PIFSG------VWGNYAVPGAPSFRISFLIWVHYNNKYVELLDTLWMILRKKNNQISFLHCYHHVLLIWAWFLVCKVETGGDCYFGATVNSFIHVIMYGYYTMTLLNFPCPWKKWITTCQMIQFCVCFSHSCFVVY-----NGNAPIILPLAQGFVMVNMLVLFGNFYMKSYG--KKGDKKMVKD 337
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: B8C6D9_THAPS (Elongation of fatty acids protein n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6D9_THAPS) HSP 1 Score: 142 bits (358), Expect = 7.820e-37 Identity = 91/236 (38.56%), Postives = 127/236 (53.81%), Query Frame = 1
Query: 79 FDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTGSAFGRLWGRELSARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVYLSYLHLFHTS-----PYP-----LWLALVQFAVMTFFFVLFLQFSKKKYGN-NKRGHKADKKD 753
+D+ L E MVLYN Q LLN + V+ + V M + P + S G +A + ++ +W+H+ DK+ EF DT FMVLR K DQ+SFLH+ HH + WAW++ L +P GD ++G+ NS +HV+MY YY L + VS PWK+ +TQ QL+QF V + + Y H +HT P + VQ M FVLF F K+ Y NK G K KK+
Sbjct: 81 YDMKSLLTESMVLYNVAQVLLNGWTVYAIVDAV----MNRDHPFIGSRSLVG-------AALHSGSSYAVWVHYCDKYLEFFDTYFMVLRGKMDQVSFLHIYHHTTIAWAWWIALRFSPGGDIYFGALLNSIIHVLMYSYYALALLKVSCPWKRYLTQAQLLQFTSVVVYTGCTGYTHYYHTKHGADETQPSLGTYYFCCGVQVFEMVSLFVLFSIFYKRSYSKKNKSGGKDSKKN 305
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: A0A090M8Q0_OSTTA (GNS1/SUR4 membrane protein n=3 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M8Q0_OSTTA) HSP 1 Score: 140 bits (354), Expect = 8.390e-37 Identity = 93/252 (36.90%), Postives = 133/252 (52.78%), Query Frame = 1
Query: 4 TGLYFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQVAADVMGGEGPLFNTGSAFGRLWGRELSARDTE---LAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDC---FWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVYLSYLHLFHTSPYPLWLALVQFAVMTFFFVLFLQFSKKKYGNNKRGHKA 741
T +Y VGP L+A K FD + M+ YN YQ+ N +V G+ A ++ G P+ WG + D + + +WLH+++K+ E DT+FMV R+K QLSFLHV HHA++ WAW+LV T DC ++G++ NSF+H+VMY YY + A+G+ PWK+ +TQ Q++QFV V +V++ P+ L Q VMT VLF F K Y N RG A
Sbjct: 54 TTMYLLFCLVGPRLMA-----KREAFDPKGF----MLAYNAYQTAFNV-VVLGM---FAREISGLGQPV----------WGSTMPWSDRKSFKILLGVWLHYNNKYLELLDTVFMVARKKTKQLSFLHVYHHALLIWAWWLVCHLMATNDCIDAYFGAACNSFIHIVMYSYYLMSALGIRCPWKRYITQAQMLQFVIVFAHAVFV-----LRQKHCPVTLPWAQMFVMTNMLVLFGNFYLKAYSNKSRGDGA 277
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Match: A0A7S2Y6L4_9STRA (Elongation of fatty acids protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6L4_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.260e-35 Identity = 88/228 (38.60%), Postives = 123/228 (53.95%), Query Frame = 1
Query: 82 DVDDYLYEPMVLYNYYQSLLNAFMVWGLTHQV---AADVMGGEGPLFNTGSAFGRLWGRELSARDTELAFFIWLHFHDKFCEFCDTLFMVLRRKNDQLSFLHVVHHAIMPWAWYLVLVNAPTGDCFWGSSWNSFVHVVMYLYYGLRAMGVSVPWKKAVTQLQLVQFVCVALQSVYLSYLHLFHTSPYPLWLALVQFAVMTF----FFVLFLQFSKKKYGNNKRGHKAD 744
DV L E M++YN Q +LNA+MV+ H V ++GG + TG + +W+H+ DK+ E+ DT FMVLR + DQ+SFLHV HH + AW++ L P GD ++G+ NSF+HV+MY YY L + +S PWKK +TQ QL+QF V L S+ + S W + V V F FVLF+ F +K Y +K+G KAD
Sbjct: 121 DVKSLLKEAMLVYNVGQVVLNAWMVYAFVHAVWFGGHPIIGGAKDMVETGVTYA-----------------VWVHYCDKYLEYMDTYFMVLRGRMDQVSFLHVYHHTSISLAWWIGLRVYPGGDSYFGAMCNSFIHVMMYSYYALALLKISCPWKKYLTQAQLIQFTSVVL----FSFAGILSPSVEKTWESYVAHFVQDFEMISLFVLFMAFYRKAY--SKKGGKAD 325 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79455.18656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79455.18656.1 >prot_M-pyrifera_M_contig79455.18656.1 ID=prot_M-pyrifera_M_contig79455.18656.1|Name=mRNA_M-pyrifera_M_contig79455.18656.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp MTGLYFALVFVGPWLVARLIPEKSATFDVDDYLYEPMVLYNYYQSLLNAFback to top mRNA from alignment at M-pyrifera_M_contig79455:27..782- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79455.18656.1 ID=mRNA_M-pyrifera_M_contig79455.18656.1|Name=mRNA_M-pyrifera_M_contig79455.18656.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig79455:27..782- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79455:27..782- >mRNA_M-pyrifera_M_contig79455.18656.1 ID=mRNA_M-pyrifera_M_contig79455.18656.1|Name=mRNA_M-pyrifera_M_contig79455.18656.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1512bp|location=Sequence derived from alignment at M-pyrifera_M_contig79455:27..782- (Macrocystis pyrifera P11B4 male)back to top |