mRNA_M-pyrifera_M_contig7930.18618.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_M-pyrifera_M_contig7930.18618.1
Unique Name	mRNA_M-pyrifera_M_contig7930.18618.1
Type	mRNA
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))

Homology

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA)

HSP 1 Score: 669 bits (1726), Expect = 4.150e-241
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMT CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE
Sbjct:   57 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 386

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: C5IXZ2_9STRA (Tubulin alpha chain (Fragment) n=13 Tax=Sar TaxID=2698737 RepID=C5IXZ2_9STRA)

HSP 1 Score: 661 bits (1706), Expect = 3.480e-239
Identity = 320/330 (96.97%), Postives = 330/330 (100.00%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            GAGKHVPRAVYVDLEPTVCDEVR+GTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAI+P+PQV+TAVVEPYNSVLSTH+LLEHTDCTFC+DNEALYDVCRRNLDIERPTYTNLNRL+AQVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLTSYAP+ISAEKAYHEQLSV+EITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE
Sbjct:   41 GAGKHVPRAVYVDLEPTVCDEVRSGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAISPSPQVSTAVVEPYNSVLSTHSLLEHTDCTFCMDNEALYDVCRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLTSYAPVISAEKAYHEQLSVSEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 370

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: A9LGN1_9STRA (Tubulin alpha chain (Fragment) n=6 Tax=Chrysophyceae TaxID=2825 RepID=A9LGN1_9STRA)

HSP 1 Score: 645 bits (1663), Expect = 5.490e-233
Identity = 307/330 (93.03%), Postives = 325/330 (98.48%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            GAGKHVPRAV++DLEP VCDEVRTGTYRQLYHPEQ+ISGKEDAANNYARGHYTIGKEIVDLVLDR+RKLADNCTGLQGFL+FH+TGGGTGSG GSLLLERLSVDYGRKSKLSF +TPAPQVATAVVEPYN VLS+H+LLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQV+SSLTASLRFDGALNVD++EFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSV+EITNSVFEP+ M+TKCDPRHGKYMACC+MYRGDVVPKDVNAAVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAE
Sbjct:    6 GAGKHVPRAVFIDLEPGVCDEVRTGTYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDLVLDRLRKLADNCTGLQGFLIFHSTGGGTGSGFGSLLLERLSVDYGRKSKLSFTVTPAPQVATAVVEPYNHVLSSHSLLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVVSSLTASLRFDGALNVDISEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVSEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAE 335

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: A7KCB8_9SPIT (Tubulin alpha chain (Fragment) n=1 Tax=Protocruzia contrax TaxID=346242 RepID=A7KCB8_9SPIT)

HSP 1 Score: 641 bits (1653), Expect = 1.580e-231
Identity = 310/333 (93.09%), Postives = 323/333 (97.00%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEVGS 999
            GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGF+ +HATGGGTGSGLGSLLLERLSVDYGRKSK+SFAITPAPQVA AVVEPYNSVLSTHALLEHTD TFC+DNEALYDVCRRNLDIERPTYTNLNRL+AQ+ SSLTASLRFDG LNVD+TEFQTNLVPYPRIHFML SYAP+ISAEK YHEQLSVAEITNSVFEPA M+TKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCM++N+TAIAEV S
Sbjct:   11 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFMCYHATGGGTGSGLGSLLLERLSVDYGRKSKISFAITPAPQVANAVVEPYNSVLSTHALLEHTDVTFCMDNEALYDVCRRNLDIERPTYTNLNRLLAQIGSSLTASLRFDGVLNVDITEFQTNLVPYPRIHFMLASYAPVISAEKVYHEQLSVAEITNSVFEPASMVTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFS 343

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: B3SHS1_9STRA (Tubulin alpha chain (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=B3SHS1_9STRA)

HSP 1 Score: 641 bits (1653), Expect = 3.710e-231
Identity = 310/330 (93.94%), Postives = 320/330 (96.97%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            GAGKHVPRAVYVDLEPTVCDE+RTGTYRQL+HPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFL FHATGGGTGSGLGSLLLERLSVDYGR SKLSF I+PAPQ++ AVVEPYNSVLSTHALLEHTD TF LDNEALYDVCRRNLDIERPTYTNLNRL AQV SSLTASLRFDGALNVD+TEFQTNLVPYPRIHFMLTSYAP+ISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVN++VATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARV RAVCMVANTTA+ E
Sbjct:   36 GAGKHVPRAVYVDLEPTVCDEIRTGTYRQLFHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLAFHATGGGTGSGLGSLLLERLSVDYGRNSKLSFCISPAPQISNAVVEPYNSVLSTHALLEHTDVTFALDNEALYDVCRRNLDIERPTYTNLNRLFAQVASSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLTSYAPVISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNSSVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVMRAVCMVANTTAVGE 365

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: A0A7S2A4A3_9STRA (Tubulin alpha chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A4A3_9STRA)

HSP 1 Score: 641 bits (1654), Expect = 7.630e-231
Identity = 310/330 (93.94%), Postives = 323/330 (97.88%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            G GKHVPRAVYVDLEPTVCDEVR G YRQLYHPEQIISGKEDAANNYARGHYTIGKEIVD VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+P+V+TAVVEPYN VLSTHALLEHTDCTFCLDNEALYDVCR+NLDI+RPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS+EKA+HEQLSVAEIT SVFEP GMMT+CDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCMVANTTA+AE
Sbjct:   14 GNGKHVPRAVYVDLEPTVCDEVRAGAYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDDVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPEVSTAVVEPYNYVLSTHALLEHTDCTFCLDNEALYDVCRKNLDIDRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSEKAFHEQLSVAEITASVFEPGGMMTRCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMVANTTAVAE 343

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: B6VA48_9STRA (Tubulin alpha chain (Fragment) n=6 Tax=Stramenopiles TaxID=33634 RepID=B6VA48_9STRA)

HSP 1 Score: 636 bits (1641), Expect = 1.930e-229
Identity = 306/330 (92.73%), Postives = 321/330 (97.27%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHP+QIISGKEDAANNYARGHYT+GKEIVD VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSF ITPAPQVATAVVEPYN VLSTH+LLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRL+AQVISSLTASLRFDGALNVD+ EFQTNLVPYPRIHFMLTSYAP+ISA KA HE L+VA++TN+VFEP+ MMTKCDPRHGKYMACCLMYRGD+VPKDV+AAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGD+ARV RA+CMVANTTAIAE
Sbjct:   28 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPDQIISGKEDAANNYARGHYTVGKEIVDQVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFTITPAPQVATAVVEPYNHVLSTHSLLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDMNEFQTNLVPYPRIHFMLTSYAPVISAAKAQHEALTVADLTNAVFEPSNMMTKCDPRHGKYMACCLMYRGDIVPKDVSAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDVARVPRALCMVANTTAIAE 357

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: A0A060N0E4_9STRA (Tubulin alpha chain (Fragment) n=1 Tax=Asterionella glacialis TaxID=35130 RepID=A0A060N0E4_9STRA)

HSP 1 Score: 634 bits (1635), Expect = 1.840e-228
Identity = 304/328 (92.68%), Postives = 319/328 (97.26%), Query Frame = 1

Query:    7 GKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            G+HVPRA+YVDLEPTVCDEVRTG YR LYHPEQII+GKEDAANNYARGHYT GKEIVD VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNL IERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAP++SAEK+ HE LSVAEITNSVFEPA MMTKCDPRHGKYMACCLM+RGD+VPKDVNAAVAT+KTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA V+RAVCMVANTTAIAE
Sbjct:   30 GRHVPRAIYVDLEPTVCDEVRTGAYRSLYHPEQIINGKEDAANNYARGHYTTGKEIVDRVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLGIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPVVSAEKSQHENLSVAEITNSVFEPANMMTKCDPRHGKYMACCLMFRGDIVPKDVNAAVATVKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAEVKRAVCMVANTTAIAE 357

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BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: A0A7S1GLI0_CYCTE (Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1GLI0_CYCTE)

HSP 1 Score: 635 bits (1639), Expect = 2.430e-227
Identity = 309/330 (93.64%), Postives = 320/330 (96.97%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            G+GKHVPRAVYVDLEPTVCDEVR G+YRQLYHPEQII+GKEDAANNYARGHYT GKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNL IERPTYTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS  KA+HEQLSVAEITNSVFEP  MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT+KTKRTIQFVDWCPTGFKCGINYQ PT VPGGDLA V+RAVCMVANTTAIAE
Sbjct:   92 GSGKHVPRAVYVDLEPTVCDEVRHGSYRQLYHPEQIINGKEDAANNYARGHYTTGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLGIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISQAKAHHEQLSVAEITNSVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATVKTKRTIQFVDWCPTGFKCGINYQAPTPVPGGDLATVKRAVCMVANTTAIAE 421

[Close]

BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Match: A0A7S0Q113_9EUKA (Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q113_9EUKA)

HSP 1 Score: 633 bits (1632), Expect = 8.560e-227
Identity = 301/330 (91.21%), Postives = 321/330 (97.27%), Query Frame = 1

Query:    1 GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAE 990
            GAGKHVPR + VDLEPTV DE+RTG+YR L+HPEQ+ISGKEDAANNYARGHYT+GKEIVDLVLDRIRKLADNCTGLQGF++FHATGGGTGSG GSLLLERLSVDYGRKSKLSF +TPAPQVATAVVEPYN VLS+HALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRL+AQV+SSLTASLRFDGALNVD++EFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSV EITNSVFEP+ M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAE
Sbjct:   57 GAGKHVPRCLMVDLEPTVVDEIRTGSYRHLFHPEQLISGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADNCTGLQGFMIFHATGGGTGSGFGSLLLERLSVDYGRKSKLSFTVTPAPQVATAVVEPYNHVLSSHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVVSSLTASLRFDGALNVDLSEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAE 386

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig7930.18618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
TBA2_PELFA	4.150e-241	99.70	Tubulin alpha-2 chain n=45 Tax=cellular organisms ...	[more]
C5IXZ2_9STRA	3.480e-239	96.97	Tubulin alpha chain (Fragment) n=13 Tax=Sar TaxID=...	[more]
A9LGN1_9STRA	5.490e-233	93.03	Tubulin alpha chain (Fragment) n=6 Tax=Chrysophyce...	[more]
A7KCB8_9SPIT	1.580e-231	93.09	Tubulin alpha chain (Fragment) n=1 Tax=Protocruzia...	[more]
B3SHS1_9STRA	3.710e-231	93.94	Tubulin alpha chain (Fragment) n=1 Tax=Pelagomonas...	[more]
A0A7S2A4A3_9STRA	7.630e-231	93.94	Tubulin alpha chain n=1 Tax=Ditylum brightwellii T...	[more]
B6VA48_9STRA	1.930e-229	92.73	Tubulin alpha chain (Fragment) n=6 Tax=Stramenopil...	[more]
A0A060N0E4_9STRA	1.840e-228	92.68	Tubulin alpha chain (Fragment) n=1 Tax=Asterionell...	[more]
A0A7S1GLI0_CYCTE	2.430e-227	93.64	Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=...	[more]
A0A7S0Q113_9EUKA	8.560e-227	91.21	Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig7930	contig	M-pyrifera_M_contig7930:640..1638 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	672.2
Seed ortholog evalue	1.3e-190
Seed eggNOG ortholog	2880.D7G923
KEGG ko	ko:K07374
KEGG Pathway	ko04145,ko04210,ko04530,ko04540,ko05130,map04145,map04210,map04530,map04540,map05130
Hectar predicted targeting category	other localisation
EggNOG free text desc.	structural constituent of cytoskeleton
EggNOG OGs	COG5023@1,KOG1376@2759
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03019,ko03036,ko04147,ko04812
Exons	1
Model size	999
Cds size	999
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816696.3016338-CDS-M-pyrifera_M_contig7930:639..1638	1622816696.3016338-CDS-M-pyrifera_M_contig7930:639..1638	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig7930 640..1638 -
1692278125.0714064-CDS-M-pyrifera_M_contig7930:639..1638	1692278125.0714064-CDS-M-pyrifera_M_contig7930:639..1638	Macrocystis pyrifera P11B4 male	CDS	M-pyrifera_M_contig7930 640..1638 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig7930.18618.1	prot_M-pyrifera_M_contig7930.18618.1	Macrocystis pyrifera P11B4 male	polypeptide	M-pyrifera_M_contig7930 640..1638 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at M-pyrifera_M_contig7930:640..1638-
coding sequence from alignment at M-pyrifera_M_contig7930:640..1638-

protein sequence of mRNA_M-pyrifera_M_contig7930.18618.1

>prot_M-pyrifera_M_contig7930.18618.1 ID=prot_M-pyrifera_M_contig7930.18618.1|Name=mRNA_M-pyrifera_M_contig7930.18618.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=333bp
GAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARG
HYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLER
LSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDN
EALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQ
TNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTKCD
PRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGIN
YQPPTVVPGGDLARVQRAVCMVANTTAIAEVGS

mRNA from alignment at M-pyrifera_M_contig7930:640..1638-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_M-pyrifera_M_contig7930.18618.1 ID=mRNA_M-pyrifera_M_contig7930.18618.1|Name=mRNA_M-pyrifera_M_contig7930.18618.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=999bp|location=Sequence derived from alignment at M-pyrifera_M_contig7930:640..1638- (Macrocystis pyrifera P11B4 male)
GGCGCCGGCAAGCACGTGCCTCGCGCGGTGTACGTGGACCTGGAGCCCAC
GGTGTGCGACGAGGTTCGCACCGGCACTTACCGCCAGCTTTACCACCCGG
AACAGATCATCTCGGGCAAGGAGGACGCGGCCAACAACTACGCCCGCGGG
CACTACACCATCGGCAAGGAGATCGTGGACCTCGTGCTAGACCGCATCCG
CAAGCTGGCGGACAACTGCACGGGGCTGCAGGGCTTCCTGGTGTTCCACG
CGACCGGAGGCGGGACCGGGTCGGGCCTGGGATCTCTGCTCCTGGAGCGT
CTGTCGGTGGACTACGGCCGCAAGTCCAAGCTGTCCTTCGCCATCACGCC
CGCTCCGCAGGTGGCGACGGCGGTGGTGGAGCCGTACAACTCTGTGCTGT
CGACGCACGCTCTGCTGGAGCACACGGACTGCACGTTCTGCCTGGACAAC
GAGGCGCTGTACGACGTGTGCCGCCGCAACCTGGACATCGAGCGGCCCAC
GTACACCAACCTGAACCGCCTGGTGGCGCAGGTGATCTCGTCGCTGACGG
CCTCGCTGCGCTTCGACGGCGCCCTGAACGTGGACGTGACGGAGTTCCAG
ACCAACCTGGTGCCGTACCCCCGCATCCACTTCATGCTCACGTCGTACGC
GCCCATCATCTCGGCGGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCCG
AGATCACCAACTCGGTGTTCGAGCCCGCCGGCATGATGACCAAGTGCGAC
CCCCGCCACGGCAAGTACATGGCGTGCTGTCTCATGTACCGCGGCGACGT
GGTGCCCAAGGACGTCAACGCCGCCGTGGCCACCATCAAGACCAAGCGCA
CCATCCAGTTCGTCGACTGGTGCCCCACGGGCTTCAAGTGCGGCATCAAC
TACCAGCCGCCTACGGTCGTGCCCGGCGGGGACCTCGCCCGCGTGCAGCG
CGCCGTGTGCATGGTGGCCAACACCACCGCTATCGCCGAGGTAGGCAGT

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7930:640..1638-

>mRNA_M-pyrifera_M_contig7930.18618.1 ID=mRNA_M-pyrifera_M_contig7930.18618.1|Name=mRNA_M-pyrifera_M_contig7930.18618.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1998bp|location=Sequence derived from alignment at M-pyrifera_M_contig7930:640..1638- (Macrocystis pyrifera P11B4 male)
GGCGCCGGCAAGCACGTGCCTCGCGCGGTGTACGTGGACCTGGAGCCCAC
GGTGTGCGACGAGGTTCGCACCGGCACTTACCGCCAGCTTTACCACCCGG
AACAGATCATCTCGGGCAAGGAGGACGCGGCCAACAACTACGCCCGCGGG
CACTACACCATCGGCAAGGAGATCGTGGACCTCGTGCTAGACCGCATCCG
CAAGCTGGCGGACAACTGCACGGGGCTGCAGGGCTTCCTGGTGTTCCACG
CGACCGGAGGCGGGACCGGGTCGGGCCTGGGATCTCTGCTCCTGGAGCGT
CTGTCGGTGGACTACGGCCGCAAGTCCAAGCTGTCCTTCGCCATCACGCC
CGCTCCGCAGGTGGCGACGGCGGTGGTGGAGCCGTACAACTCTGTGCTGT
CGACGCACGCTCTGCTGGAGCACACGGACTGCACGTTCTGCCTGGACAAC
GAGGCGCTGTACGACGTGTGCCGCCGCAACCTGGACATCGAGCGGCCCAC
GTACACCAACCTGAACCGCCTGGTGGCGCAGGTGATCTCGTCGCTGACGG
CCTCGCTGCGCTTCGACGGCGCCCTGAACGTGGACGTGACGGAGTTCCAG
ACCAACCTGGTGCCGTACCCCCGCATCCACTTCATGCTCACGTCGTACGC
GCCCATCATCTCGGCGGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCCG
AGATCACCAACTCGGTGTTCGAGCCCGCCGGCATGATGACCAAGTGCGAC
CCCCGCCACGGCAAGTACATGGCGTGCTGTCTCATGTACCGCGGCGACGT
GGTGCCCAAGGACGTCAACGCCGCCGTGGCCACCATCAAGACCAAGCGCA
CCATCCAGTTCGTCGACTGGTGCCCCACGGGCTTCAAGTGCGGCATCAAC
TACCAGCCGCCTACGGTCGTGCCCGGCGGGGACCTCGCCCGCGTGCAGCG
CGCCGTGTGCATGGTGGCCAACACCACCGCTATCGCCGAGGTAGGCAGTG
GCGCCGGCAAGCACGTGCCTCGCGCGGTGTACGTGGACCTGGAGCCCACG
GTGTGCGACGAGGTTCGCACCGGCACTTACCGCCAGCTTTACCACCCGGA
ACAGATCATCTCGGGCAAGGAGGACGCGGCCAACAACTACGCCCGCGGGC
ACTACACCATCGGCAAGGAGATCGTGGACCTCGTGCTAGACCGCATCCGC
AAGCTGGCGGACAACTGCACGGGGCTGCAGGGCTTCCTGGTGTTCCACGC
GACCGGAGGCGGGACCGGGTCGGGCCTGGGATCTCTGCTCCTGGAGCGTC
TGTCGGTGGACTACGGCCGCAAGTCCAAGCTGTCCTTCGCCATCACGCCC
GCTCCGCAGGTGGCGACGGCGGTGGTGGAGCCGTACAACTCTGTGCTGTC
GACGCACGCTCTGCTGGAGCACACGGACTGCACGTTCTGCCTGGACAACG
AGGCGCTGTACGACGTGTGCCGCCGCAACCTGGACATCGAGCGGCCCACG
TACACCAACCTGAACCGCCTGGTGGCGCAGGTGATCTCGTCGCTGACGGC
CTCGCTGCGCTTCGACGGCGCCCTGAACGTGGACGTGACGGAGTTCCAGA
CCAACCTGGTGCCGTACCCCCGCATCCACTTCATGCTCACGTCGTACGCG
CCCATCATCTCGGCGGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCCGA
GATCACCAACTCGGTGTTCGAGCCCGCCGGCATGATGACCAAGTGCGACC
CCCGCCACGGCAAGTACATGGCGTGCTGTCTCATGTACCGCGGCGACGTG
GTGCCCAAGGACGTCAACGCCGCCGTGGCCACCATCAAGACCAAGCGCAC
CATCCAGTTCGTCGACTGGTGCCCCACGGGCTTCAAGTGCGGCATCAACT
ACCAGCCGCCTACGGTCGTGCCCGGCGGGGACCTCGCCCGCGTGCAGCGC
GCCGTGTGCATGGTGGCCAACACCACCGCTATCGCCGAGGTAGGCAGT