mRNA_M-pyrifera_M_contig77575.18257.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig77575.18257.1
Unique NamemRNA_M-pyrifera_M_contig77575.18257.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A2E8B406_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8B406_9PLAN)

HSP 1 Score: 411 bits (1056), Expect = 1.180e-141
Identity = 195/252 (77.38%), Postives = 218/252 (86.51%), Query Frame = 1
Query:    7 EVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            EVMT+R PEGV RQ D  F  P VN+S   WHSCALFISDNVATQIDGL H+T+GEDNHWYNGF+E+DWGGNFGVRKCDATTIPPIVARGVLLDIA AR  DALP+ YGITP+DIDAA  +Q VELRPGD+VLIRTG LRYW  +G D +K+AEHDSAG+TLE ARYLVE +GAMMIG+DTSGLEV PA  ASDSFIPVH+YLL+EQGVHIAE H LE+LAR +VYEF Y+A TNKIAGTTAGFT+RPIAI+
Sbjct:  128 EVMTYRSPEGVSRQKDHSFADPAVNSSRTRWHSCALFISDNVATQIDGLAHITLGEDNHWYNGFKESDWGGNFGVRKCDATTIPPIVARGVLLDIAAARKVDALPAHYGITPADIDAARSKQGVELRPGDVVLIRTGTLRYWNTEGGDHEKIAEHDSAGLTLEGARYLVEQYGAMMIGSDTSGLEVGPAPRASDSFIPVHKYLLVEQGVHIAELHYLEDLARHRVYEFCYMASTNKIAGTTAGFTMRPIAIK 379          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A353ZC82_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353ZC82_9PLAN)

HSP 1 Score: 405 bits (1042), Expect = 6.470e-140
Identity = 189/254 (74.41%), Postives = 214/254 (84.25%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P EV+TFR PEGVKRQ D  FTLPD N SGQGWHSCALFI+DNV TQIDGLGHVTVGEDNHWYNGF+E+DWGGNFG+RKC A  IPPI+ARGV+LDIAG +   ALP  Y ITP+D+DAA +RQ   LRPGD+VL RTG L++WGEDG+DV+ L E+DSAGI LETA+YL+E  GAM+IGADTSGLEV PA   SD+FIPVH+YLLIEQGVHI EFHNLE LARDKVYEF Y+A T K+AGT AGF LRP+AIR
Sbjct:  100 PGEVITFRSPEGVKRQKDLDFTLPDKNPSGQGWHSCALFINDNVGTQIDGLGHVTVGEDNHWYNGFQESDWGGNFGIRKCSAANIPPIIARGVMLDIAGLKQMKALPPHYAITPADVDAACQRQGTVLRPGDVVLFRTGTLQFWGEDGADVETLKEYDSAGINLETAKYLIEQKGAMLIGADTSGLEVAPAPAGSDTFIPVHKYLLIEQGVHIGEFHNLEGLARDKVYEFCYVATTAKVAGTVAGFALRPLAIR 353          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A800JN05_9BACT (Cyclase family protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A800JN05_9BACT)

HSP 1 Score: 401 bits (1030), Expect = 3.760e-138
Identity = 185/254 (72.83%), Postives = 213/254 (83.86%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P EVMTFR PEGV RQ D  FT P VN+ G  WHSCALF++DNVATQIDGL H+TVG+DNHWYNGF+E+DWGGNFGVRKCDATTIPP+VARGV+LDIAG +G DAL S YGITP+DIDA++  Q VEL PGD V +RTG LRYW  DG+D +K+  HDSAGITL TA+YLVE +G MMIG+DTSGLE  PA   S +FIPVH YLL+EQGVHIAEFH LE+LA+DKVYEF Y+A TNKIAGTTAGFT+RPIA++
Sbjct:   96 PGEVMTFRSPEGVARQKDHDFTFPAVNSIGNRWHSCALFVNDNVATQIDGLAHITVGKDNHWYNGFKESDWGGNFGVRKCDATTIPPVVARGVMLDIAGFKGVDALESQYGITPADIDASMAAQKVELLPGDCVFVRTGTLRYWATDGADHEKITNHDSAGITLATAKYLVEKYGTMMIGSDTSGLEQQPAPEGSKTFIPVHNYLLVEQGVHIAEFHYLEDLAKDKVYEFCYVASTNKIAGTTAGFTMRPIAMK 349          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A2E1KGR6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E1KGR6_9PLAN)

HSP 1 Score: 388 bits (997), Expect = 2.520e-132
Identity = 178/254 (70.08%), Postives = 212/254 (83.46%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P E+MT+R PEG  RQ D  F  P+VN+SG  WHSCALFI+DNVATQIDGL HVTVG+D+HWYNG++EA+WGG+FGVRKCDATTIPP++ RGV+LDIAG  G   LP  YGI+P D+D A + Q + LRPGDIVL RTG L  WG+DGSD   LA+ DSAGITL+TA+YLVE FGA+M+G+DTSGLEV PA   SDSFIPVH+YLL+EQGVHIAEFH LE+LA+DKVYEF Y+ +TNKIAG+TAGFT+RP+AIR
Sbjct:  151 PGEIMTYRTPEGTSRQKDHDFIAPEVNSSGTRWHSCALFINDNVATQIDGLAHVTVGKDHHWYNGYKEAEWGGDFGVRKCDATTIPPVIGRGVMLDIAGLHGVRTLPPHYGISPKDVDNATKAQGIRLRPGDIVLFRTGTLSLWGKDGSDHPLLADADSAGITLQTAKYLVEKFGAIMVGSDTSGLEVAPAPEGSDSFIPVHKYLLVEQGVHIAEFHYLEDLAKDKVYEFCYVGITNKIAGSTAGFTMRPLAIR 404          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A2E7LAZ9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7LAZ9_9PLAN)

HSP 1 Score: 380 bits (976), Expect = 6.510e-130
Identity = 176/254 (69.29%), Postives = 208/254 (81.89%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P E+MTFR PEG  RQ D  F  P+VN+SG  WHSCALFI+DNVATQIDGL HVTVG+D+HWYNG++EA+WGG+FGVRKCDATTIPP++ RGV+LDIA       LP  YGI+P D+D AI+ Q V LRPGD+VL RTG L  WG+DG D   L + DSAGITL TA+YLVE FGA+MIG+DTSGLEV+PA   SDSFIPVH+YLL+EQGVHIAEFH LE+LA+D VYEF Y+ +TNKIAG+TAGFT+RP+AIR
Sbjct:   98 PGEIMTFRTPEGTSRQKDHDFIRPEVNSSGTRWHSCALFINDNVATQIDGLAHVTVGKDHHWYNGYKEAEWGGDFGVRKCDATTIPPVIGRGVMLDIAELHKVRTLPPHYGISPQDVDNAIKAQGVTLRPGDVVLFRTGTLSLWGKDGDDHPALTDADSAGITLPTAKYLVEKFGAIMIGSDTSGLEVSPAPEGSDSFIPVHKYLLVEQGVHIAEFHYLEDLAKDNVYEFCYVGITNKIAGSTAGFTMRPLAIR 351          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A6N8WHC4_9BACT (Cyclase family protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6N8WHC4_9BACT)

HSP 1 Score: 373 bits (957), Expect = 4.980e-128
Identity = 171/254 (67.32%), Postives = 204/254 (80.31%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P E+++FR PEGVKRQ D  FT P VN +   WHSCALFI+DNVATQID LGH+T GED+HWYNGF EA+WGGNFG+RK DA+TIPPIV RG+L+D+AG +G DALP    I   D+ AA+ERQ+ +L+PGD V +RTG LRYWGE G D  K+  HDSAGI LE A++LVE  GA+M+G+DTSGLEV PA P S SFIPVH YLL+EQGVH+AEFH LE+LA D+VYEF YIA TNKI G+TAGFT+RPIA+R
Sbjct:   31 PGEIISFRTPEGVKRQQDHGFTAPSVNPAELAWHSCALFINDNVATQIDSLGHITTGEDDHWYNGFTEAEWGGNFGIRKADASTIPPIVVRGILIDVAGHQGVDALPGGTAIGSRDLKAALERQSTQLKPGDAVFVRTGTLRYWGEAGGDHKKIGAHDSAGINLEAAKWLVEEKGAIMVGSDTSGLEVGPAPPGSTSFIPVHEYLLVEQGVHVAEFHYLEDLAADRVYEFCYIAATNKIKGSTAGFTMRPIALR 284          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A2E6AJW3_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E6AJW3_9PLAN)

HSP 1 Score: 371 bits (952), Expect = 2.780e-125
Identity = 176/254 (69.29%), Postives = 200/254 (78.74%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            PCEVMTFR P GV  Q D  FT    N S   WHSCALFISDNVATQI GL H TVG DNHWYNGF+E++WGG+FGVRKCDATTIPP VARGV+LD+A   G   LP  Y  TP D+  A   Q VEL+PGD+VLIRTG L  WG+DGS+ D +AE DSAGI L+ A++LVE  GA+MIG+DTSGLEV PA   SDSFIPVH+YLL+EQGVHIAEFH LE+LAR+KVYEF Y+ MTNKIAG+TAGFT+RPIAIR
Sbjct:  166 PCEVMTFRTPGGVASQQDHEFTAASXNPSRTHWHSCALFISDNVATQIXGLAHXTVGXDNHWYNGFKESEWGGDFGVRKCDATTIPPXVARGVMLDVAALHGVRTLPPXYAXTPEDLQQAQAAQKVELKPGDVVLIRTGTLSLWGQDGSNHDVIAESDSAGINLDAAKFLVEKCGAIMIGSDTSGLEVGPAPAGSDSFIPVHKYLLVEQGVHIAEFHYLEDLAREKVYEFCYVGMTNKIAGSTAGFTMRPIAIR 419          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A2V9RC19_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9RC19_9BACT)

HSP 1 Score: 365 bits (936), Expect = 7.770e-124
Identity = 168/254 (66.14%), Postives = 205/254 (80.71%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P E+++FR PEGVKRQ D  FTLP  N     WHSCALFISDNVATQIDGLGH+T G+DNHWYNGF+EADWGGN+G+RK DATTIP IVAR VL+D+AG +  DAL +   I   D+   +E +NV+++PGD V IRTG LRYWGE+GSD +K+  HD+AGI L++AR+LVE  GA++IG+DTSGLEV PA P S SF+PVH YLL++QGVHI EFH LE+L++DKVYEF YIA TNKI GTTAGFT+RPIA++
Sbjct:   98 PAEILSFRTPEGVKRQKDLDFTLPPGNKVALAWHSCALFISDNVATQIDGLGHITTGDDNHWYNGFKEADWGGNWGIRKADATTIPAIVARAVLIDVAGFQKVDALKAGTAIAVDDLKKTLEWENVDIQPGDAVFIRTGTLRYWGENGSDHEKIRAHDTAGINLDSARWLVEQKGAILIGSDTSGLEVAPAPPGSTSFVPVHEYLLVQQGVHIGEFHFLEQLSQDKVYEFCYIAATNKIKGTTAGFTMRPIALK 351          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A7V1RH70_9BACT (Cyclase family protein n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A7V1RH70_9BACT)

HSP 1 Score: 361 bits (927), Expect = 1.870e-122
Identity = 172/254 (67.72%), Postives = 196/254 (77.17%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P E++TFR PEGVKRQ D  FT    NA G  WHSC+LFISDNVATQIDGLGH+T G DNHWYNGFRE DWGG+FGVRKC A TIPPIV R VL+D+AG RG DALPS   ITP+ +  A+  Q   +RPGD V IRTG LRYWG  G+D DK+ EHDSAGI L++AR+LVE  GA++IG+DTSGLEV+PA   S SF PVH YLL+ QGVHI EFH LEELARD+ YEF Y+   NKI G TAGFTLRPIA+R
Sbjct:   99 PGEIITFRSPEGVKRQKDLDFTQGSGNALGTAWHSCSLFISDNVATQIDGLGHITAGADNHWYNGFREGDWGGDFGVRKCGAETIPPIVCRSVLIDVAGNRGVDALPSHTRITPAMLREALTAQGSRIRPGDAVFIRTGTLRYWGASGADHDKIREHDSAGIDLDSARWLVEQQGAVLIGSDTSGLEVSPAPEGSGSFNPVHDYLLVRQGVHIGEFHFLEELARDRAYEFAYVCGVNKIRGATAGFTLRPIALR 352          
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Match: A0A2H6ACQ3_9BACT (Uncharacterized protein n=1 Tax=bacterium HR36 TaxID=2035431 RepID=A0A2H6ACQ3_9BACT)

HSP 1 Score: 359 bits (921), Expect = 2.520e-121
Identity = 173/255 (67.84%), Postives = 196/255 (76.86%), Query Frame = 1
Query:    1 PCEVMTFRGPEGVKRQADQPFTLP-DVNASGQGWHSCALFISDNVATQIDGLGHVTVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGADALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKLAEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRYLLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR 762
            P EV+TFR PEG+ RQ D P  +   +N     WHSCALF+SDNV TQIDGL H+T G+D HWYNGFREA+WGGNFGVRKCDA TIPPIVARGVL+D+A  R  +ALPS Y I   D+  A++ Q VELRPGD+VLIRTG LRYWGEDG+D DKL  HDSAGI L  AR+LVE  GAM+IG+DTSGLE  P      SF+PVH YLL+EQGVHI EFH LEELARD+VYEF YI   NKI GTTAGF LRPIA+R
Sbjct:  113 PGEVITFRNPEGLIRQEDYPAVVDVQLNPRRLAWHSCALFLSDNVGTQIDGLAHITAGDDTHWYNGFREAEWGGNFGVRKCDAVTIPPIVARGVLIDVARFRQVEALPSHYRIRIEDLQGALKAQQVELRPGDVVLIRTGTLRYWGEDGADHDKLRAHDSAGIDLAAARWLVEQHGAMLIGSDTSGLEHTPGPNEPPSFLPVHYYLLVEQGVHIGEFHYLEELARDRVYEFCYICTVNKIRGTTAGFCLRPIALR 367          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig77575.18257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8B406_9PLAN1.180e-14177.38Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A353ZC82_9PLAN6.470e-14074.41Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A800JN05_9BACT3.760e-13872.83Cyclase family protein n=1 Tax=Verrucomicrobiales ... [more]
A0A2E1KGR6_9PLAN2.520e-13270.08Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E7LAZ9_9PLAN6.510e-13069.29Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A0A6N8WHC4_9BACT4.980e-12867.32Cyclase family protein (Fragment) n=1 Tax=Acidobac... [more]
A0A2E6AJW3_9PLAN2.780e-12569.29Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2V9RC19_9BACT7.770e-12466.14Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A7V1RH70_9BACT1.870e-12267.72Cyclase family protein n=1 Tax=Chthonomonadales ba... [more]
A0A2H6ACQ3_9BACT2.520e-12167.84Uncharacterized protein n=1 Tax=bacterium HR36 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig77575contigM-pyrifera_M_contig77575:240..1004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score322.4
Seed ortholog evalue1.9e-85
Seed eggNOG ortholog420324.KI912036_gene2523
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Metal-dependent hydrolase
EggNOG OGs1MVWU@1224,2TUQ1@28211,COG1878@1,COG1878@2
COG Functional cat.S
Best tax levelAlphaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size765
Cds size753
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816676.6288831-CDS-M-pyrifera_M_contig77575:239..9921622816676.6288831-CDS-M-pyrifera_M_contig77575:239..992Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77575 240..992 -
1692278113.4489672-CDS-M-pyrifera_M_contig77575:239..9921692278113.4489672-CDS-M-pyrifera_M_contig77575:239..992Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig77575 240..992 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816676.640027-UTR-M-pyrifera_M_contig77575:992..10041622816676.640027-UTR-M-pyrifera_M_contig77575:992..1004Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77575 993..1004 -
1692278113.4634326-UTR-M-pyrifera_M_contig77575:992..10041692278113.4634326-UTR-M-pyrifera_M_contig77575:992..1004Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig77575 993..1004 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig77575.18257.1prot_M-pyrifera_M_contig77575.18257.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig77575 240..992 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig77575.18257.1

>prot_M-pyrifera_M_contig77575.18257.1 ID=prot_M-pyrifera_M_contig77575.18257.1|Name=mRNA_M-pyrifera_M_contig77575.18257.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=251bp
MTFRGPEGVKRQADQPFTLPDVNASGQGWHSCALFISDNVATQIDGLGHV
TVGEDNHWYNGFREADWGGNFGVRKCDATTIPPIVARGVLLDIAGARGAD
ALPSSYGITPSDIDAAIERQNVELRPGDIVLIRTGVLRYWGEDGSDVDKL
AEHDSAGITLETARYLVEHFGAMMIGADTSGLEVNPAQPASDSFIPVHRY
LLIEQGVHIAEFHNLEELARDKVYEFTYIAMTNKIAGTTAGFTLRPIAIR
*
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mRNA from alignment at M-pyrifera_M_contig77575:240..1004-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig77575.18257.1 ID=mRNA_M-pyrifera_M_contig77575.18257.1|Name=mRNA_M-pyrifera_M_contig77575.18257.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=765bp|location=Sequence derived from alignment at M-pyrifera_M_contig77575:240..1004- (Macrocystis pyrifera P11B4 male)
CCTTGCGAAGTGATGACCTTCCGCGGACCCGAGGGCGTGAAACGTCAGGC CGATCAGCCATTCACGTTGCCCGATGTCAATGCAAGTGGGCAGGGTTGGC ATAGCTGTGCTTTGTTTATCAGCGACAACGTGGCCACGCAGATTGACGGG CTAGGGCATGTCACGGTTGGCGAGGACAACCACTGGTACAACGGGTTTCG CGAAGCCGATTGGGGTGGCAACTTCGGTGTAAGAAAGTGCGATGCCACGA CCATTCCCCCGATTGTCGCCCGTGGCGTGTTGTTGGATATTGCCGGCGCG CGGGGCGCCGATGCCTTGCCCAGCAGCTATGGCATCACCCCCAGCGATAT CGACGCCGCGATCGAGCGTCAGAATGTTGAACTACGGCCGGGGGATATCG TGCTCATCCGCACCGGTGTGCTGCGGTACTGGGGAGAAGATGGCTCCGAT GTGGACAAGCTAGCCGAGCACGACTCTGCAGGGATCACTTTGGAAACGGC TCGTTACCTGGTCGAACATTTTGGGGCCATGATGATTGGTGCCGACACCA GTGGCCTGGAGGTCAATCCGGCCCAGCCCGCCAGTGATTCGTTCATTCCC GTGCATCGTTACTTGTTGATCGAACAAGGCGTACACATCGCGGAGTTCCA CAACCTTGAAGAACTGGCCCGCGACAAGGTGTACGAGTTCACCTACATCG CCATGACCAACAAGATCGCCGGCACCACGGCAGGGTTTACGTTGCGACCG ATCGCAATTCGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig77575:240..1004-

>mRNA_M-pyrifera_M_contig77575.18257.1 ID=mRNA_M-pyrifera_M_contig77575.18257.1|Name=mRNA_M-pyrifera_M_contig77575.18257.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1506bp|location=Sequence derived from alignment at M-pyrifera_M_contig77575:240..1004- (Macrocystis pyrifera P11B4 male)
ATGACCTTCCGCGGACCCGAGGGCGTGAAACGTCAGGCCGATCAGCCATT
CACGTTGCCCGATGTCAATGCAAGTGGGCAGGGTTGGCATAGCTGTGCTT
TGTTTATCAGCGACAACGTGGCCACGCAGATTGACGGGCTAGGGCATGTC
ACGGTTGGCGAGGACAACCACTGGTACAACGGGTTTCGCGAAGCCGATTG
GGGTGGCAACTTCGGTGTAAGAAAGTGCGATGCCACGACCATTCCCCCGA
TTGTCGCCCGTGGCGTGTTGTTGGATATTGCCGGCGCGCGGGGCGCCGAT
GCCTTGCCCAGCAGCTATGGCATCACCCCCAGCGATATCGACGCCGCGAT
CGAGCGTCAGAATGTTGAACTACGGCCGGGGGATATCGTGCTCATCCGCA
CCGGTGTGCTGCGGTACTGGGGAGAAGATGGCTCCGATGTGGACAAGCTA
GCCGAGCACGACTCTGCAGGGATCACTTTGGAAACGGCTCGTTACCTGGT
CGAACATTTTGGGGCCATGATGATTGGTGCCGACACCAGTGGCCTGGAGG
TCAATCCGGCCCAGCCCGCCAGTGATTCGTTCATTCCCGTGCATCGTTAC
TTGTTGATCGAACAAGGCGTACACATCGCGGAGTTCCACAACCTTGAAGA
ACTGGCCCGCGACAAGGTGTACGAGTTCACCTACATCGCCATGACCAACA
AGATCGCCGGCACCACGGCAGGGTTTACGTTGCGACCGATCGCAATTCGC
TGAATGACCTTCCGCGGACCCGAGGGCGTGAAACGTCAGGCCGATCAGCC
ATTCACGTTGCCCGATGTCAATGCAAGTGGGCAGGGTTGGCATAGCTGTG
CTTTGTTTATCAGCGACAACGTGGCCACGCAGATTGACGGGCTAGGGCAT
GTCACGGTTGGCGAGGACAACCACTGGTACAACGGGTTTCGCGAAGCCGA
TTGGGGTGGCAACTTCGGTGTAAGAAAGTGCGATGCCACGACCATTCCCC
CGATTGTCGCCCGTGGCGTGTTGTTGGATATTGCCGGCGCGCGGGGCGCC
GATGCCTTGCCCAGCAGCTATGGCATCACCCCCAGCGATATCGACGCCGC
GATCGAGCGTCAGAATGTTGAACTACGGCCGGGGGATATCGTGCTCATCC
GCACCGGTGTGCTGCGGTACTGGGGAGAAGATGGCTCCGATGTGGACAAG
CTAGCCGAGCACGACTCTGCAGGGATCACTTTGGAAACGGCTCGTTACCT
GGTCGAACATTTTGGGGCCATGATGATTGGTGCCGACACCAGTGGCCTGG
AGGTCAATCCGGCCCAGCCCGCCAGTGATTCGTTCATTCCCGTGCATCGT
TACTTGTTGATCGAACAAGGCGTACACATCGCGGAGTTCCACAACCTTGA
AGAACTGGCCCGCGACAAGGTGTACGAGTTCACCTACATCGCCATGACCA
ACAAGATCGCCGGCACCACGGCAGGGTTTACGTTGCGACCGATCGCAATT
CGCTGA
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