prot_M-pyrifera_M_contig790.18557.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig790.18557.1
Unique Nameprot_M-pyrifera_M_contig790.18557.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length163
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig790.18557.1 vs. uniprot
Match: Q8QNP7_ESV1K (EsV-1-12 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP7_ESV1K)

HSP 1 Score: 77.8 bits (190), Expect = 3.000e-14
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    1 MPLLIPVVNDSKGETVTPTCYKDDGPFTCLGCAKPLVLRQGEKNR 45
            M LLIPV  +  GETVTPTC K+DGPF CLGCAKPLVLRQG+KN+
Sbjct:    1 MSLLIPVAKNKTGETVTPTCNKEDGPFACLGCAKPLVLRQGQKNQ 45
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig790.18557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNP7_ESV1K3.000e-1475.56EsV-1-12 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig790contigM-pyrifera_M_contig790:16408..16896 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig790.18557.1mRNA_M-pyrifera_M_contig790.18557.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig790 16408..17045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig790.18557.1 ID=prot_M-pyrifera_M_contig790.18557.1|Name=mRNA_M-pyrifera_M_contig790.18557.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
MPLLIPVVNDSKGETVTPTCYKDDGPFTCLGCAKPLVLRQGEKNRGISRT
IPRTMTSVLPAGKPTSTWPRNCCWSRTSLGSSSSPTVVACDPFINEGTEG
ARRYMSIATTVCTPRTWACSGTGSWRLPLRSWRRTRLRENRWLPGFLAWG
KTMCGRWKRCAY*
back to top