mRNA_M-pyrifera_M_contig7576.17867.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A6H5JKU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU4_9PHAE) HSP 1 Score: 158 bits (399), Expect = 8.170e-45 Identity = 76/103 (73.79%), Postives = 89/103 (86.41%), Query Frame = 1 Query: 22 LPLFGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 LPLFGLD+P++RVH VDTPE ++ L +SV+MS+DTETQPSF VGEWHPTSLLQ+ATRDA GEEDVLVIDLLSLKDGL LP+ L+EAL+GPF SP V+KL Sbjct: 220 LPLFGLDIPEDRVHVVDTPEGVRDAAAVLGRSVLMSVDTETQPSFAVGEWHPTSLLQVATRDANGEEDVLVIDLLSLKDGLFLPESLSEALSGPFGSPSVVKL 322
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: D8LQB4_ECTSI (3\'-5\' exonuclease family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB4_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.040e-31 Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 1 Query: 124 MSIDTETQPSFKVGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 MSIDTETQPSF VGEWHPTSLLQ+ATRDA GEEDVLVIDLLSLKDGL LP+ L+EAL+GPF SP V+KL Sbjct: 1 MSIDTETQPSFAVGEWHPTSLLQVATRDADGEEDVLVIDLLSLKDGLLLPESLSEALSGPFGSPNVVKL 69
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A5D6YC74_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC74_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 9.180e-17 Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 25 PLFGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEW-HPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 P + +D +HFV + + QR LR ++VM DTET+P F+ G +P SLLQIA RDARG EDV V+DLL+LK P++ N ALA F S +VLKL Sbjct: 45 PAYSVDATS--IHFVASTDEWQRCVVRLRAAIVMGFDTETKPEFRAGRARNPCSLLQIAMRDARGAEDVFVLDLLALK-----PKLYNAALADIFLSKRVLKL 140
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A024TW10_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW10_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 8.440e-14 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 58 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFK-VGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 V F+ TP +L E LR +VV+ +DTET+P FK +PTSLLQ+A RDA G EDV + DLL+L P N+ LA F +P +LKL Sbjct: 56 VQFLHTPSQLAACHERLRTAVVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALT-----PSHYNDMLAELFLNPSILKL 142
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A418BAW1_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BAW1_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.280e-13 Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 58 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFK-VGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 V F+ TP +L E LR ++V+ +DTET+P FK +PTSLLQ+A RDA G EDV + DLL+L P N+ LA F +P +LKL Sbjct: 19 VQFLHTPSQLAACHERLRTAIVVGLDTETKPEFKKTAIPNPTSLLQVAVRDAHGAEDVFLFDLLALT-----PSHYNDMLAELFLNPSILKL 105
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A6G0XKK2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKK2_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.040e-13 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 58 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGE-WHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 V F+ +L +K+VV+ +DTET+P FK G +PTSLLQIATRD +G+EDV ++DLL+LK G N+ L+ F +P ++K+ Sbjct: 48 VQFISKASQLANCHACFQKAVVVGLDTETKPEFKKGAPQNPTSLLQIATRDKKGKEDVFILDLLALKPG-----DYNDMLSELFLAPSIVKM 134
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A485KTI5_9STRA (Aste57867_11637 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTI5_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 5.550e-13 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 49 KNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGE-WHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 + RV F+ P ++ E R +V++ +DTET+P F+ G + TSLLQIATRDA G+E+V + DLL+LK P N+ L+ F +P VLK+ Sbjct: 43 EKRVQFISDPSQVAYCHERFRDAVIIGLDTETKPEFQRGAPQNKTSLLQIATRDAAGKEEVFIFDLLALK-----PIHYNKMLSDVFLAPHVLKM 132
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A7S2XWB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWB0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.670e-12 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 31 FGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSF---KVGEWHPTSLLQIATRDARGEEDVLVIDLLSL 252 F D+P R+ F+D PE L + ETL +SV++ ID E++PSF + ++LQIATRD+ G EDV V+DL +L Sbjct: 69 FTFDLPAQRLRFIDRPEDLDFVKETLARSVLLGIDCESRPSFLGKRKSREQSVAILQIATRDSAGREDVFVLDLQTL 145
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A1V9YDW6_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDW6_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.940e-7 Identity = 37/92 (40.22%), Postives = 50/92 (54.35%), Query Frame = 1 Query: 58 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEW-HPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLKL 330 V FV + LR +V+ +DTET+P FK +P SLLQIA RDA+G E+V V+DLL+L NE L F + ++KL Sbjct: 38 VTFVGAATDIPHCNARLRDAVLAGLDTETKPEFKRNAARNPVSLLQIAVRDAKGVEEVFVLDLLALA-----VDDYNEMLTELFCASDIIKL 124
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Match: A0A7X7TZP8_9BACT (3'-5' exonuclease domain-containing protein 2 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X7TZP8_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 2.350e-7 Identity = 29/90 (32.22%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 58 VHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVGEWHPTSLLQIATRDARGEEDVLVIDLLSLKDGLRLPQVLNEALAGPFASPQVLK 327 +H + PE+++R + L K V+ DTET+P+F+VGE++P ++LQ+ GE+ + L + L+ AL G A+P+++K Sbjct: 18 IHVIRRPEQIERAVKQLEKETVLGFDTETRPTFRVGEYYPPAILQLV-----GEKAAYIFQLRHCR--------LSPALLGLLANPRIVK 94 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7576.17867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7576.17867.1 >prot_M-pyrifera_M_contig7576.17867.1 ID=prot_M-pyrifera_M_contig7576.17867.1|Name=mRNA_M-pyrifera_M_contig7576.17867.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp MLLLPLFGLDVPKNRVHFVDTPERLQRMGETLRKSVVMSIDTETQPSFKVback to top mRNA from alignment at M-pyrifera_M_contig7576:9923..10777+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7576.17867.1 ID=mRNA_M-pyrifera_M_contig7576.17867.1|Name=mRNA_M-pyrifera_M_contig7576.17867.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=855bp|location=Sequence derived from alignment at M-pyrifera_M_contig7576:9923..10777+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7576:9923..10777+ >mRNA_M-pyrifera_M_contig7576.17867.1 ID=mRNA_M-pyrifera_M_contig7576.17867.1|Name=mRNA_M-pyrifera_M_contig7576.17867.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig7576:9923..10777+ (Macrocystis pyrifera P11B4 male)back to top |