mRNA_M-pyrifera_M_contig78283.18401.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig78283.18401.1
Unique NamemRNA_M-pyrifera_M_contig78283.18401.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A7S4I443_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I443_9EUKA)

HSP 1 Score: 181 bits (460), Expect = 9.100e-54
Identity = 93/203 (45.81%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    4 IEELEGRLLMLSQPKGNKPRKLIRQMTHALVNKEKVKKLTVSCEDPVVTQRLAATGGSNAGVYSCLVDGFTCAMKELDLTHMDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEKPFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRLT 612
            +EELE R+  LS+ K       + ++      +     +TVS +  ++TQ+++  GGS+A +YSCLVDG++  MKEL  + M    I +F  EIRLLELMP H NIVRYLFHE  ++ +RLFMTQY   LG+ I+   +  +   ++   ++ LD+I+GIE+LH Q I+HRDLKS+N+F+L+ ERK I+ CAIGDFDTAK+++
Sbjct:   37 VEELEARIKELSKGK-------LAKLNTVFSPRRSKTAITVSTKSIIITQKISEGGGSSAELYSCLVDGWSVVMKELGTSTMSQASIEAFSREIRLLELMPPHPNIVRYLFHEVKDNYLRLFMTQYDCSLGSYIRAMKESGERIPLKTIYRVLLDVIRGIEYLHSQNIMHRDLKSENIFILYGERKEIQLCAIGDFDTAKQVS 232          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A7S4I3N0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I3N0_9EUKA)

HSP 1 Score: 181 bits (460), Expect = 7.990e-53
Identity = 93/203 (45.81%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    4 IEELEGRLLMLSQPKGNKPRKLIRQMTHALVNKEKVKKLTVSCEDPVVTQRLAATGGSNAGVYSCLVDGFTCAMKELDLTHMDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEKPFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRLT 612
            +EELE R+  LS+ K       + ++      +     +TVS +  ++TQ+++  GGS+A +YSCLVDG++  MKEL  + M    I +F  EIRLLELMP H NIVRYLFHE  ++ +RLFMTQY   LG+ I+   +  +   ++   ++ LD+I+GIE+LH Q I+HRDLKS+N+F+L+ ERK I+ CAIGDFDTAK+++
Sbjct:   37 VEELEARIKELSKGK-------LAKLNTVFSPRRSKTAITVSTKSIIITQKISEGGGSSAELYSCLVDGWSVVMKELGTSTMSQASIEAFSREIRLLELMPPHPNIVRYLFHEVKDNYLRLFMTQYDCSLGSYIRAMKESGERIPLKTIYRVLLDVIRGIEYLHSQNIMHRDLKSENIFILYGERKEIQLCAIGDFDTAKQVS 232          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A7S4PHW6_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4PHW6_9EUKA)

HSP 1 Score: 184 bits (466), Expect = 4.950e-52
Identity = 98/183 (53.55%), Postives = 129/183 (70.49%), Query Frame = 1
Query:   82 THALVNKEKVKKLTVSCEDPVVTQRLAATGGSNAGVYSCLVDGFTCAMKELDLTH--MDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRC-----KEEKPFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRL 609
            T A   K+K K++T++ ++ +VT++LAATGGSNAGVY+C VDG+ CAMKEL ++   M+   I +F  EI LLE +P ++NIV+YL HE   DKIRLF+T+YSS L  EIQKR       E++P+         LD++ G+EFLH+Q IIHRDLKSDN+FV  +ERK I   AIGDFDTAK L
Sbjct:  224 TPASPAKKKAKEMTINFDNLLVTEKLAATGGSNAGVYACYVDGWQCAMKELMVSSLKMEASQINNFESEIGLLESLPHNNNIVKYLHHERQKDKIRLFITKYSSTLRNEIQKRKLDVEDDEDEPYSPAEIVTYLLDLVSGLEFLHNQNIIHRDLKSDNIFVTLNERKEISNLAIGDFDTAKSL 406          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A3G5AEB3_9VIRU (Protein kinase domain-containing protein (Fragment) n=1 Tax=Satyrvirus sp. TaxID=2487771 RepID=A0A3G5AEB3_9VIRU)

HSP 1 Score: 140 bits (354), Expect = 4.140e-37
Identity = 77/169 (45.56%), Postives = 107/169 (63.31%), Query Frame = 1
Query:  103 EKVKKLTVSCEDPVVTQRLAATGGSNAGVYSCLVDGFTCAMKELDLTHMD--DFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEKPFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAK 603
            E +KK+ ++ +   + Q+LA TGGS A +YSC +DG+ CAMKE+DL  MD   F I +F  EI+L+E +P H N+VRYLF+   N  IRLFMT Y S +   +++R K  K F     ++   DI+ G+E LH+  IIHRDLK  N+FV  ++   I    IGDFDTA+
Sbjct:   52 EPIKKV-INLKKIEIHQQLAVTGGSFATIYSCTIDGWKCAMKEMDLVIMDLDTFHIENFKKEIKLMEKLPVHKNLVRYLFYTIDNTHIRLFMTLYDSSMSYILEQRSKLSKKFKPNDISRFLKDILSGLEILHENRIIHRDLKLCNIFVSKNQFGDIENLCIGDFDTAR 219          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A7S4NK31_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NK31_9EUKA)

HSP 1 Score: 144 bits (364), Expect = 1.750e-36
Identity = 72/172 (41.86%), Postives = 102/172 (59.30%), Query Frame = 1
Query:  124 VSCEDPVVTQRLAATGGSNAGVYSCLVD-GFTCAMKELDLTHMDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEK---------PFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRL 609
            +S ++  + +RLAA GGS A VY C +D  + C +KEL+L+ +    +A F  EI LLE +P+H N+VRYLFH+ T    RLFMT+Y S L   + K     +         P   Q   +I LD+  G+  LH   I+HRDLK+DN+FV  +ER+ +  C+IGD D AK+L
Sbjct:  480 ISMKNVELNERLAADGGSGASVYVCTIDDSWQCVVKELNLSGIGSDVVAKFESEILLLESLPKHRNLVRYLFHDRTKTTFRLFMTRYHSTLANHLSKLSPNHQEEGEGNFPPPLSFQTCVQIGLDVATGVNILHQTNIVHRDLKTDNIFVSLNERRELACCSIGDMDIAKKL 651          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A2P6NVA3_9EUKA (Protein kinase domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NVA3_9EUKA)

HSP 1 Score: 141 bits (356), Expect = 1.310e-35
Identity = 92/232 (39.66%), Postives = 129/232 (55.60%), Query Frame = 1
Query:    4 IEELEGRLLMLSQPK-GNKPRKLIRQMTHALVNKEKVKKLTVSCEDPVVTQRLA-ATGGSNAGVYSCLVDGFTCAMKELDLT-----HMDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQ------KRCKEE---KPFGVQLAAK-------------IALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRLT 612
            ++E+   +L+ + P  GN  + +      +L  +  VKK+ V   + +V  +L    GGS AG+Y+C VDG++C MKEL +T     H+ +     FL EI+LLE +P H NI RYLFH E +DKI+LF T+YS  L   I+      KR KEE    P   + +AK             IA+ I+ G+EFLH+  +IHRDLKSDN+ V  +    I    I DFDTAK+LT
Sbjct:  299 LKEMNQSILVQNAPTVGNLFKTVFTTKQRSLTMEPGVKKILVDVANVIVADKLVEGVGGSFAGIYNCYVDGWSCCMKELVITEGMLYHLPNIK-EKFLTEIKLLENLPYHPNITRYLFHREMDDKIQLFTTKYSGSLLDMIELRRGNLKRLKEETKLSPNSQRRSAKRTKTYFSAREICDIAMQIMDGLEFLHNHDVIHRDLKSDNILVTLNNNSEISTIYIADFDTAKKLT 529          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A7S4KZC5_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KZC5_9EUKA)

HSP 1 Score: 138 bits (348), Expect = 1.080e-34
Identity = 69/165 (41.82%), Postives = 103/165 (62.42%), Query Frame = 1
Query:  115 KLTVSCEDPVVTQRLAATGGSNAGVYSCLVDGFTCAMKELDLTHMDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEKPFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRL 609
            K  +S ++  + +R+++  GS   V  C VDG+ CA K L L  +    +A F  E+ LLE +P H N+VRYLFH+     +RLFM +Y++ L   +Q+R + E PF ++    I LD++ G++ LH   IIHRDLKS N+FV  D  +A++ C+IGD D+AKRL
Sbjct:  299 KFVISLKNIDMNERISSDTGSGCVVSVCYVDGWQCAAKVLSLEGLPAAQVAKFESEVSLLESLPPHKNLVRYLFHQTNRSTMRLFMRRYATTLRGYLQERREMEHPFTLKEMVHIGLDLVVGMDVLHRHKIIHRDLKSANIFVTLDGMRALQCCSIGDMDSAKRL 463          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A2P6NVW4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NVW4_9EUKA)

HSP 1 Score: 136 bits (342), Expect = 1.900e-33
Identity = 71/160 (44.38%), Postives = 100/160 (62.50%), Query Frame = 1
Query:  145 VTQRLAATGGSNAGVYSCLVDGFTCAMKELDLTHMDDFCIASFLGEIRLLELMPRHDNIVRYLFHE----ETNDKIRLFMTQYSSVLGTEIQKRCKEEKPFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRLT 612
            + +R++  GGS   +++  VDG+ C +KE  +T +    + S   EI LLE +P H N+VRYLFH     E  D +++FMT+YS+ LG  I  R  EE+ F V   AK+ LD+ KG+E LH + IIHRDLKSDNVF++ + +  I    I DFDTAK +T
Sbjct:  600 IAERISHAGGSGGSIHTAYVDGWQCVVKEFSMTFLTPEAVESIDNEICLLESLPIHMNLVRYLFHRKVTGEHGDMMQIFMTKYSNSLGKIIANRKMEERYFTVLEVAKMWLDLAKGLEALHLRHIIHRDLKSDNVFIMLNAQGNIGNLVIADFDTAKSVT 759          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A7S4KEG3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KEG3_9EUKA)

HSP 1 Score: 128 bits (322), Expect = 7.330e-32
Identity = 69/169 (40.83%), Postives = 101/169 (59.76%), Query Frame = 1
Query:  121 TVSCEDPVVTQRLAATGGSNAGVYSCLVDGFTCAMKELDLT---HMDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEK-----PFGVQLAAKIALDIIKGIEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAK 603
            T+     ++T+RLA TGGS A +YSC VDG +C +KE  +    +++   +  F  EI L+E + +H NIVRYL H E    +RLF+T+Y + L  EI  R  + K     P+   +   +  D++ G+E+LH  GI+HRDLKSDN+F+ F ++       IGDFDTAK
Sbjct:  106 TIDFTHAIITRRLAPTGGSGADIYSCDVDGVSCVLKEYLVEKKGNLEKQALEKFSHEIDLIEGL-KHPNIVRYLHHVERRGILRLFITRYETSLRKEITNRALDIKEDLDDPYPASVIVSLFSDLVDGLEYLHSHGIMHRDLKSDNIFLNFGKQGGSYTAVIGDFDTAK 273          
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Match: A0A2P6N7K6_9EUKA (Protein kinase domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N7K6_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 1.140e-27
Identity = 68/151 (45.03%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  166 TGGSNAGVYSCLVDGFTCAMKELDLTHMDDFCIASFLGEIRLLELMPRHDNIVRYLFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEKPFGVQLAAKIALDIIKGIEFLH--DQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRLT 612
            TGGS A VY C + GFTCA+K L+L        ++FL E+ L+E +  HDNIVRYL H+  ++K+RLFM  Y   L + IQKR     PF  +   K  L + KG+ +LH  ++ I+HRDLKS NV V  DE+  I+   I DFDT++ +T
Sbjct:  916 TGGSGASVYRCSLQGFTCAVKILNLQDALPETQSAFLDEVLLIETLY-HDNIVRYLGHDLKDNKVRLFMEYYPFSLHSVIQKR--RGVPFPYKQITKCCLSVAKGLAYLHFGEKPIVHRDLKSGNVLVALDEQDCIKLVKITDFDTSRVIT 1063          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78283.18401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I443_9EUKA9.100e-5445.81Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S4I3N0_9EUKA7.990e-5345.81Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S4PHW6_9EUKA4.950e-5253.55Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A3G5AEB3_9VIRU4.140e-3745.56Protein kinase domain-containing protein (Fragment... [more]
A0A7S4NK31_9EUKA1.750e-3641.86Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A2P6NVA3_9EUKA1.310e-3539.66Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A7S4KZC5_9EUKA1.080e-3441.82Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A2P6NVW4_9EUKA1.900e-3344.38Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S4KEG3_9EUKA7.330e-3240.83Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A2P6N7K6_9EUKA1.140e-2745.03Protein kinase domain-containing protein n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78283contigM-pyrifera_M_contig78283:7..949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.4
Seed ortholog evalue6.2e-20
Seed eggNOG ortholog5786.XP_003283250.1
Preferred namePBK
KEGG koko:K08865
Hectar predicted targeting categoryother localisation
GOsGO:0000278,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009968,GO:0009987,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019220,GO:0019222,GO:0019538,GO:0023051,GO:0023057,GO:0030162,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031347,GO:0031348,GO:0031399,GO:0031400,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032434,GO:0032435,GO:0032872,GO:0032873,GO:0034644,GO:0036211,GO:0042176,GO:0042177,GO:0042325,GO:0042326,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043409,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045861,GO:0045936,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050727,GO:0050728,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051716,GO:0060255,GO:0061136,GO:0065007,GO:0070302,GO:0070303,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0104004,GO:0140096,GO:1901564,GO:1901799,GO:1902531,GO:1902532,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:2000058,GO:2000059
EggNOG free text desc.Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
EggNOG OGs3XDEU@554915,COG0515@1,COG5422@1,KOG0192@2759,KOG4424@2759
EC2.7.12.2
COG Functional cat.T
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Exons2
Model size612
Cds size582
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78283.18401.1prot_M-pyrifera_M_contig78283.18401.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig78283 7..919 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816684.3922436-CDS-M-pyrifera_M_contig78283:6..1171622816684.3922436-CDS-M-pyrifera_M_contig78283:6..117Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78283 7..117 -
1692278118.1422288-CDS-M-pyrifera_M_contig78283:6..1171692278118.1422288-CDS-M-pyrifera_M_contig78283:6..117Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78283 7..117 -
1622816684.4130712-CDS-M-pyrifera_M_contig78283:448..9191622816684.4130712-CDS-M-pyrifera_M_contig78283:448..919Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78283 449..919 -
1692278118.1556356-CDS-M-pyrifera_M_contig78283:448..9191692278118.1556356-CDS-M-pyrifera_M_contig78283:448..919Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig78283 449..919 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816684.4247918-UTR-M-pyrifera_M_contig78283:919..9491622816684.4247918-UTR-M-pyrifera_M_contig78283:919..949Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig78283 920..949 -
1692278118.1699016-UTR-M-pyrifera_M_contig78283:919..9491692278118.1699016-UTR-M-pyrifera_M_contig78283:919..949Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig78283 920..949 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig78283.18401.1

>prot_M-pyrifera_M_contig78283.18401.1 ID=prot_M-pyrifera_M_contig78283.18401.1|Name=mRNA_M-pyrifera_M_contig78283.18401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp
MLSQPKGNKPRKLIRQMTHALVNKEKVKKLTVSCEDPVVTQRLAATGGSN
AGVYSCLVDGFTCAMKELDLTHMDDFCIASFLGEIRLLELMPRHDNIVRY
LFHEETNDKIRLFMTQYSSVLGTEIQKRCKEEKPFGVQLAAKIALDIIKG
IEFLHDQGIIHRDLKSDNVFVLFDERKAIRRCAIGDFDTAKRLT
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mRNA from alignment at M-pyrifera_M_contig78283:7..949-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig78283.18401.1 ID=mRNA_M-pyrifera_M_contig78283.18401.1|Name=mRNA_M-pyrifera_M_contig78283.18401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=943bp|location=Sequence derived from alignment at M-pyrifera_M_contig78283:7..949- (Macrocystis pyrifera P11B4 male)
CGCATCGAGGAGCTGGAGGGCCGCCTCCTCATGCTATCGCAGCCCAAGGG CAACAAGCCCAGGAAGCTCATCAGGCAGATGACGCACGCGCTGGTGAACA AGGAGAAGGTGAAGAAGCTCACAGTGAGCTGTGAGGACCCTGTCGTCACG CAGAGGCTCGCGGCCACAGGCGGGAGCAACGCAGGCGTTTATTCGTGCCT CGTGGACGGCTTCACCTGTGCGATGAAGGAGCTCGACCTCACGCACATGG ACGACTTCTGCATTGCCTCATTCCTCGGCGAAATCCGCCTCCTCGAGTTG ATGCCACGCCACGACAACATTGTGAGGTATCTCTTCCATGAGGAGACCAA CGACAAGATCAGGCTCTTCATGACGCAGTACAGCAGCGTTCTCGGCACCG AGATCCAGAAGCGCTGCAAGGAAGAGAAGCCCTTCGGCGTCCAGCTGGCC GCCAAGATCGCCCTCGACATCATCAAGGGCATCGAGTTCCTCCACGACCA GGTAGGCGCGACGCTCTACGGAGAGCAGAGGGAGCATTGGTGTTGAGAGT GTGGGAGAGCGAGGGAGTGGGAGGAGAGAAGATGAGGGAGGAGAGAGATA GAGGAGAGGGAGAAGACTGCAAGAGTTGGCCGACCGAGAGAGAGAGAGTG TGTGTGAAGAGAGAGAGGGGCCACGGAAGAGAGAGAAGGAGGGAGGGAGA GAGAGAGAGGGGACATGGAAGAGAGAGAGGGGACACGGAAGAGAGAGAGA GAGAGACAGAGAGAGGAGGTGCGGAGGCCAGCTGCGAGCCAAAGAGTTGC GTGCGACTCCGGAGTCGGCCTGACAGGTGCAGGGCATCATCCACAGGGAT CTGAAGAGCGACAACGTCTTCGTGCTCTTCGATGAGCGGAAGGCCATCCG CCGCTGTGCAATCGGAGACTTCGACACAGCGAAGCGGCTCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig78283:7..949-

>mRNA_M-pyrifera_M_contig78283.18401.1 ID=mRNA_M-pyrifera_M_contig78283.18401.1|Name=mRNA_M-pyrifera_M_contig78283.18401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1164bp|location=Sequence derived from alignment at M-pyrifera_M_contig78283:7..949- (Macrocystis pyrifera P11B4 male)
ATGCTATCGCAGCCCAAGGGCAACAAGCCCAGGAAGCTCATCAGGCAGAT
GACGCACGCGCTGGTGAACAAGGAGAAGGTGAAGAAGCTCACAGTGAGCT
GTGAGGACCCTGTCGTCACGCAGAGGCTCGCGGCCACAGGCGGGAGCAAC
GCAGGCGTTTATTCGTGCCTCGTGGACGGCTTCACCTGTGCGATGAAGGA
GCTCGACCTCACGCACATGGACGACTTCTGCATTGCCTCATTCCTCGGCG
AAATCCGCCTCCTCGAGTTGATGCCACGCCACGACAACATTGTGAGGTAT
CTCTTCCATGAGGAGACCAACGACAAGATCAGGCTCTTCATGACGCAGTA
CAGCAGCGTTCTCGGCACCGAGATCCAGAAGCGCTGCAAGGAAGAGAAGC
CCTTCGGCGTCCAGCTGGCCGCCAAGATCGCCCTCGACATCATCAAGGGC
ATCGAGTTCCTCCACGACCAGATGCTATCGCAGCCCAAGGGCAACAAGCC
CAGGAAGCTCATCAGGCAGATGACGCACGCGCTGGTGAACAAGGAGAAGG
TGAAGAAGCTCACAGTGAGCTGTGAGGACCCTGTCGTCACGCAGAGGCTC
GCGGCCACAGGCGGGAGCAACGCAGGCGTTTATTCGTGCCTCGTGGACGG
CTTCACCTGTGCGATGAAGGAGCTCGACCTCACGCACATGGACGACTTCT
GCATTGCCTCATTCCTCGGCGAAATCCGCCTCCTCGAGTTGATGCCACGC
CACGACAACATTGTGAGGTATCTCTTCCATGAGGAGACCAACGACAAGAT
CAGGCTCTTCATGACGCAGTACAGCAGCGTTCTCGGCACCGAGATCCAGA
AGCGCTGCAAGGAAGAGAAGCCCTTCGGCGTCCAGCTGGCCGCCAAGATC
GCCCTCGACATCATCAAGGGCATCGAGTTCCTCCACGACCAGGGCATCAT
CCACAGGGATCTGAAGAGCGACAACGTCTTCGTGCTCTTCGATGAGCGGA
AGGCCATCCGCCGCTGTGCAATCGGAGACTTCGACACAGCGAAGCGGCTC
ACCGGCATCATCCACAGGGATCTGAAGAGCGACAACGTCTTCGTGCTCTT
CGATGAGCGGAAGGCCATCCGCCGCTGTGCAATCGGAGACTTCGACACAG
CGAAGCGGCTCACC
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