mRNA_M-pyrifera_M_contig79277.18612.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: A0A5A8ELV4_CAFRO (CNNM transmembrane domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ELV4_CAFRO) HSP 1 Score: 125 bits (313), Expect = 4.330e-31 Identity = 64/105 (60.95%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 28 GVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 G+SV L++ AG M+GLTMG+VS+D T++EI+++ GT AQ+R+A+ + FV+ HHLTLV LLL NA ANE LP+FLD L+ I AIV+SVTAVL+FGEILP+A+ T Sbjct: 57 GISVALIITAGLMAGLTMGVVSMDATYVEILARTGTKAQKRQAKALAPFVKRHHLTLVTLLLANASANEMLPIFLDSLLDPIMAIVLSVTAVLIFGEILPSAVFT 161
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: F2U9P1_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U9P1_SALR5) HSP 1 Score: 121 bits (303), Expect = 3.340e-30 Identity = 61/105 (58.10%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 28 GVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 G+S LVL+AG SGLT+G++SLD T ++++S+AG P +Q+ ARR++ V+ HHL LV LLL NA NE+LPLFLD LV E AI+ISVTAVL+FGE++P A+C+ Sbjct: 41 GISAALVLLAGVFSGLTLGLLSLDSTQLQVLSEAGKPEEQKYARRIKPLVKRHHLLLVTLLLANAAVNESLPLFLDDLVPEYIAIIISVTAVLMFGEVIPQALCS 145
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: H2Y1N6_CIOIN (CNNM transmembrane domain-containing protein n=3 Tax=Ciona intestinalis TaxID=7719 RepID=H2Y1N6_CIOIN) HSP 1 Score: 113 bits (282), Expect = 1.080e-28 Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 22 FAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 + G+ V LVL+AG MSGLTMG++SLD + ++S G P +Q+ A+R+ V+ HHL LV LLL NA A E++PLFLD + ITAIV+SVTAVL+FGE++P A+CT Sbjct: 38 YLGIYVALVLIAGLMSGLTMGLLSLDLMSLTVLSTDGKPNEQKHAKRILPLVKRHHLLLVTLLLSNAAAVESMPLFLDKISNPITAIVVSVTAVLIFGEVVPQALCT 144
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: UPI0014582F5D (LOW QUALITY PROTEIN: DUF21 domain-containing protein At1g47330-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014582F5D) HSP 1 Score: 115 bits (289), Expect = 5.030e-28 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 22 FAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 + G+ VGLVLMAG SGLTMG++SLD +++M GTP +++ A+++ V HHL LV LLLGNA A E++P+FLD + + AIV+SVTAVL+FGE++P AICT Sbjct: 37 YLGIYVGLVLMAGMXSGLTMGLLSLDLMSLKVMKDGGTPKERKHAKKILPLVSRHHLLLVTLLLGNAAAVESMPIFLDKISNPVAAIVVSVTAVLIFGEVIPQAICT 143
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: UPI0006B0AD8B (DUF21 domain-containing protein At4g33700-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0AD8B) HSP 1 Score: 109 bits (273), Expect = 5.680e-28 Identity = 56/107 (52.34%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 22 FAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 + GV V LVL+AG MSGLTMG++S+D T + ++ + G P +++ A + VE HHL LV L+ GNA A EA+PLFLD + ITA+V+SVTAVL+ GE++P A+CT Sbjct: 38 YIGVYVALVLVAGLMSGLTMGLLSMDITSLRVLEREGKPQEKKNAHTIIPLVEKHHLLLVTLIFGNAAAVEAMPLFLDRVSNPITAVVVSVTAVLLVGEVIPQALCT 144
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: A0A7S0WQE1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WQE1_9CHLO) HSP 1 Score: 113 bits (282), Expect = 7.670e-28 Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 28 GVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 G SV L LMAG MSGLT+G++SLD T +E++ ++GT ++R AR++ +E+ H LV LLL NALA EALPLFLD L +TAI+++VTAVL FGEI+P A+CT Sbjct: 36 GTSVMLTLMAGLMSGLTLGLMSLDMTQMEVLRRSGTDKEKRYARKILPLIENSHFLLVTLLLCNALAMEALPLFLDRLANPVTAIILAVTAVLFFGEIIPQAVCT 140
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: A0A2P6N8I7_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N8I7_9EUKA) HSP 1 Score: 114 bits (286), Expect = 7.770e-28 Identity = 61/106 (57.55%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 22 FAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAIC 339 F G+S+GLVL+AG MSGLT+G++SLD ++I+ ++GTP Q++ A R+ +++HH LV LLL N+ A EALP+FLD LV E AI ISVTAVL+FGEI+P AIC Sbjct: 62 FIGISIGLVLVAGLMSGLTLGLMSLDRMNLQILIQSGTPHQKKHAGRILPLLDYHHWLLVTLLLCNSAAMEALPIFLDKLVSEYIAIAISVTAVLLFGEIIPQAIC 167
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: A0A7D9LXL5_PARCT (DUF21 domain-containing At4g33700 isoform X2 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LXL5_PARCT) HSP 1 Score: 108 bits (270), Expect = 1.200e-27 Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 22 FAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 + GV VGLVL AG MSGLTMG++SLD ++++++ G P +Q+ A ++ V HHL LV LLL NA+A E++PL LD + + AIV+SVTAVL+FGE++P A+CT Sbjct: 55 YLGVYVGLVLFAGLMSGLTMGLLSLDILSLKVLARGGKPDEQKHAAKIIPLVSQHHLLLVTLLLANAVAVESMPLCLDRVSNPVVAIVVSVTAVLLFGEVVPQALCT 161
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: A0A8J1TCH5_OWEFU (Ofus.G021764 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TCH5_OWEFU) HSP 1 Score: 113 bits (283), Expect = 3.570e-27 Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 22 FAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 + G+ LVL AG MSGLTMG++SLDPT I ++ +GTP +++ A R+ V+ HHL LV LLL NA A E++PLFLD + +TAIV+SV+AVL+FGE+ P A+CT Sbjct: 71 YLGIYTALVLFAGLMSGLTMGLLSLDPTNIRVLMGSGTPQERKYAARILPLVQRHHLLLVTLLLANAAAVESMPLFLDKISNPVTAIVVSVSAVLLFGEVFPQALCT 177
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Match: K1QWS8_CRAGI (Metal transporter CNNM2 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1QWS8_CRAGI) HSP 1 Score: 112 bits (281), Expect = 4.580e-27 Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 22 FAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQREARRVRWFVEHHHLTLVALLLGNALANEALPLFLDHLVGEITAIVISVTAVLVFGEILPAAICT 342 + G+ VGLVL+AG TMG++SLD ++IM + GTP QQR+AR++ V+ HHL LV LLL NA A EA+P+FLD + + AIV+SVTAVL+FGE++P AICT Sbjct: 37 YLGIYVGLVLVAGXXXXXTMGLLSLDLMTLQIMKEGGTPKQQRQARKILPIVKRHHLLLVTLLLANAGAVEAMPIFLDRISSPVIAIVVSVTAVLIFGEVVPQAICT 143 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79277.18612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig79277.18612.1 >prot_M-pyrifera_M_contig79277.18612.1 ID=prot_M-pyrifera_M_contig79277.18612.1|Name=mRNA_M-pyrifera_M_contig79277.18612.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp NILLVVSFAGVSVGLVLMAGAMSGLTMGMVSLDPTFIEIMSKAGTPAQQRback to top mRNA from alignment at M-pyrifera_M_contig79277:13..354- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig79277.18612.1 ID=mRNA_M-pyrifera_M_contig79277.18612.1|Name=mRNA_M-pyrifera_M_contig79277.18612.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig79277:13..354- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig79277:13..354- >mRNA_M-pyrifera_M_contig79277.18612.1 ID=mRNA_M-pyrifera_M_contig79277.18612.1|Name=mRNA_M-pyrifera_M_contig79277.18612.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig79277:13..354- (Macrocystis pyrifera P11B4 male)back to top |