mRNA_M-pyrifera_M_contig78959.18550.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78959.18550.1
Unique NamemRNA_M-pyrifera_M_contig78959.18550.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: UPI001AC75C95 (Uncharacterized protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=UPI001AC75C95)

HSP 1 Score: 98.2 bits (243), Expect = 3.950e-19
Identity = 95/314 (30.25%), Postives = 138/314 (43.95%), Query Frame = 1
Query:    1 PRGSNQRLDGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAW---DPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQ---YLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVEL 924
            PR  ++R+ G +   ++ + G RV   + +  Y  IEA GA  GGVGG+   +   G    +W    PG L     L  G+ GGG VD G G+ +KA      RL+R    ++   Y  A  G F A      + W   DP  L           A  +   +E     W  G+  + YD +           DG++     V + A R +T  + +  +A     G  GGY+  L G  VQ   F   GP  + AE  +GAAGGG V    G + Q +  V VDL   + L +  G++ AL  G+LDA+ +EL
Sbjct:  217 PRSGSKRMSGGALDSEIVIVGTRVERAIDDHAYWGIEAAGAAGGGVGGYAEYLGTIGTETTVW----PGVLTLGGRLALGMGGGGDVDTGGGMLMKAGAYGTVRLSRELGLTLEGGYTKAPQGSFRAVHAAASLNWILDDPSDLT----------APPRNTRTE-----WVGGI--ERYDAQRR---------DGSRRPLQAVTLKANRFVTPHLYLTGQAHSAAGGGAGGYTAGLVGAGVQAKVF---GPVHVGAEALIGAAGGGGVSTEGGAIAQPSAYVGVDLGRSLALRMSAGKIKALRGGALDATTLEL 497          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: UPI001CE11E04 (hypothetical protein n=1 Tax=Sphingobacterium sp. WQ 366 TaxID=2781959 RepID=UPI001CE11E04)

HSP 1 Score: 84.0 bits (206), Expect = 2.810e-14
Identity = 74/277 (26.71%), Postives = 129/277 (46.57%), Query Frame = 1
Query:   64 LRVGLE--VSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNAL 888
            + VGL+   +++ Y  ++  GAV+GG+ G+ + + G G    L++S+      W+ +++ G +GGG V  G G  ++A +GLR  L  +  A +   +  + DGDF+   L+LGV+   +A +       + L +  L  ++    ++   L  + Y       K G   +D    L+G    + +   +  +   F   +G  G Y+E L GV       +    + + A    GAAGGG +  GSGLV+Q   G+   L     +  GIG+M  L
Sbjct:  243 IGVGLDQFFTKNWYATLKLHGAVSGGIDGYMSYLVGLGYEDKLFKSSTT----WDAQIVAGPSGGGDVATGGGSIVQANIGLRKNLGNSINAKLALGHTWSPDGDFSGTFLELGVS---KAFQFLIPKKTQRLYS--LSNNDYQRHIFDITLLNRVYFSTDRLDKNGY-PYDEAFNLLGFKFSKRIRNGLEAIGATFWAYQGSYGAYAEGLLGVGYNKQLINE--DWTVKAHLLFGAAGGGGINLGSGLVYQYQLGLERSLGGNWGIQSGIGQMRGL 507          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A101JQG9_CHLLI (Uncharacterized protein n=1 Tax=Chlorobium limicola TaxID=1092 RepID=A0A101JQG9_CHLLI)

HSP 1 Score: 77.0 bits (188), Expect = 5.580e-12
Identity = 84/311 (27.01%), Postives = 134/311 (43.09%), Query Frame = 1
Query:   10 SNQRLDGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVELGGAVDV 942
            S+   D  S  DD+ L G+       ++ Y  +E  GA +G   G+  ++ G G R P+ +         +V + G    G  VD GSGL   A  GL+  +  N  A +   Y  +  G F A  + L + +     E+G G+++++    +   S+   D  +F +  + Y  +A  + +   + +  + L G+  +  L  +  +  +     +G  G Y   L G    G     +G   L AE   GAAGGG +  GSGLV Q   G+  DL   V   +  GRM A D G   A+V+ L  A  V
Sbjct:  211 SSAHTDSGSDQDDLTLLGIEWRTYFDDNWYAKLETEGAASGNSTGYMQILTGAGFRLPVTDRLYACA---DVAIGGXXXXG--VDTGSGLMFDAAAGLQLFMTDNLFAELSGGYLSSATGSFDAGSIALKLGY-----EVGGGHEKQSHGVSEQGVSD---DYMRFRIVNQTY-FKADERWRSHHNDEDVENL-GVQVDYFLDRNWYLTGQGLAAYDGGAGAYMTGLIGT---GFRKQLVGGLYLNAEVLAGAAGGGGLAMGSGLVWQGNAGLGYDLGSSVSALVTAGRMEAFD-GDFKANVLGLSLAYHV 502          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A2E1U4W8_9BACT (Uncharacterized protein n=1 Tax=Kiritimatiellaceae bacterium TaxID=2026752 RepID=A0A2E1U4W8_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.190e-11
Identity = 82/300 (27.33%), Postives = 125/300 (41.67%), Query Frame = 1
Query:   34 SYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDF---DGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVEL 924
            S   D  L G+     V+   Y  +E  GA  G   G+  ++ G G      E  L  Q+   +E   G AGGG V  G G+ +    GLR  +  ++   +   Y  A DG+ +   +         A ++GY    E     +  AS G L    F  T   Y  +   K++        D     VG+  +   TE + I  + F    G+ G Y   L G+  Q A       + + AE  VGAAGGG ++ GSGLV Q   G+ + L + +     +GR+ A++ G  DA ++ L
Sbjct:  193 SEQKDFSLVGIEARAHVANGWYAKLETEGAAQGESTGYMQILGGGGR-----EVLLAPQVILFIEAGIGGAGGGSVSTGGGVLIDGAAGLRWCVFDDYYIGISGGYLHAPDGELSGYTV---------ACKIGYTVQYE----DEFEASPGSLKAEPFKKTRIRYSYQHYEKRKENWRSHHPDENVGNVGVQLDTFFTEQLYISGQGFAAANGNAGAYMIGLLGIGFQQAIHQ---AWFVSAECLVGAAGGGGLQMGSGLVAQWNAGIGIKLSETIGFQGYVGRLKAVE-GQFDADIIGL 470          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A7C1ZIK6_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1ZIK6_9GAMM)

HSP 1 Score: 73.6 bits (179), Expect = 7.870e-11
Identity = 73/302 (24.17%), Postives = 130/302 (43.05%), Query Frame = 1
Query:   46 DVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDV----WQFGLTTKAYDMRASAKKQGGGDFDGTQY-LVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVELGGAV 936
            D+ L G+       ++T++ ++A GA+ G   G+ +++ G G     ++  LPGQ + ++ +  G +GGG VD G G      + L+ R        +   + +A DGDF A  L + +    R  +                 + G L++    W+   T + Y  +   +++     D     L G+ A+  +  ++ +  +A G  +G  GGY+  L G  +   P        L AE   GAAGGG +  G GLV Q   G+         L    G   +++ G+ +A+V+ L  A+
Sbjct:  216 DMSLVGVEWDTYFHKNTFLRLQALGAMRGNSDGYASILLGLG-----YDYQLPGQNNLKLAVSLGASGGGNVDTGGGFIADTSLNLQHRFNNGLLLGLKAGFQNAPDGDFEATSLGIYIGHSDRPPK---------------KPNPGGLNIKPRHWRIRATHQTYLPKGDTRRKSQTTPDNRNINLFGLQADIMVNRNIYLTGQAIGAYDGGAGGYAAGLIGTGII-FPLHKKNRLVLNAEVLAGAAGGGGLAIGDGLVTQAMIGIGYRTSRSTSLRASYGMFKSIN-GTFEANVINLSFAL 495          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A7X9GYP4_9BACT (Uncharacterized protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X9GYP4_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 8.140e-11
Identity = 67/278 (24.10%), Postives = 121/278 (43.53%), Query Frame = 1
Query:   46 DVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRM 879
            D+ L G+ +        Y  ++  GA+AGG+ G+ + + G G   PL       +L  + +L+ G +GGG V       L+  VGL  RL   +       +     G      L++ ++ +         + + A    +L  SE  L ++ F L  + Y   +    + G  +D    L+G    + + +   +L       +G  G Y+E L G+R +   + +   +EL A+   GAAGGG ++ GSGLV+  + G+   +     L + +G+M
Sbjct:  235 DISLVGVELDHFFHAQWYAALKLHGAMAGGIDGYMSYLVGVGFEQPLAGD----RLTLDAQLLAGPSGGGGVAXXXXGTLQGTVGLSTRLGEAYGIKAAIGHTFTPGGQLNGTLLEMALSHNFHFYTTAGAHTKTAY---RLKESE-RLRMFGFELLNRTYWSSSERMDKNGRPYDKAFNLMGFVVSKRIHDHFDLLGATNWAYQGSYGAYAEGLLGLRYR---YGWNPSWELRAQALGGAAGGGGIDLGSGLVYHYSAGLVRHISQNWRLAVSVGQM 501          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: UPI0019ACBFBA (Uncharacterized protein n=1 Tax=Caulobacter sp. TaxID=78 RepID=UPI0019ACBFBA)

HSP 1 Score: 73.2 bits (178), Expect = 9.150e-11
Identity = 89/302 (29.47%), Postives = 128/302 (42.38%), Query Frame = 1
Query:   28 GSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAW--DPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYL--VGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVE 921
            G+     + L GLR    V    +  IE  GA +GGV G+  ++A  GLR P+ ++    +L   V    G+AGGG +D G GL +KA  G   RL             DA  G + A    + + W  D  A + G   D    A  ++          +FG   + Y    +A+K G      TQ L  V +   R +T ++ +  +A     G  G YS  L GV   GA         L  E   GAAGGG V+   G + Q      V L D + L +  G++ ++  G LDA VV+
Sbjct:  144 GAPLTQRIGLVGLRAERSVDGPLWAGIETAGAGSGGVAGYAEVLATAGLRWPVVDN----RLSLGVGAAVGLAGGGGIDTGGGLLVKAAAGGTLRLTGTLGVGAELGVVDAPRGHYKAGTAAVSLNWSLDAPAADPGSWSDIRPGAPTRM----------EFGAGVERY---RAARKDGR-----TQPLEAVVLQVNRFVTPNLYVTGQAHSAFAGGAGAYSVGLFGV---GAQLPVTPGLRLGVEALGGAAGGGGVDTQGGALMQGRAYADVALTDALSLRVAGGKIKSV-HGGLDAPVVD 419          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A2M7WQH4_9PROT (Uncharacterized protein n=1 Tax=Zetaproteobacteria bacterium CG_4_9_14_3_um_filter_53_7 TaxID=1974119 RepID=A0A2M7WQH4_9PROT)

HSP 1 Score: 72.4 bits (176), Expect = 1.910e-10
Identity = 80/306 (26.14%), Postives = 132/306 (43.14%), Query Frame = 1
Query:   28 GSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDW-EVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASE-GMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVVELGGAVD 939
            G      ++L G+     + ++ ++ IE+ GA+ G   G+  ++ G G R  L + +      W ++    GVAGGG V  G GL + A+  ++ RL+ +  A V   Y    +  F A  L         A +LGY +    + ++ +  S+    D   F +         +A        +    L+G+  +    E++ +  +     +G  G Y   L G  +    F+   P  + AE  VGAAGGG +  GSGLV Q   G+   LFD   L    G M+A+ +G+  A V+ L  A D
Sbjct:  212 GQPQHKSIQLMGIEWNNYLDDNVFLKIESEGAMGGKSNGYMQILFGMGYRFELIDGST-----WVKLSSSAGVAGGGDVATGGGLIVDAVASVQQRLSDHLFAEVSAGYVRVPETTFKAISL---------AGKLGYHFYTPDVRDESVALSDLAGFDTSYFRIRATHQSYYKAAANWRSHHANLNVDLLGLQIDYFPHENIYLTGQGIAAYKGQAGAYMTGLVGAGLHMPLFNT--PLFVDAEALVGAAGGGGLAVGSGLVWQANAGLGYQLFDDFSLLAQYGYMSAI-KGNFKAKVMTLSFAYD 500          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A1F3GXT2_9BACT (Uncharacterized protein n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3GXT2_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 1.950e-10
Identity = 68/278 (24.46%), Postives = 119/278 (42.81%), Query Frame = 1
Query:   46 DVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRM 879
            D+ L G+ +        Y  ++  GAVAGG+ G+ + + G G    L       +L  + +L+ G +GGG +       ++  VGLRA L   +             G+F    L+LG++ + +    G   DR+    +        L  + F L  + Y     +  + G  +D +  L+G+   +       IL   +   +G  G Y+E L G+   G  +     ++  A+   GAAGGG ++ G+GLV Q + G+A  +       +G G+M
Sbjct:  231 DIYLVGIELDHFFHHKWYAALKLHGAVAGGIDGYMSYLVGLGFEQALGTD----RLTLDTQLLAGPSGGGGIASXXXXXIQGSVGLRALLGNAYGIKAAIGQTITPGGEFNGTLLELGLSKNFQFASTGG--DRQRTVYRLKDTDR--LHEFGFELQNRTYYPSTKSTDKNGRPYDRSFNLMGLVVSKKFHHHFDILGATYWAYQGSYGAYAEGLLGL---GYRYARTPSWKFRAQVLGGAAGGGGIDTGNGLVFQYSAGLAHQINQNWGFSIGAGQM 497          
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Match: A0A7Y0C559_9BURK (Uncharacterized protein n=1 Tax=Polaromonas sp. TaxID=1869339 RepID=A0A7Y0C559_9BURK)

HSP 1 Score: 71.2 bits (173), Expect = 4.700e-10
Identity = 76/299 (25.42%), Postives = 126/299 (42.14%), Query Frame = 1
Query:   25 DGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFRALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVGLRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDREALANQQLP-ASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIGAERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYAEYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGSLDASVV 918
            DG      ++L G+     + +  ++ +E+ GA+ G   G+  ++AG G R PL  S        ++    G AGGG+VD G GL L A + L+  L       +      A    F A+ +         AL+L Y +   A+ +  +P  + G  D     +         ++     GD D +   +G+  +  ++  + +  +  G   G  G Y   L G+   G  +     + +  E   GAAGGG +  G GLV Q+  GV   L   + +   +GR+ AL RG   A+VV
Sbjct:  228 DGQPQHRSMQLLGVEWLSYIDDRWFLKLESEGAMGGQSNGYMQILAGGGYRLPLTRSTA-----LKLHAAAGPAGGGRVDTGGGLLLDAGIALQQNLTPRTAVELSVGEVRAPSRSFKASSV---------ALKLNYRFGLPAVTSAAVPWETLGGFDAEPLRVRVVNQTYFKASPNWRNGDVDRSVSNLGVQLDYFVSPHLFLTGQGLGAYAGKAGAYMTGLVGL---GGQWPVSERWFVEGEALAGAAGGGGLAVGGGLVGQVNAGVGYRLSKSLSVMTTVGRIEAL-RGDFKANVV 508          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78959.18550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001AC75C953.950e-1930.25Uncharacterized protein n=1 Tax=Burkholderiaceae b... [more]
UPI001CE11E042.810e-1426.71hypothetical protein n=1 Tax=Sphingobacterium sp. ... [more]
A0A101JQG9_CHLLI5.580e-1227.01Uncharacterized protein n=1 Tax=Chlorobium limicol... [more]
A0A2E1U4W8_9BACT4.190e-1127.33Uncharacterized protein n=1 Tax=Kiritimatiellaceae... [more]
A0A7C1ZIK6_9GAMM7.870e-1124.17Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A7X9GYP4_9BACT8.140e-1124.10Uncharacterized protein n=1 Tax=Bacteroidales bact... [more]
UPI0019ACBFBA9.150e-1129.47Uncharacterized protein n=1 Tax=Caulobacter sp. Ta... [more]
A0A2M7WQH4_9PROT1.910e-1026.14Uncharacterized protein n=1 Tax=Zetaproteobacteria... [more]
A0A1F3GXT2_9BACT1.950e-1024.46Uncharacterized protein n=3 Tax=Bacteroidetes TaxI... [more]
A0A7Y0C559_9BURK4.700e-1025.42Uncharacterized protein n=1 Tax=Polaromonas sp. Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78959contigM-pyrifera_M_contig78959:11..976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score95.9
Seed ortholog evalue3.7e-17
Seed eggNOG ortholog74545.EU96_2051
Hectar predicted targeting categoryother localisation
EggNOG OGs28JVP@1,2Z9KK@2
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size966
Cds size966
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816692.834353-CDS-M-pyrifera_M_contig78959:10..9761622816692.834353-CDS-M-pyrifera_M_contig78959:10..976Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78959 11..976 -
1692278123.2235334-CDS-M-pyrifera_M_contig78959:10..9761692278123.2235334-CDS-M-pyrifera_M_contig78959:10..976Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78959 11..976 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78959.18550.1prot_M-pyrifera_M_contig78959.18550.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78959 11..976 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78959.18550.1

>prot_M-pyrifera_M_contig78959.18550.1 ID=prot_M-pyrifera_M_contig78959.18550.1|Name=mRNA_M-pyrifera_M_contig78959.18550.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=322bp
PRGSNQRLDGSSYADDVRLGGLRVGLEVSESTYVPIEAWGAVAGGVGGFR
ALMAGYGLRGPLWESALPGQLDWEVELMGGVAGGGQVDVGSGLALKALVG
LRARLARNWTASVGYAYFDARDGDFTANGLQLGVAWDPRALELGYGYDRE
ALANQQLPASEGMLDVWQFGLTTKAYDMRASAKKQGGGDFDGTQYLVGIG
AERHLTESVSILARAFGPVEGDIGGYSEVLGGVRVQGAPFDFMGPFELYA
EYDVGAAGGGAVEAGSGLVHQIAGGVAVDLFDGVELGLGIGRMNALDRGS
LDASVVELGGAVDVARVLSRR*
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mRNA from alignment at M-pyrifera_M_contig78959:11..976-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78959.18550.1 ID=mRNA_M-pyrifera_M_contig78959.18550.1|Name=mRNA_M-pyrifera_M_contig78959.18550.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig78959:11..976- (Macrocystis pyrifera P11B4 male)
CCGCGCGGCAGCAACCAGCGGTTGGACGGCAGCAGCTATGCGGACGACGT GCGGCTCGGCGGGCTGCGGGTCGGTCTGGAGGTCAGCGAGTCGACGTACG TGCCGATCGAGGCGTGGGGTGCGGTCGCCGGCGGCGTCGGCGGCTTCCGC GCGTTGATGGCCGGGTATGGCCTGCGTGGGCCGCTCTGGGAGAGCGCGCT GCCGGGGCAGCTCGACTGGGAGGTCGAGCTGATGGGCGGCGTGGCCGGTG GCGGGCAGGTCGACGTGGGCTCGGGCTTGGCGCTGAAGGCGCTGGTCGGG CTGCGCGCGCGCCTGGCGCGCAACTGGACGGCATCGGTCGGGTACGCGTA CTTCGATGCGCGCGACGGCGACTTCACCGCGAACGGTCTGCAGCTGGGCG TTGCGTGGGATCCGCGCGCGCTCGAGCTCGGGTACGGCTACGACCGCGAG GCGCTGGCGAATCAACAGCTGCCGGCGTCGGAGGGCATGCTGGACGTGTG GCAGTTCGGGCTGACGACCAAGGCGTACGACATGCGCGCGAGCGCGAAGA AGCAGGGCGGCGGCGACTTCGACGGCACGCAGTACCTGGTCGGCATCGGC GCCGAGCGGCATCTGACCGAGAGCGTGTCGATCCTCGCGCGGGCCTTCGG GCCGGTCGAGGGGGACATCGGCGGGTACAGCGAAGTGCTGGGAGGCGTGC GGGTGCAGGGTGCGCCGTTCGACTTCATGGGGCCGTTCGAGTTGTACGCC GAGTACGACGTGGGCGCGGCCGGGGGCGGCGCCGTCGAGGCGGGCTCGGG GTTGGTGCACCAGATCGCGGGCGGCGTGGCGGTGGACCTGTTCGACGGCG TCGAGCTGGGGCTGGGCATCGGGCGCATGAACGCGTTGGACCGCGGCAGC CTGGACGCGAGCGTGGTCGAGCTGGGCGGGGCGGTCGACGTCGCGCGCGT GCTCTCGCGGAGGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78959:11..976-

>mRNA_M-pyrifera_M_contig78959.18550.1 ID=mRNA_M-pyrifera_M_contig78959.18550.1|Name=mRNA_M-pyrifera_M_contig78959.18550.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1932bp|location=Sequence derived from alignment at M-pyrifera_M_contig78959:11..976- (Macrocystis pyrifera P11B4 male)
CCGCGCGGCAGCAACCAGCGGTTGGACGGCAGCAGCTATGCGGACGACGT
GCGGCTCGGCGGGCTGCGGGTCGGTCTGGAGGTCAGCGAGTCGACGTACG
TGCCGATCGAGGCGTGGGGTGCGGTCGCCGGCGGCGTCGGCGGCTTCCGC
GCGTTGATGGCCGGGTATGGCCTGCGTGGGCCGCTCTGGGAGAGCGCGCT
GCCGGGGCAGCTCGACTGGGAGGTCGAGCTGATGGGCGGCGTGGCCGGTG
GCGGGCAGGTCGACGTGGGCTCGGGCTTGGCGCTGAAGGCGCTGGTCGGG
CTGCGCGCGCGCCTGGCGCGCAACTGGACGGCATCGGTCGGGTACGCGTA
CTTCGATGCGCGCGACGGCGACTTCACCGCGAACGGTCTGCAGCTGGGCG
TTGCGTGGGATCCGCGCGCGCTCGAGCTCGGGTACGGCTACGACCGCGAG
GCGCTGGCGAATCAACAGCTGCCGGCGTCGGAGGGCATGCTGGACGTGTG
GCAGTTCGGGCTGACGACCAAGGCGTACGACATGCGCGCGAGCGCGAAGA
AGCAGGGCGGCGGCGACTTCGACGGCACGCAGTACCTGGTCGGCATCGGC
GCCGAGCGGCATCTGACCGAGAGCGTGTCGATCCTCGCGCGGGCCTTCGG
GCCGGTCGAGGGGGACATCGGCGGGTACAGCGAAGTGCTGGGAGGCGTGC
GGGTGCAGGGTGCGCCGTTCGACTTCATGGGGCCGTTCGAGTTGTACGCC
GAGTACGACGTGGGCGCGGCCGGGGGCGGCGCCGTCGAGGCGGGCTCGGG
GTTGGTGCACCAGATCGCGGGCGGCGTGGCGGTGGACCTGTTCGACGGCG
TCGAGCTGGGGCTGGGCATCGGGCGCATGAACGCGTTGGACCGCGGCAGC
CTGGACGCGAGCGTGGTCGAGCTGGGCGGGGCGGTCGACGTCGCGCGCGT
GCTCTCGCGGAGGTAGCCGCGCGGCAGCAACCAGCGGTTGGACGGCAGCA
GCTATGCGGACGACGTGCGGCTCGGCGGGCTGCGGGTCGGTCTGGAGGTC
AGCGAGTCGACGTACGTGCCGATCGAGGCGTGGGGTGCGGTCGCCGGCGG
CGTCGGCGGCTTCCGCGCGTTGATGGCCGGGTATGGCCTGCGTGGGCCGC
TCTGGGAGAGCGCGCTGCCGGGGCAGCTCGACTGGGAGGTCGAGCTGATG
GGCGGCGTGGCCGGTGGCGGGCAGGTCGACGTGGGCTCGGGCTTGGCGCT
GAAGGCGCTGGTCGGGCTGCGCGCGCGCCTGGCGCGCAACTGGACGGCAT
CGGTCGGGTACGCGTACTTCGATGCGCGCGACGGCGACTTCACCGCGAAC
GGTCTGCAGCTGGGCGTTGCGTGGGATCCGCGCGCGCTCGAGCTCGGGTA
CGGCTACGACCGCGAGGCGCTGGCGAATCAACAGCTGCCGGCGTCGGAGG
GCATGCTGGACGTGTGGCAGTTCGGGCTGACGACCAAGGCGTACGACATG
CGCGCGAGCGCGAAGAAGCAGGGCGGCGGCGACTTCGACGGCACGCAGTA
CCTGGTCGGCATCGGCGCCGAGCGGCATCTGACCGAGAGCGTGTCGATCC
TCGCGCGGGCCTTCGGGCCGGTCGAGGGGGACATCGGCGGGTACAGCGAA
GTGCTGGGAGGCGTGCGGGTGCAGGGTGCGCCGTTCGACTTCATGGGGCC
GTTCGAGTTGTACGCCGAGTACGACGTGGGCGCGGCCGGGGGCGGCGCCG
TCGAGGCGGGCTCGGGGTTGGTGCACCAGATCGCGGGCGGCGTGGCGGTG
GACCTGTTCGACGGCGTCGAGCTGGGGCTGGGCATCGGGCGCATGAACGC
GTTGGACCGCGGCAGCCTGGACGCGAGCGTGGTCGAGCTGGGCGGGGCGG
TCGACGTCGCGCGCGTGCTCTCGCGGAGGTAG
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