mRNA_M-pyrifera_M_contig784.18427.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: D8LBE9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE9_ECTSI) HSP 1 Score: 211 bits (537), Expect = 1.200e-61 Identity = 119/161 (73.91%), Postives = 138/161 (85.71%), Query Frame = 3 Query: 6 KSFSFLAVVLLSLLFDVCSGFVVPSTSALNVRQSPQSGGMQMFXXXXXXXXXXXXSKGIVVKVQQKTGFKETELVLQGKTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDK--KPATYRLSCCTMVSGPVTIKTKP 482 KSF F+A+++L+ + + +GFVV +S+LNVR+ SG +F XXXXXXXXXXX IVVKVQQKTGFKETEL L GKTNLRKAL++NKID+YPLQGKIYNCGGGGSCGTCAVNV AGA NCSPKGPGEKKLLDK +PA+YRLSCCTMVSGPVT++TKP Sbjct: 2 KSFLFVALIVLAAVLQISNGFVVAPSSSLNVRRQSHSGMQMLFGXXXXXXXXXXX---IVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLDKNKRPASYRLSCCTMVSGPVTVQTKP 159
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: A0A836CNT2_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNT2_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.480e-38 Identity = 72/104 (69.23%), Postives = 83/104 (79.81%), Query Frame = 3 Query: 171 SKGIVVKVQQKTGFKETELVLQGKTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKKPATYRLSCCTMVSGPVTIKTKP 482 SKGI V VQQK FK+T + ++ NLRKAL+ I++YPLQGKIYNCGGGGSCGTC VNVVAG +NCSPKGP EKKLL KP TYRLSCCT V+G +T+ TKP Sbjct: 53 SKGIEVTVQQKY-FKDTVVAMEQPGNLRKALMGAGIEIYPLQGKIYNCGGGGSCGTCTVNVVAGGNNCSPKGPAEKKLLGNKPETYRLSCCTKVNGNITVATKP 155
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: A0A7S2UXM9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM9_9STRA) HSP 1 Score: 133 bits (335), Expect = 7.360e-33 Identity = 75/155 (48.39%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 18 FLAVVLLSLLFDVCSGFVVPSTSALNVRQSPQSGGMQMFXXXXXXXXXXXXSKGIVVKVQQKTGFKETELVLQGKTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKKPATYRLSCCTMVSGPVTIKTKP 482 F V+ L S F+ S ALN Q+ S +QM I VK + GF + +L +G NLRK L+ KID+YPLQGK+ NCGGGG CGTCAV V+ GA+N SPK P EKK+L KKP YRLSCCT VSG T++TKP Sbjct: 3 FTVVIFLVCAISGASAFLGQSL-ALNRVQASSSTSLQMLFGSKKKAAPVKGKYSITVKQR---GFTDFDLETEGTANLRKTLMAQKIDIYPLQGKLTNCGGGGVCGTCAVEVMDGANNLSPKAPNEKKVLSKKPENYRLSCCTRVSGACTVRTKP 153
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: W7TM71_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM71_9STRA) HSP 1 Score: 117 bits (292), Expect = 6.870e-27 Identity = 61/106 (57.55%), Postives = 72/106 (67.92%), Query Frame = 3 Query: 174 KGIVVKVQQKTGFKETELVLQG--KTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLD-KKPATYRLSCCTMVSGPVTIKTKP 482 K V VQQK +K EL ++ NLRK L+ NKID+YPLQGKIYNCGGGG CGTCA+ ++ GA N +PK P E K L KK RL+CCT SG VT+KTKP Sbjct: 54 KTFTVTVQQKF-YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: A0A2T1LXP7_9CHRO (Iron ABC transporter substrate-binding protein n=2 Tax=Chroococcales TaxID=1118 RepID=A0A2T1LXP7_9CHRO) HSP 1 Score: 108 bits (270), Expect = 1.180e-24 Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 3 Query: 204 TGFKETELVLQGK-TNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKKPATYRLSCCTMVSGPVTIKTKP 482 T KE +LV+ NLR+ L N ID+Y L+GK+ NCGG G CGTC V +V G N SPK P EK++L KKP TYRL+C +V+GP+T+KTKP Sbjct: 5 TFIKENKLVVAADGANLREKALQNGIDIYTLKGKLMNCGGYGQCGTCVVEIVEGLENLSPKTPFEKRVLRKKPQTYRLACQALVNGPITVKTKP 98
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: UPI00055BF685 ((2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055BF685) HSP 1 Score: 102 bits (253), Expect = 2.850e-22 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = 3 Query: 219 TELVLQGKTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKKPATYRLSCCTMVSGPVTIKTKP 482 TE+V +NLR+ L N +D+Y L+GK+ NCGG G C TC V++V G N SP+ E+K L KKP +YRLSC T+V GP+T++TKP Sbjct: 17 TEVVAANGSNLREKALQNNVDIYKLKGKLTNCGGVGQCSTCIVDIVEGMENLSPRTDFEQKRLGKKPDSYRLSCQTVVKGPITVRTKP 104
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: A0YK96_LYNSP (Probable ferredoxin n=3 Tax=Oscillatoriales TaxID=1150 RepID=A0YK96_LYNSP) HSP 1 Score: 100 bits (250), Expect = 6.090e-22 Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 3 Query: 222 ELVLQGKTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKKPATYRLSCCTMVSGPVTIKTKP 482 E++ NLR L +ID+Y GK+ NCGG G CGTC V VV G N SP+ EK++L KKP +YRL+C TMV+GPVTIKTKP Sbjct: 12 EIIAADGANLRIKALEKQIDLYTFMGKMMNCGGYGQCGTCIVEVVEGMENLSPRTDTEKRILKKKPDSYRLACQTMVNGPVTIKTKP 98
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: M1VFK1_CYAM1 (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VFK1_CYAM1) HSP 1 Score: 103 bits (256), Expect = 1.250e-21 Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 3 Query: 243 TNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKK--PATYRLSCCTMVSGPVTIKTKP 482 +NLRK LL NKIDVY L+GK+ NCGGGG CGTC V++ G N +P+G E ++ + K P ++RLSCCT + GP+T++TKP Sbjct: 109 SNLRKVLLENKIDVYTLRGKLTNCGGGGQCGTCIVDITEGQYNTNPRGWREARIFENKQAPDSWRLSCCTKIEGPITVRTKP 190
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: A0A0V7ZXI1_9CYAN (Iron ABC transporter substrate-binding protein n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZXI1_9CYAN) HSP 1 Score: 98.6 bits (244), Expect = 3.960e-21 Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 216 ETELVLQGKTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKKPATYRLSCCTMVSGPVTIKTKP 482 + E+V NLR + N +D+Y + GK+ NCGG G CGTCAV +V+G N SP+ E KLL KKP YRL+C T+V+GPV + TKP Sbjct: 10 DKEVVAATGANLRLKAMENSVDIYKMWGKMMNCGGYGQCGTCAVEIVSGMENLSPRTDAENKLLKKKPDNYRLACQTLVNGPVEVITKP 98
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Match: A0A835YVE2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.160e-21 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 171 SKGIVVKVQQKTGFKETELV-LQGKTNLRKALLNNKIDVYPLQGKIYNCGGGGSCGTCAVNVVAGASNCSPKGPGEKKLLDKKPATYRLSCCTMVSGPVTIKTKP 482 SKG+ V V Q G K + + NLRK LL+NK+D+Y K+ CGGGG+CGTC V V G NCS KG GE+K+L A RL+CCT V+GPV++ KP Sbjct: 16 SKGVSVTVSQ--GSKVLKQIDSDAPVNLRKLLLDNKVDLYKPLDKLKQCGGGGTCGTCRVRVTEGMENCSKKGLGEEKMLKAVGADIRLACCTRVTGPVSVTVKP 118 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig784.18427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig784.18427.1 >prot_M-pyrifera_M_contig784.18427.1 ID=prot_M-pyrifera_M_contig784.18427.1|Name=mRNA_M-pyrifera_M_contig784.18427.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp MQMFFGGGGAKKGAAASKGIVVKVQQKTGFKETELVLQGKTNLRKALLNNback to top mRNA from alignment at M-pyrifera_M_contig784:1002..3136+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig784.18427.1 ID=mRNA_M-pyrifera_M_contig784.18427.1|Name=mRNA_M-pyrifera_M_contig784.18427.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2135bp|location=Sequence derived from alignment at M-pyrifera_M_contig784:1002..3136+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig784:1002..3136+ >mRNA_M-pyrifera_M_contig784.18427.1 ID=mRNA_M-pyrifera_M_contig784.18427.1|Name=mRNA_M-pyrifera_M_contig784.18427.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig784:1002..3136+ (Macrocystis pyrifera P11B4 male)back to top |