mRNA_M-pyrifera_M_contig79225.18597.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig79225.18597.1
Unique NamemRNA_M-pyrifera_M_contig79225.18597.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A7C2B3J7_9BACT (DNA translocase FtsK n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2B3J7_9BACT)

HSP 1 Score: 339 bits (869), Expect = 1.580e-106
Identity = 177/256 (69.14%), Postives = 205/256 (80.08%), Query Frame = 1
Query:  208 PRPDRKKPAIKASSAPIATL--EPVTPPAGPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            P P  KKP     +A  AT+  EP TPP GPWKLPP+ LL       +     +E QAS+LENALS+F V A VVGA+VGPA+T+FELEV  GTRMNKVTQL+QEIA ALRAKSVRIIAPIPGR+T+GIE+PN+ R  V +  LV Q AYD    ALPLFLGMDAEG  I+ DLA+MPHLLIAGTTGSGKSVCINTILAS+LLTRSPH+VQ +L+DPKMVE+QMF++VPH+M+PVV+D RQATNVLLWACEKMEGR
Sbjct:  332 PEPAAKKPRKPVRAAAQATMPFEPPTPPPGPWKLPPMDLLSPPHQAGADDVGAIENQASRLENALSAFNVSAQVVGAQVGPAVTMFELEVEQGTRMNKVTQLSQEIAAALRAKSVRIIAPIPGRATIGIEVPNEKRRTVRISELVSQRAYDKSFAALPLFLGMDAEGNAIIEDLARMPHLLIAGTTGSGKSVCINTILASLLLTRSPHDVQLILVDPKMVEMQMFSNVPHLMLPVVSDMRQATNVLLWACEKMEGR 587          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A2D5AWN6_9BACT (DNA translocase FtsK n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AWN6_9BACT)

HSP 1 Score: 335 bits (860), Expect = 4.510e-105
Identity = 173/250 (69.20%), Postives = 202/250 (80.80%), Query Frame = 1
Query:  220 RKKPAIKASSAPIATLEPVTPPAGPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            R K  ++ + A     EP TPP G W+LP L +LE     +     +LE QA++LEN L+SFKV+A VVGA+VGPA+TLFELEV  GTRMNKVTQL+QEIA ALRAK VRIIAPIPGR+T+GIE+PN+ R +V L  L+ QDAYD K  ALPLFLGMDAEG  IV DLA+MPHLLIAGTTGSGKSVCIN ILAS LLTRSPH+VQ +L+DPKMVELQMF++VPH+M+PVV+D RQATNVLLWACEKMEGR
Sbjct:  351 RGKKRVQTAPAQTQIYEPPTPPPGDWELPSLEILEPPSAHSQEDNRKLEIQANRLENVLASFKVEARVVGAKVGPAVTLFELEVVQGTRMNKVTQLSQEIAAALRAKGVRIIAPIPGRATIGIEVPNEHRRLVLLSELITQDAYDKKHMALPLFLGMDAEGNAIVEDLARMPHLLIAGTTGSGKSVCINCILASFLLTRSPHDVQLILVDPKMVELQMFSTVPHLMLPVVSDMRQATNVLLWACEKMEGR 600          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A7Y4WJ71_9BACT (DNA translocase FtsK n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WJ71_9BACT)

HSP 1 Score: 333 bits (853), Expect = 6.850e-104
Identity = 177/250 (70.80%), Postives = 203/250 (81.20%), Query Frame = 1
Query:  220 RKKPAIKASSAPIATLEPVTPPAGPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            R +PA  A     ATLEP TPP G WKLPPL LLE ++  +   E  +E QA +LENAL SF+V+A VV A+VGPA+TL+ELEVA GTR+NKVTQL+QEIA ALRAKSVRIIAPIPG+ST+GIE+PN+ R VV L  LV Q AYD K  ALPLFLGMDAEG  IV DL++MPHLLIAGTTGSGKSVCIN IL S+LLTRSPH+VQ +L+DPKMVELQMF  VPHMM+PVV+D RQATNVLLWA +KMEGR
Sbjct:  364 RVRPAAHA-----ATLEPPTPPLGDWKLPPLELLEPSRPTSPDDERVIEAQARRLENALRSFRVEASVVAAKVGPAVTLYELEVAQGTRLNKVTQLSQEIAAALRAKSVRIIAPIPGKSTIGIEVPNEKRRVVRLSELVTQKAYDKKFMALPLFLGMDAEGDAIVEDLSRMPHLLIAGTTGSGKSVCINGILVSLLLTRSPHDVQLILVDPKMVELQMFAQVPHMMLPVVSDMRQATNVLLWAVDKMEGR 608          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A2D6HJV3_9BACT (DNA translocase FtsK n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJV3_9BACT)

HSP 1 Score: 325 bits (834), Expect = 2.110e-101
Identity = 175/258 (67.83%), Postives = 205/258 (79.46%), Query Frame = 1
Query:  202 VRPRPDRKKPAIKASSAPIATL--EPVTPPAGPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            V P P R+  A + SS  + TL  E  TPP GPW  PPL LL+ A GG+ A   +L+  A+KLEN L SFKV++ VVGA+VGPA+TLFEL VA GTRMN VT L+QEI  AL+A+SVRIIAPIPGRST+GIE+PNK R +V LR L+ + AYD     LPLFLGMDAEGTP+V DL++MPHLLIAGTTGSGKSVCINTILAS+LLTRSPH+VQ VL+DPKMVELQMF  VPH+++PVVTDARQA+NVL W  EKMEGR
Sbjct:  325 VVPAPRRRGRA-EVSSVTVGTLSYETPTPPRGPWTFPPLELLK-APGGSEAVADDLKVAATKLENVLRSFKVESEVVGAQVGPAVTLFELTVAQGTRMNSVTNLSQEITAALKAQSVRIIAPIPGRSTIGIEVPNKKRRIVRLRELIHKRAYDRSFMPLPLFLGMDAEGTPVVEDLSRMPHLLIAGTTGSGKSVCINTILASLLLTRSPHDVQMVLVDPKMVELQMFAKVPHLLLPVVTDARQASNVLNWLVEKMEGR 580          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A7C8D2U2_9BACT (DNA translocase FtsK n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8D2U2_9BACT)

HSP 1 Score: 321 bits (822), Expect = 1.570e-99
Identity = 161/231 (69.70%), Postives = 190/231 (82.25%), Query Frame = 1
Query:  277 TPPAGPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            +PP GPW+ PPL LLE    G    ++ L++ ASKLE+AL SF+VDA VV A+VGPA+T+FEL V  GTRMNKVT L+QEIA AL+AKSVRIIAPIPGRST+G+E+PNK+R  V LR L+ + AYD K  ALPLFLGMD+EG P+V +LA MPHLLIAGTTGSGKSVCINTILAS+LLTRSPH+VQ VL+DPKMVEL  +  VPH+M+PVVTDAR+AT VL W CEKMEGR
Sbjct:  365 SPPKGPWQFPPLDLLENPMAGVGVEDATLQKMASKLEHALKSFRVDAEVVSAQVGPAVTMFELTVEQGTRMNKVTALSQEIAAALQAKSVRIIAPIPGRSTIGVEVPNKARRTVRLRELINKKAYDAKHAALPLFLGMDSEGKPVVENLASMPHLLIAGTTGSGKSVCINTILASLLLTRSPHDVQMVLVDPKMVELMTYAKVPHLMLPVVTDARKATAVLEWLCEKMEGR 595          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A2E5X6C1_9BACT (FtsK domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X6C1_9BACT)

HSP 1 Score: 319 bits (817), Expect = 6.300e-99
Identity = 170/252 (67.46%), Postives = 194/252 (76.98%), Query Frame = 1
Query:  214 PDRKKPAIKASSAPIATLEPVTPPAGPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            P   +P  K   AP A  EP  PP G W LP L LL+  KG    +E  LE  A  LENAL SF+V+A VVGA+VGPA+TLFEL VA GTRMNKVTQL+QEIA  L+AKSVRIIAPIPG+STVGIE+PN  R  V +R L+ Q AYD    ALPLFLGMDAEG  IV DLA+MPHLLIAGTTGSGKSVCINTIL S+LLTRSPH+V+ +L+DPKMVELQ+F+ +PHMM+P+VTD RQATNVLLW  EKME R
Sbjct:  328 PAAARPKSKPVPAP-AFQEPPAPPPGDWTLPSLDLLKTPKGSVKGNEPFLERSARSLENALKSFRVEAEVVGAQVGPAVTLFELTVAQGTRMNKVTQLSQEIAATLKAKSVRIIAPIPGKSTVGIEVPNSERRTVRIRELISQKAYDKGHMALPLFLGMDAEGHAIVEDLARMPHLLIAGTTGSGKSVCINTILVSLLLTRSPHDVKLILVDPKMVELQIFSDMPHMMLPLVTDMRQATNVLLWVVEKMESR 578          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A518D447_9BACT (DNA translocase FtsK n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D447_9BACT)

HSP 1 Score: 319 bits (817), Expect = 2.900e-98
Identity = 162/252 (64.29%), Postives = 202/252 (80.16%), Query Frame = 1
Query:  220 RKKPAIKASSAPIATLEPVTPPAGPWKLPPLSLL--EEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            +KK A KAS   +   +P TPP GPWK PPL LL   ++    S ++ E+E +A +LE  L+SF+V+A VVG+ VGP +TL+ELEVA GTR+NKVTQL+ EIA ALRAKS+R+IAPIPGRSTVG+E+PN  R++V    L+ ++AYD K YALP+FLGMDAEG P+V DLA+MPHLLIAG TGSGKSVCINTI+AS++LTRSPH+VQ ++IDPKMVELQMF+++PH M PVVTD + ATNVL WACEKME R
Sbjct:  404 KKKLAFKASEPKV--YDPPTPPKGPWKFPPLDLLIPPDSSRANSRTQEEIETEARRLEQQLASFRVEATVVGSTVGPVVTLYELEVAEGTRLNKVTQLSNEIAAALRAKSIRVIAPIPGRSTVGVEVPNAKRSLVRFSELITKEAYDPKHYALPMFLGMDAEGNPVVEDLARMPHLLIAGQTGSGKSVCINTIIASLMLTRSPHDVQTIMIDPKMVELQMFSNIPHQMCPVVTDMKYATNVLEWACEKMEMR 653          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A518BRT7_9BACT (DNA translocase FtsK n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BRT7_9BACT)

HSP 1 Score: 315 bits (807), Expect = 7.260e-97
Identity = 164/254 (64.57%), Postives = 203/254 (79.92%), Query Frame = 1
Query:  220 RKKPAIKASSAPIAT-LEPVTPPAGPWKLPPLSLLEEAKGGASASES---ELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            +KKP     +API+   +P TPP GPWK PPL LLE     +  +E    ++E QA KLENAL SF+V+A+VVG+ +GP++T+FELEVA GTRMN+VT L+ EIA AL+A+SVRIIAPIPGRST+GIE+PN +R +V    L+ ++AYD K  ALPLFLGMDAEG PIV DLA+MPHLLIAG TG+GKSVCINTI+AS+LLTR+PHEVQ +++DPKMVEL M+++VPH M PVVTD + ATNVLLWA EKMEGR
Sbjct:  399 KKKPTF---NAPISLPFDPPTPPPGPWKFPPLDLLEPPSVNSGVTEEARGKIEAQAEKLENALRSFRVEANVVGSTIGPSVTMFELEVAQGTRMNRVTTLSSEIAAALKARSVRIIAPIPGRSTIGIEVPNGARRLVRFSELICKEAYDPKFAALPLFLGMDAEGNPIVEDLARMPHLLIAGQTGAGKSVCINTIIASLLLTRTPHEVQMIMVDPKMVELAMYSNVPHQMCPVVTDMKHATNVLLWAVEKMEGR 649          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A521KHT4_9BACT (DNA translocase FtsK (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KHT4_9BACT)

HSP 1 Score: 307 bits (786), Expect = 3.820e-94
Identity = 154/227 (67.84%), Postives = 183/227 (80.62%), Query Frame = 1
Query:  289 GPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            GPWK PP  LLE      +  E ++E QA +LE AL+SF+V+A VVGA+VGP +TLFELEV+ GTR+NKVTQL+ EIA  LRA+SVRIIAPIPG++T+G+E+PN  R VV +  LV Q AYD ++ ALP FLGMD EG P+V DLAKMPHLLIAGTTGSGKSVCINTILAS+LLTRSPH+ + +LIDPK VEL MF SVPH+M+PVVTD + AT VLLWA EKMEGR
Sbjct:  374 GPWKFPPPELLEPPTRQTADDEKQIEAQARRLEQALASFRVEAQVVGAKVGPTVTLFELEVSQGTRLNKVTQLSSEIAATLRARSVRIIAPIPGKATIGVEVPNSGRRVVRISELVTQKAYDTRQIALPFFLGMDTEGNPMVEDLAKMPHLLIAGTTGSGKSVCINTILASLLLTRSPHDAKLILIDPKQVELAMFASVPHLMLPVVTDPKHATQVLLWAVEKMEGR 600          
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Match: A0A2D5XQN9_9BACT (FtsK domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XQN9_9BACT)

HSP 1 Score: 303 bits (777), Expect = 3.020e-93
Identity = 162/248 (65.32%), Postives = 181/248 (72.98%), Query Frame = 1
Query:  226 KPAIKASSAPIATLEPVTPPAGPWKLPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAITLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPNKSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIAGTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMVPVVTDARQATNVLLWACEKMEGR 969
            KP    + A     EP TPP GPW LPP  LL    G        LE  A  LE AL SFKV A VVG +VGPA+TLFEL V+ GTRMN+VT L+QEIA  LRAKSVRIIAPIPG+ST+GIEIPN  R  V +  L+ Q AYD    ALPLFLGMDAEG PIV DLA+MPHLLIAGTTGSGKSVCINTI+AS+LLTRSPH+ + +L+DPKMVEL MF  VPH+ +PVV D RQATNVL WA EKME R
Sbjct:  313 KPMALPTPAKQPIYEPPTPPPGPWTLPPTDLLVPPSGAGGTDNEFLERNALALERALKSFKVIAEVVGVQVGPAVTLFELSVSEGTRMNRVTNLSQEIAATLRAKSVRIIAPIPGKSTIGIEIPNTKRRKVRISELISQRAYDKNFMALPLFLGMDAEGQPIVEDLARMPHLLIAGTTGSGKSVCINTIVASLLLTRSPHDARLILVDPKMVELMMFAGVPHLELPVVNDMRQATNVLNWAVEKMEAR 560          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig79225.18597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2B3J7_9BACT1.580e-10669.14DNA translocase FtsK n=1 Tax=Planctomycetes bacter... [more]
A0A2D5AWN6_9BACT4.510e-10569.20DNA translocase FtsK n=1 Tax=Planctomycetes bacter... [more]
A0A7Y4WJ71_9BACT6.850e-10470.80DNA translocase FtsK n=1 Tax=Planctomycetes bacter... [more]
A0A2D6HJV3_9BACT2.110e-10167.83DNA translocase FtsK n=1 Tax=Planctomycetes bacter... [more]
A0A7C8D2U2_9BACT1.570e-9969.70DNA translocase FtsK n=1 Tax=Planctomycetes bacter... [more]
A0A2E5X6C1_9BACT6.300e-9967.46FtsK domain-containing protein n=2 Tax=Planctomyce... [more]
A0A518D447_9BACT2.900e-9864.29DNA translocase FtsK n=1 Tax=Planctomycetes bacter... [more]
A0A518BRT7_9BACT7.260e-9764.57DNA translocase FtsK n=1 Tax=Planctomycetes bacter... [more]
A0A521KHT4_9BACT3.820e-9467.84DNA translocase FtsK (Fragment) n=1 Tax=Planctomyc... [more]
A0A2D5XQN9_9BACT3.020e-9365.32FtsK domain-containing protein n=2 Tax=Planctomyce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig79225contigM-pyrifera_M_contig79225:2..970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score229.2
Seed ortholog evalue2.8e-57
Seed eggNOG ortholog1000569.HMPREF1040_1126
Preferred nameftsK
KEGG koko:K03466
KEGG TC3.A.12
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.FtsK SpoIIIE family protein
EggNOG OGs1TPJR@1239,4H1X4@909932,COG1674@1,COG1674@2
COG Functional cat.D
Best tax levelNegativicutes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons1
Model size969
Cds size969
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816695.184116-CDS-M-pyrifera_M_contig79225:1..9701622816695.184116-CDS-M-pyrifera_M_contig79225:1..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79225 2..970 +
1692278124.4522786-CDS-M-pyrifera_M_contig79225:1..9701692278124.4522786-CDS-M-pyrifera_M_contig79225:1..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig79225 2..970 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig79225.18597.1prot_M-pyrifera_M_contig79225.18597.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig79225 2..970 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig79225.18597.1

>prot_M-pyrifera_M_contig79225.18597.1 ID=prot_M-pyrifera_M_contig79225.18597.1|Name=mRNA_M-pyrifera_M_contig79225.18597.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=323bp
KAATRRPKKAAKVETPELFEEEEEEEEEEYEEEEEEYEDDEEDEYEEEED
EDEEEEEDEEEDEDEVVVRPRPDRKKPAIKASSAPIATLEPVTPPAGPWK
LPPLSLLEEAKGGASASESELEEQASKLENALSSFKVDAHVVGARVGPAI
TLFELEVASGTRMNKVTQLAQEIAGALRAKSVRIIAPIPGRSTVGIEIPN
KSRAVVTLRSLVRQDAYDMKKYALPLFLGMDAEGTPIVADLAKMPHLLIA
GTTGSGKSVCINTILASMLLTRSPHEVQWVLIDPKMVELQMFTSVPHMMV
PVVTDARQATNVLLWACEKMEGR
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mRNA from alignment at M-pyrifera_M_contig79225:2..970+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig79225.18597.1 ID=mRNA_M-pyrifera_M_contig79225.18597.1|Name=mRNA_M-pyrifera_M_contig79225.18597.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=969bp|location=Sequence derived from alignment at M-pyrifera_M_contig79225:2..970+ (Macrocystis pyrifera P11B4 male)
AAGGCGGCCACGCGCCGGCCGAAGAAGGCGGCCAAGGTCGAGACGCCCGA GCTCTTCGAAGAGGAAGAGGAAGAGGAAGAAGAGGAGTACGAGGAGGAGG AAGAGGAGTACGAGGACGACGAAGAGGACGAGTACGAGGAAGAGGAAGAC GAAGACGAGGAGGAGGAGGAGGACGAGGAGGAGGACGAAGACGAAGTCGT CGTGCGCCCGCGTCCCGACCGCAAGAAGCCTGCGATCAAGGCCAGCTCGG CCCCGATCGCGACGCTCGAGCCCGTGACGCCGCCCGCCGGCCCGTGGAAG CTGCCGCCGCTGTCGCTGCTCGAGGAGGCCAAGGGCGGTGCGAGCGCTTC GGAATCCGAGCTCGAGGAGCAGGCCAGCAAGCTCGAGAACGCGCTGTCGT CGTTCAAGGTCGATGCCCACGTGGTCGGCGCGCGGGTCGGCCCCGCGATC ACGCTGTTCGAGCTCGAGGTCGCATCGGGCACGCGCATGAACAAGGTCAC CCAGCTGGCCCAGGAGATCGCCGGCGCGCTGCGCGCCAAGAGCGTGCGGA TCATTGCGCCGATCCCCGGCCGCTCGACGGTCGGCATCGAGATCCCGAAC AAGTCGCGCGCGGTCGTCACGCTGCGCTCGCTCGTGCGCCAGGACGCGTA CGACATGAAGAAGTACGCGCTGCCCCTGTTCCTCGGGATGGACGCCGAGG GCACGCCGATCGTCGCCGACCTCGCCAAGATGCCGCACCTGTTGATCGCG GGCACGACCGGCTCGGGCAAGTCCGTGTGCATCAACACGATCCTCGCCTC GATGCTGCTGACGCGCTCGCCCCACGAGGTCCAGTGGGTGCTGATCGACC CCAAGATGGTCGAGCTGCAGATGTTCACCAGCGTGCCGCACATGATGGTG CCGGTCGTGACCGACGCGCGCCAGGCGACCAACGTGCTGCTCTGGGCGTG CGAAAAGATGGAGGGCCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig79225:2..970+

>mRNA_M-pyrifera_M_contig79225.18597.1 ID=mRNA_M-pyrifera_M_contig79225.18597.1|Name=mRNA_M-pyrifera_M_contig79225.18597.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1938bp|location=Sequence derived from alignment at M-pyrifera_M_contig79225:2..970+ (Macrocystis pyrifera P11B4 male)
AAGGCGGCCACGCGCCGGCCGAAGAAGGCGGCCAAGGTCGAGACGCCCGA
GCTCTTCGAAGAGGAAGAGGAAGAGGAAGAAGAGGAGTACGAGGAGGAGG
AAGAGGAGTACGAGGACGACGAAGAGGACGAGTACGAGGAAGAGGAAGAC
GAAGACGAGGAGGAGGAGGAGGACGAGGAGGAGGACGAAGACGAAGTCGT
CGTGCGCCCGCGTCCCGACCGCAAGAAGCCTGCGATCAAGGCCAGCTCGG
CCCCGATCGCGACGCTCGAGCCCGTGACGCCGCCCGCCGGCCCGTGGAAG
CTGCCGCCGCTGTCGCTGCTCGAGGAGGCCAAGGGCGGTGCGAGCGCTTC
GGAATCCGAGCTCGAGGAGCAGGCCAGCAAGCTCGAGAACGCGCTGTCGT
CGTTCAAGGTCGATGCCCACGTGGTCGGCGCGCGGGTCGGCCCCGCGATC
ACGCTGTTCGAGCTCGAGGTCGCATCGGGCACGCGCATGAACAAGGTCAC
CCAGCTGGCCCAGGAGATCGCCGGCGCGCTGCGCGCCAAGAGCGTGCGGA
TCATTGCGCCGATCCCCGGCCGCTCGACGGTCGGCATCGAGATCCCGAAC
AAGTCGCGCGCGGTCGTCACGCTGCGCTCGCTCGTGCGCCAGGACGCGTA
CGACATGAAGAAGTACGCGCTGCCCCTGTTCCTCGGGATGGACGCCGAGG
GCACGCCGATCGTCGCCGACCTCGCCAAGATGCCGCACCTGTTGATCGCG
GGCACGACCGGCTCGGGCAAGTCCGTGTGCATCAACACGATCCTCGCCTC
GATGCTGCTGACGCGCTCGCCCCACGAGGTCCAGTGGGTGCTGATCGACC
CCAAGATGGTCGAGCTGCAGATGTTCACCAGCGTGCCGCACATGATGGTG
CCGGTCGTGACCGACGCGCGCCAGGCGACCAACGTGCTGCTCTGGGCGTG
CGAAAAGATGGAGGGCCGCAAGGCGGCCACGCGCCGGCCGAAGAAGGCGG
CCAAGGTCGAGACGCCCGAGCTCTTCGAAGAGGAAGAGGAAGAGGAAGAA
GAGGAGTACGAGGAGGAGGAAGAGGAGTACGAGGACGACGAAGAGGACGA
GTACGAGGAAGAGGAAGACGAAGACGAGGAGGAGGAGGAGGACGAGGAGG
AGGACGAAGACGAAGTCGTCGTGCGCCCGCGTCCCGACCGCAAGAAGCCT
GCGATCAAGGCCAGCTCGGCCCCGATCGCGACGCTCGAGCCCGTGACGCC
GCCCGCCGGCCCGTGGAAGCTGCCGCCGCTGTCGCTGCTCGAGGAGGCCA
AGGGCGGTGCGAGCGCTTCGGAATCCGAGCTCGAGGAGCAGGCCAGCAAG
CTCGAGAACGCGCTGTCGTCGTTCAAGGTCGATGCCCACGTGGTCGGCGC
GCGGGTCGGCCCCGCGATCACGCTGTTCGAGCTCGAGGTCGCATCGGGCA
CGCGCATGAACAAGGTCACCCAGCTGGCCCAGGAGATCGCCGGCGCGCTG
CGCGCCAAGAGCGTGCGGATCATTGCGCCGATCCCCGGCCGCTCGACGGT
CGGCATCGAGATCCCGAACAAGTCGCGCGCGGTCGTCACGCTGCGCTCGC
TCGTGCGCCAGGACGCGTACGACATGAAGAAGTACGCGCTGCCCCTGTTC
CTCGGGATGGACGCCGAGGGCACGCCGATCGTCGCCGACCTCGCCAAGAT
GCCGCACCTGTTGATCGCGGGCACGACCGGCTCGGGCAAGTCCGTGTGCA
TCAACACGATCCTCGCCTCGATGCTGCTGACGCGCTCGCCCCACGAGGTC
CAGTGGGTGCTGATCGACCCCAAGATGGTCGAGCTGCAGATGTTCACCAG
CGTGCCGCACATGATGGTGCCGGTCGTGACCGACGCGCGCCAGGCGACCA
ACGTGCTGCTCTGGGCGTGCGAAAAGATGGAGGGCCGC
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