prot_M-pyrifera_M_contig78185.18383.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78185.18383.1
Unique Nameprot_M-pyrifera_M_contig78185.18383.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length142
Homology
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BLAST of mRNA_M-pyrifera_M_contig78185.18383.1 vs. uniprot
Match: A0A7S2QVS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVS3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.230e-7
Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = 0 
Query:   55 GRDAKCSWTDDSILVIQLGWGAKILPGDFLRIKGGVIRAK-DALPAAPTMSETELLPVVVPDDLIRPGVQISSPQKIGVCDTEAL 138
            G    CSW++   + I  G+G  ILPGD +R+KGG++++  +        SET LL    P D ++P   I SP  IGVCD  AL
Sbjct: 2479 GDSPVCSWSNSLEMSITFGFGPTILPGDKIRVKGGLLQSDWEGASLYMVASETLLLD---PPDPVKPETVIISPSSIGVCDVLAL 2560
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78185.18383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2QVS3_9STRA6.230e-740.00Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78185contigM-pyrifera_M_contig78185:529..954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78185.18383.1mRNA_M-pyrifera_M_contig78185.18383.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78185 529..954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78185.18383.1 ID=prot_M-pyrifera_M_contig78185.18383.1|Name=mRNA_M-pyrifera_M_contig78185.18383.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
LSVPFESNGRSLIVRFLQPPNRAGKTAGNVVCDNLVSVFFKKTPTLSASL
VTAFGRDAKCSWTDDSILVIQLGWGAKILPGDFLRIKGGVIRAKDALPAA
PTMSETELLPVVVPDDLIRPGVQISSPQKIGVCDTEALLDAS
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