prot_M-pyrifera_M_contig7546.17803.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig7546.17803.1
Unique Name	prot_M-pyrifera_M_contig7546.17803.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	71

Homology

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BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.870e-25
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVASTNRGCKAI QGGG R+ +LKDGITRAPCLRMPD + AA +K+W E   NF  +KAAFE+TT+FG
Sbjct:  250 GCLVASTNRGCKAISQGGGARSVVLKDGITRAPCLRMPDTIGAARVKQWVEAPANFARVKAAFESTTSFG 319

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BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.350e-23
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVASTNRGCKAI   GG RA +LKDGITRAPC+ MP AMAAA LK W E+ +NF AI+ AF +TT+FG
Sbjct:  126 GCLVASTNRGCKAITACGGARARVLKDGITRAPCILMPSAMAAADLKAWVEEPENFQAIQNAFNSTTSFG 195

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BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A7S2EB74_TRICV (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB74_TRICV)

HSP 1 Score: 101 bits (252), Expect = 1.700e-23
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVAS NRGCKAI QGGG R+A+++DGITRAPC+RM  AM AA LK W ED  NF  +K+AFE+TT+FG
Sbjct:  347 GCLVASANRGCKAISQGGGARSAVIRDGITRAPCVRMRSAMEAAELKLWCEDPANFARLKSAFESTTSFG 416

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BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A1Z5KS57_FISSO (3-hydroxy-3-methylglutaryl coenzyme A reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS57_FISSO)

HSP 1 Score: 99.4 bits (246), Expect = 1.080e-22
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVASTNRG KAI +GGG  A +++DGITRAPC+RMP AMAAA LK W E  +NF  +KAAFE+TT+FG
Sbjct:  275 GCLVASTNRGAKAITEGGGALAQIVRDGITRAPCIRMPTAMAAAQLKLWCETPENFVQMKAAFESTTSFG 344

[Close]

BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: B8C0R4_THAPS (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0R4_THAPS)

HSP 1 Score: 97.8 bits (242), Expect = 1.280e-22
Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVASTNRGCKAI QG G R+ +L+DGITRAPC+R+P A  AA +  W E+ DNF  +K AFE+TT+FG
Sbjct:   55 GCLVASTNRGCKAITQGSGARSTILRDGITRAPCVRLPSAHEAAQVHLWIEEADNFAKLKEAFESTTSFG 124

[Close]

BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A7R9ZC66_9STRA (Hydroxymethylglutaryl-CoA reductase (NADPH) (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZC66_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.530e-22
Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVAS NRGCKAI QG G  + +++DGITRAPC+RM  A  AA LK W ED DNF ++K AFE+TT+FG
Sbjct:  188 GCLVASANRGCKAISQGSGAVSTVVRDGITRAPCVRMRSAREAAELKLWCEDPDNFASLKKAFESTTSFG 257

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BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A7S4ALR6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALR6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.480e-21
Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVAS+NRG KAI QGGG +A +++DGITRAPCLRM  AM AA LK W E   NF  +K AFE+TT+FG
Sbjct:  320 GCLVASSNRGAKAITQGGGAKARIVRDGITRAPCLRMDSAMEAADLKIWCEQPSNFAVLKKAFESTTSFG 389

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BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: B7GE13_PHATC (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE13_PHATC)

HSP 1 Score: 94.0 bits (232), Expect = 3.450e-21
Identity = 46/70 (65.71%), Postives = 52/70 (74.29%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVASTNRG KAI  GGG  A LL+DGITRAPC+RMP A  AA LK W E   +F  +K AFE+TT+FG
Sbjct:   54 GCLVASTNRGAKAITAGGGATAVLLRDGITRAPCVRMPSAAQAAHLKLWCETPQHFSTLKRAFESTTSFG 123

[Close]

BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A7S2I1A6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1A6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.210e-21
Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVASTNRGCKAI QG G  + +L+DGITRAPC+RM  A  AA LK W E  +NF  +K AFE+TT+FG
Sbjct:  207 GCLVASTNRGCKAITQGSGATSVILRDGITRAPCVRMSSAKQAADLKLWCEQPNNFATLKQAFESTTSFG 276

[Close]

BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Match: A0A7S1YA95_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YA95_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.620e-20
Identity = 47/70 (67.14%), Postives = 52/70 (74.29%), Query Frame = 0

Query:    1 GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWFEDKDNFDAIKAAFETTTNFG 70
            GCLVAST RG KAI QGGG  A +LKDGITRAPC+RM  A  AA LK W E   NF  +KAAFE+TT+FG
Sbjct:  341 GCLVASTQRGAKAITQGGGATAVVLKDGITRAPCVRMASAADAAKLKLWCEVPQNFQQLKAAFESTTSFG 410

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig7546.17803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YX65_9STRA	1.870e-25	71.43	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S1Y0Q7_9STRA	1.350e-23	70.00	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S2EB74_TRICV	1.700e-23	68.57	3-hydroxy-3-methylglutaryl coenzyme A reductase (F...	[more]
A0A1Z5KS57_FISSO	1.080e-22	68.57	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
B8C0R4_THAPS	1.280e-22	64.29	3-hydroxy-3-methylglutaryl coenzyme A reductase (F...	[more]
A0A7R9ZC66_9STRA	7.530e-22	64.29	Hydroxymethylglutaryl-CoA reductase (NADPH) (Fragm...	[more]
A0A7S4ALR6_9STRA	2.480e-21	65.71	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
B7GE13_PHATC	3.450e-21	65.71	3-hydroxy-3-methylglutaryl coenzyme A reductase (F...	[more]
A0A7S2I1A6_9STRA	4.210e-21	64.29	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S1YA95_9STRA	1.620e-20	67.14	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PFAM	PF00368	HMG-CoA_red	coord: 1..71 e-value: 3.4E-17 score: 62.5
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PANTHER	PTHR10572	3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE	coord: 1..70
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PROSITE	PS50065	HMG_COA_REDUCTASE_4	coord: 1..71 score: 18.481
IPR009023	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily	GENE3D	3.30.70.420		coord: 28..71 e-value: 7.1E-9 score: 37.9
IPR009023	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily	SUPERFAMILY	55035	NAD-binding domain of HMG-CoA reductase	coord: 28..70
None	No IPR available	PANTHER	PTHR10572:SF2	3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE	coord: 1..70
IPR009029	Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily	SUPERFAMILY	56542	Substrate-binding domain of HMG-CoA reductase	coord: 1..25

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig7546	contig	M-pyrifera_M_contig7546:12145..12357 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig7546.17803.1	mRNA_M-pyrifera_M_contig7546.17803.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig7546 12145..12357 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig7546.17803.1 ID=prot_M-pyrifera_M_contig7546.17803.1|Name=mRNA_M-pyrifera_M_contig7546.17803.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp
GCLVASTNRGCKAIGQGGGCRAALLKDGITRAPCLRMPDAMAAAGLKRWF
EDKDNFDAIKAAFETTTNFGE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002202	HMG_CoA_Rdtase
IPR009023	HMG_CoA_Rdtase_NAD(P)-bd_sf
IPR009029	HMG_CoA_Rdtase_sub-bd_dom_sf