mRNA_M-pyrifera_M_contig75650.17843.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: W2MQM0_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2MQM0_PHYPR) HSP 1 Score: 97.1 bits (240), Expect = 3.170e-22 Identity = 52/128 (40.62%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SG+DG+G++ E VT H T FD + GL ++ RL +LEKEIDP+ R K + T+ K + D + L +K P +T+K T DPAAG++D+++++YE+GDD+ +RTIA+AW+ S+ Sbjct: 99 SGIDGVGNLPKENVTCHFTKTSFDLKIVGLDN-KNFRLFKQHLEKEIDPAKSSFRVKKNRVTISLHKADKNDTWMNLTAKNPLKTSKP----DTSDPAAGIMDMMKNMYEEGDDEMKRTIAKAWTESR 221
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: H3GHM6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHM6_PHYRM) HSP 1 Score: 95.5 bits (236), Expect = 1.190e-21 Identity = 50/128 (39.06%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SG+DG+G + E +T H T FD + GL G ++ RL+ +LEKEIDP+ +R K + T+ K + + L +K P +T+K T DP+AG++D+++++Y++GDD+ +RTIA+AWS S+ Sbjct: 97 SGIDGVGDLPKENITCHFTKTSFDLKIIGLDG-KNYRLLKQHLEKEIDPAKSSIRAKKNRVTVSLYKADKDTTWMNLTAKNPVKTSKP----DTSDPSAGIMDMMKNMYDEGDDEMKRTIAKAWSESR 219
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A833T3P9_PHYIN (CS domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T3P9_PHYIN) HSP 1 Score: 92.0 bits (227), Expect = 2.680e-20 Identity = 49/128 (38.28%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SG+DG+G++ E VT H T FD + GL ++ RL+ NLEKEIDP R K + T+ K + + + L +K P +T+K T DP+AG++D+++++Y++GDD+ +R+IA+AW+ S+ Sbjct: 99 SGIDGVGNLPQENVTCHFTKTSFDLKIIGLDS-KNYRLVKHNLEKEIDPVKSSFRVKKNRVTISLYKADKNNMWMNLTAKNPLKTSKP----DTSDPSAGIMDMMKNMYDEGDDEMKRSIAKAWTESR 221
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A3M6V8A6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8A6_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.550e-20 Identity = 50/128 (39.06%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SG+DG+G++ E VT T FD + GL ++ RL+ +LEKEIDP R K + T+ K + + + L +K P +T+K T DP AG++D+++++YE+GDD+ +RTIA+AWS S+ Sbjct: 96 SGIDGVGNLPKEKVTCQFTKTSFDLKIIGLEN-KNYRLVKQHLEKEIDPLKSSFRVKKNRITISLHKMEKNNTWMNLTAKNPLKTSKP----DTTDPGAGIMDMMKNMYEEGDDEMKRTIAKAWSESR 218
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A329SNY2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNY2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.250e-19 Identity = 48/128 (37.50%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SG+DG+G++ E+VT H T FD + L ++ RL +LEKEIDP+ R K + T+ K + D + L +K P + +K T DPAAG++D+++++Y++GD++ +RTIA+AW+ S+ Sbjct: 91 SGIDGVGNLPKESVTCHFTKSSFDLKIIELDN-KNYRLFKQHLEKEIDPAKSSFRVKKNRVTISLHKADKNDTWMNLTAKNPLKASKP----DTSDPAAGIMDMMKNMYDEGDEEMKRTIAKAWTESR 213
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A2D4BPY2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPY2_PYTIN) HSP 1 Score: 90.9 bits (224), Expect = 1.300e-19 Identity = 49/128 (38.28%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SG+DG+G + E VT T FD + GL GG++ RL+ +L+KEID S VR K + + K+ +++ + L +K P + A DPAAG++D+++++Y++GDD+ +RTIA+AWS S+ Sbjct: 126 SGIDGVGDLPKENVTCQFTKDSFDLKILGL-GGKNYRLVKHHLDKEIDASKSSVRVKKNRVAITLWKQDKHNSWMNLTAKNPNKPRGA----NASDPAAGIMDMMKEMYDEGDDEMKRTIAKAWSESR 248
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A6A4FPS2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FPS2_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.950e-19 Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRD---VRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SGVDG+G++ E VT H T FD + GL RL +LEKEIDP+ R K + T+ K + + + L +K P +++K T DPAAG++D+++++Y +GDD+ +RTIA+AWS S+ Sbjct: 97 SGVDGVGNLPKENVTCHFTKTSFDLKIIGLENKNYRCIARLFKQHLEKEIDPAKSSFRVKKNRVTISLHKADKDNTWMNLTAKNPLKSSKP----DTSDPAAGIMDMMKNMYAEGDDEMKRTIAKAWSESR 223
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A3F2S4P0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4P0_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.710e-18 Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAW--SRSKGGSIA 399 SG+DG+G++ E V T FD + GL G ++ RLI NLEKEIDP R K + T+ K + + + L +K P K K + DP AG++ +++D+Y+ GDD+ +RTIA+AW SR K G+ A Sbjct: 101 SGIDGVGALPKENVACQFTKTSFDLKIIGL-GNKNYRLIKQNLEKEIDPKRSSFRVKKNRVTISLIKADKDNTWMNLTAKNP---TKGSSKPDSADPTAGIMGMMKDMYDQGDDEMKRTIAKAWTESRDKNGATA 231
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A484EEV0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEV0_BRELC) HSP 1 Score: 87.0 bits (214), Expect = 2.230e-18 Identity = 48/128 (37.50%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SGV+G+G++ E VT H FD + GL ++ RL+ +LEKEIDP +R K + T+ RK + + + L +K +++K + DPAAG++D+++++Y++GDD +RTIA+AWS S+ Sbjct: 99 SGVEGVGNLPKENVTCHFGKSSFDLKIIGLDN-KNYRLVKQHLEKEIDPLKSSIRVKKNRVTILLRKADKNNTWMNLTAKNSLKSSKP----DSSDPAAGIMDMMKNMYDEGDDDMKRTIAKAWSESR 221
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Match: A0A6G0XU43_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XU43_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.530e-17 Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 1 SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSDIRVRRKADSATLRFRKKRQYDRFFKLISKKPRRTAKAKKKSTTDDPAAGVVDVLRDLYEDGDDKTRRTIAEAWSRSK 384 SG+DG+GS+ +T T FD + K L G + RL+ NL+KEIDP + K + T+ K + L SK ++K K + DP+AG++D+++++Y++GDD+ +RTIA+AWS S+ Sbjct: 95 SGIDGVGSLPSNQLTCDFTTRSFDLKIKQL-NGNNYRLVRYNLDKEIDPKKSKFVAKKNRVTITLIKSDTNSTWMNLTSK----SSKPTDKPASTDPSAGIMDMMKNMYDEGDDEMKRTIAKAWSESR 217 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75650.17843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75650.17843.1 >prot_M-pyrifera_M_contig75650.17843.1 ID=prot_M-pyrifera_M_contig75650.17843.1|Name=mRNA_M-pyrifera_M_contig75650.17843.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp SGVDGIGSVSDEAVTLHATPFGFDFQAKGLPGGRDVRLIVDNLEKEIDPSback to top mRNA from alignment at M-pyrifera_M_contig75650:1..405+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75650.17843.1 ID=mRNA_M-pyrifera_M_contig75650.17843.1|Name=mRNA_M-pyrifera_M_contig75650.17843.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=405bp|location=Sequence derived from alignment at M-pyrifera_M_contig75650:1..405+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75650:1..405+ >mRNA_M-pyrifera_M_contig75650.17843.1 ID=mRNA_M-pyrifera_M_contig75650.17843.1|Name=mRNA_M-pyrifera_M_contig75650.17843.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig75650:1..405+ (Macrocystis pyrifera P11B4 male)back to top |