mRNA_M-pyrifera_M_contig75188.17755.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75188.17755.1
Unique NamemRNA_M-pyrifera_M_contig75188.17755.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: A0A7S1GE03_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE03_9STRA)

HSP 1 Score: 491 bits (1263), Expect = 2.000e-170
Identity = 242/295 (82.03%), Postives = 265/295 (89.83%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHYAEIQ+VDE++D  AA RMGIE VGQV VMIHSGSRGLGHQVATDAL EME AM RD + VNDRQL+CA + S EG+ YL  M+AAANYAWVNR+SMTFLTRQAFAK+F + PDDLDM VVYDVSHNIAK+EEH+VDGR RKLLVHRKG+TRAFPPHHPLIP DYQF GQPVL+GG+MGTCSYVLTGTEKGM +TFGSTCHGAGRA SRAKSRRTLDY  VL KL+E+GISIRVASPKLVMEEAP+SYKDVT VVDTCH AGISKK +KLRP+AVVKG
Sbjct:  218 AKKRGLPQLGTLGAGNHYAEIQIVDEIYDTHAAGRMGIEQVGQVCVMIHSGSRGLGHQVATDALNEMEKAMVRDRIEVNDRQLACARITSTEGQNYLKSMAAAANYAWVNRSSMTFLTRQAFAKMFNSTPDDLDMHVVYDVSHNIAKVEEHIVDGRLRKLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTEKGMAETFGSTCHGAGRAHSRAKSRRTLDYHEVLRKLEEKGISIRVASPKLVMEEAPESYKDVTAVVDTCHAAGISKKVIKLRPVAVVKG 512
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: A0A7S0MDZ5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MDZ5_9CRYP)

HSP 1 Score: 481 bits (1237), Expect = 2.550e-168
Identity = 237/295 (80.34%), Postives = 264/295 (89.49%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHYAEIQVVDE+FD+ AA++MGI+  GQVV+MIHSGSRGLGHQVATDAL  M+ AMARD +  NDRQLSCA + S+EG+ YL+GM+AAANYAWVNR+SMTFL RQAFAK F T PDDLDM VVYDVSHNIAK EEHLVDG+ ++LLVHRKG+TRAFPPHHPLIP DYQF GQPVL+GGSMGTCSYVLTGT+KGM +TFGSTCHGAGRA SR +SR  L Y+ VLDKL +QGISIRVASPKLVMEEAP+SYKDVTQVVDTCH AGISKK VKLRPIAV+KG
Sbjct:   95 AKKRGLPQLGTLGAGNHYAEIQVVDEIFDRHAASQMGIDEKGQVVIMIHSGSRGLGHQVATDALTIMDRAMARDRIATNDRQLSCARIDSQEGQDYLAGMAAAANYAWVNRSSMTFLVRQAFAKAFATTPDDLDMHVVYDVSHNIAKEEEHLVDGKFKRLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGSMGTCSYVLTGTDKGMVETFGSTCHGAGRALSRNRSRNNLQYQDVLDKLSDQGISIRVASPKLVMEEAPESYKDVTQVVDTCHAAGISKKAVKLRPIAVIKG 389
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: A0A194RB85_PAPMA (RNA-splicing ligase RtcB homolog n=7 Tax=Neoptera TaxID=33340 RepID=A0A194RB85_PAPMA)

HSP 1 Score: 483 bits (1242), Expect = 2.520e-167
Identity = 236/295 (80.00%), Postives = 266/295 (90.17%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHYAEIQVVDE+FDK AA++MG+E  GQVVVMIHSGSRG GHQVATDALVEME AM RD++ VNDRQL+CA + S EG+ YL  M+AAAN+AWVNR+SMTFLTRQAFAK F  APDDLDM V+YDVSHNIAKIEEH+VDG+ + LLVHRKG+TRAFPPHHPLIP DYQ  GQPVL+GGSMGTCSYVLTGT++GMT+TFG+TCHGAGRA SRAKSRR +DY+ VL+KL+  GISIRVASPKLVMEEAP+SYK+VT VVDTCH AGISKKTVKLRPIAV+KG
Sbjct:  212 AKKRGLPQLGTLGAGNHYAEIQVVDEIFDKYAASKMGLERTGQVVVMIHSGSRGFGHQVATDALVEMEKAMKRDKIEVNDRQLACARINSVEGQNYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFKMAPDDLDMHVIYDVSHNIAKIEEHVVDGKVKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGSMGTCSYVLTGTQQGMTETFGTTCHGAGRALSRAKSRRNIDYKDVLNKLESMGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 506
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: A0A7T8HKN5_CALRO (tRNA-splicing ligase RtcB -like protein n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=A0A7T8HKN5_CALRO)

HSP 1 Score: 476 bits (1225), Expect = 3.330e-167
Identity = 232/295 (78.64%), Postives = 266/295 (90.17%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AK+RG+PQLGTLGAGNHYAEIQVVDE+FDK AA+ MGI+ +GQ+VVMIH GSRG GHQVATDALV+ME AM RD + VNDRQL+CA + S+EG+ YL GM+AAAN+AWVNR+SMTFLTRQAFAKVF ++PDDLDM V+YDVSHNIAK+EEHLVDG+ + LLVHRKG+TRAFPPHHPLIP D+Q  GQPVL+GG+MG+CSYVLTGTEKGM  TFGSTCHGAGRA SRAKSRR LDY+AVLD L+++GISIRVASPKLVMEEAP+SYKDVT VV+TCH AGISKK VKLRPI V+KG
Sbjct:   49 AKRRGLPQLGTLGAGNHYAEIQVVDEIFDKFAASSMGIDQLGQIVVMIHCGSRGFGHQVATDALVQMEKAMKRDNILVNDRQLACARIHSKEGQDYLKGMAAAANFAWVNRSSMTFLTRQAFAKVFDSSPDDLDMHVIYDVSHNIAKMEEHLVDGKLKSLLVHRKGSTRAFPPHHPLIPVDFQLTGQPVLIGGTMGSCSYVLTGTEKGMQQTFGSTCHGAGRAWSRAKSRRNLDYQAVLDDLEKKGISIRVASPKLVMEEAPESYKDVTDVVNTCHAAGISKKAVKLRPIGVIKG 343
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: A0A194PDY6_PAPXU (RNA-splicing ligase RtcB homolog n=10 Tax=Obtectomera TaxID=104431 RepID=A0A194PDY6_PAPXU)

HSP 1 Score: 481 bits (1239), Expect = 7.180e-167
Identity = 235/295 (79.66%), Postives = 266/295 (90.17%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHYAEIQVVDE+FDK AA++MG+E  GQVVVMIHSGSRG GHQVATDALVEME AM RD++ VNDRQL+CA + S EG+ YL  M+AAAN+AWVNR+SMTFLTRQAFAK F  APDDLDM V+YDVSHNIAKIEEH+VDG+ + LLVHRKG+TRAFPPHHPLIP DYQ  GQPVL+GGSMGTCSYVLTGT++GMT+TFG+TCHGAGRA SR+KSRR +DY+ VL+KL+  GISIRVASPKLVMEEAP+SYK+VT VVDTCH AGISKKTVKLRPIAV+KG
Sbjct:  212 AKKRGLPQLGTLGAGNHYAEIQVVDEIFDKYAASKMGLERTGQVVVMIHSGSRGFGHQVATDALVEMEKAMKRDKIEVNDRQLACARINSVEGQNYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFKMAPDDLDMHVIYDVSHNIAKIEEHVVDGKVKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGSMGTCSYVLTGTQQGMTETFGTTCHGAGRALSRSKSRRNIDYKDVLNKLESMGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 506
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: A0A7J8JLY7_ROUAE (RNA 2',3'-cyclic phosphate and 5'-OH ligase n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8JLY7_ROUAE)

HSP 1 Score: 473 bits (1217), Expect = 2.170e-166
Identity = 230/295 (77.97%), Postives = 264/295 (89.49%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHYAEIQVVDE+F++ AA +MGI+  GQV VMIHSGSRGLGHQVATDALV ME AM RD++ VNDRQL+CA + S EG+ YL GM+AA NYAWVNR+SMTFLTRQAFAKVF T PDDLD+ V+YDVSHNIAK+E+H+VDG+ R LLVHRKG+TRAFPPHHPLI  DYQ  GQPVL+GG+MGTCSYVLTGTE+GMT+TFG+TCHGAGRA SRAKSRR LD++ VLDKL + GI+IRVASPKLVMEEAP+SYK+VT VV+TCHDAGISKK +KLRPIAV+KG
Sbjct:   23 AKKRGLPQLGTLGAGNHYAEIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG 317
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: A0A8J4PQT2_9MYCE (RNA-splicing ligase RtcB homolog n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQT2_9MYCE)

HSP 1 Score: 479 bits (1232), Expect = 8.020e-166
Identity = 228/295 (77.29%), Postives = 264/295 (89.49%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHY E+QVVDE+F+K AA++MGI+ VGQV VMIHSGSRG+GHQVATD+L  ME AMARD +H+ND+QL+C+ + S+EG+ YLSGM+AAAN+AWVNR SMTFL RQAFAK F +APDDLDM V+YDVSHNIAK EEH+VDGRP+KLLVHRKGATRAFPPHHPLIP DYQF GQPVL+GG+MGTCSYVLTGTE GM +TFGSTCHGAGR+ SR KSR  L YE VLD L+ +GISIR+ASPKL+MEEAP+SYKDV QV++TCH AGIS+KTVKLRPIAV+KG
Sbjct:  211 AKKRGLPQLGTLGAGNHYLEVQVVDEIFNKTAASKMGIDQVGQVCVMIHSGSRGMGHQVATDSLTLMEKAMARDHIHLNDKQLACSRINSQEGQDYLSGMAAAANFAWVNRQSMTFLARQAFAKAFNSAPDDLDMHVIYDVSHNIAKFEEHMVDGRPKKLLVHRKGATRAFPPHHPLIPVDYQFTGQPVLIGGTMGTCSYVLTGTELGMKETFGSTCHGAGRSISRNKSRNNLSYEGVLDSLQSKGISIRIASPKLIMEEAPESYKDVVQVIETCHKAGISQKTVKLRPIAVIKG 505
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: UPI00187DA5D4 (RNA-splicing ligase RtcB homolog n=1 Tax=Bradysia coprophila TaxID=38358 RepID=UPI00187DA5D4)

HSP 1 Score: 473 bits (1218), Expect = 8.190e-166
Identity = 231/295 (78.31%), Postives = 262/295 (88.81%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHYAEIQ VDE++DK AA++MGIE  GQV VMIHSGSRG GHQVATDALV+ME AM RD++  NDRQL+CA ++S EG+ YL  M+AAAN+AWVNR+SMTFLTRQAFAK F T PDDLDM V+YDVSHN+AKIEEH+VDG+ + LLVHRKGATRAFPPHHPLIP DYQF GQPVLVGG+MGTCSYVLTGTEKGM++TFGSTCHGAGRA SRAKSRR LDY  VL+ +K  GI+IRVASPKLVMEEAP+SYK+VT VVDTCH AGISKK ++LRPIAV+KG
Sbjct:   70 AKKRGLPQLGTLGAGNHYAEIQEVDEIYDKFAASKMGIEDKGQVCVMIHSGSRGFGHQVATDALVQMEKAMKRDKIETNDRQLACARIKSTEGQDYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFKTTPDDLDMHVIYDVSHNVAKIEEHMVDGKQKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVLVGGTMGTCSYVLTGTEKGMSETFGSTCHGAGRALSRAKSRRNLDYLDVLENMKSLGIAIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKCIELRPIAVIKG 364
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: RTCB_DROME (RNA-splicing ligase RtcB homolog n=58 Tax=Brachycera TaxID=7203 RepID=RTCB_DROME)

HSP 1 Score: 479 bits (1232), Expect = 8.300e-166
Identity = 233/295 (78.98%), Postives = 264/295 (89.49%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            AKKRG+PQLGTLGAGNHYAEIQVVDE++DK +A++MGIE  GQVVVMIHSGSRG GHQVATDALV+ME AM RD++  NDRQL+CA + S EG+ YL  M+AAAN+AWVNR+SMTFLTRQAFAK+F T PDDLDM V+YDVSHNIAK+E H+VDG+ RKLLVHRKG+TRAFPPHHPLIP DYQ  GQPVLVGG+MGTCSYVLTGTE+GM +TFGSTCHGAGRA SRAKSRR LDY+ VLDKL + GI+IRVASPKLVMEEAP+SYKDVT VVDTCH AGISKK +K+RPIAV+KG
Sbjct:  212 AKKRGLPQLGTLGAGNHYAEIQVVDEIYDKWSASKMGIEEKGQVVVMIHSGSRGFGHQVATDALVQMEKAMKRDKIETNDRQLACARINSVEGQDYLKAMAAAANFAWVNRSSMTFLTRQAFAKMFNTTPDDLDMHVIYDVSHNIAKVENHMVDGKERKLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLVGGTMGTCSYVLTGTEQGMQETFGSTCHGAGRALSRAKSRRNLDYKDVLDKLDQLGIAIRVASPKLVMEEAPESYKDVTDVVDTCHAAGISKKCIKMRPIAVIKG 506
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BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Match: J9JML1_ACYPI (RNA-splicing ligase RtcB homolog n=11 Tax=Aphididae TaxID=27482 RepID=J9JML1_ACYPI)

HSP 1 Score: 479 bits (1232), Expect = 8.300e-166
Identity = 232/295 (78.64%), Postives = 265/295 (89.83%), Query Frame = 1 
Query:    1 AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHSGSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGMSAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEEHLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSYVLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIRVASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG 885
            A+KRG+PQLGTLGAGNHYAEIQVVDEV+DK AA +MGIE VGQV VMIHSGSRG GHQVATDAL+EME AMARD++ VNDRQL+CA + S EG+ YL  MSAAAN+AWVNR+SMTFL RQAFAK F   PDDLDM V+YDVSHNIAK+E+H +DG+P+ LLVHRKG+TRAFPP+HPLIP DYQ  GQPVL+GG+MGTCSYVLTGTE+GM +TFGSTCHGAGRA SRAKSRR +DY  VL+KL++QGI+IRVASPKLVMEEAP+SYK+VT VVDTCH+AGISKKTVKLRPIAV+KG
Sbjct:  212 ARKRGLPQLGTLGAGNHYAEIQVVDEVYDKWAAKKMGIENVGQVCVMIHSGSRGFGHQVATDALLEMEKAMARDKIEVNDRQLACARINSNEGQNYLKAMSAAANFAWVNRSSMTFLARQAFAKQFKLTPDDLDMHVIYDVSHNIAKMEQHYIDGKPKHLLVHRKGSTRAFPPYHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMNETFGSTCHGAGRALSRAKSRRNIDYNDVLEKLQKQGIAIRVASPKLVMEEAPESYKNVTDVVDTCHEAGISKKTVKLRPIAVIKG 506
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75188.17755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1GE03_9STRA2.000e-17082.03RNA-splicing ligase RtcB homolog n=1 Tax=Bicosoeci... [more]
A0A7S0MDZ5_9CRYP2.550e-16880.34Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A194RB85_PAPMA2.520e-16780.00RNA-splicing ligase RtcB homolog n=7 Tax=Neoptera ... [more]
A0A7T8HKN5_CALRO3.330e-16778.64tRNA-splicing ligase RtcB -like protein n=1 Tax=Ca... [more]
A0A194PDY6_PAPXU7.180e-16779.66RNA-splicing ligase RtcB homolog n=10 Tax=Obtectom... [more]
A0A7J8JLY7_ROUAE2.170e-16677.97RNA 2',3'-cyclic phosphate and 5'-OH ligase n=1 Ta... [more]
A0A8J4PQT2_9MYCE8.020e-16677.29RNA-splicing ligase RtcB homolog n=1 Tax=Polysphon... [more]
UPI00187DA5D48.190e-16678.31RNA-splicing ligase RtcB homolog n=1 Tax=Bradysia ... [more]
RTCB_DROME8.300e-16678.98RNA-splicing ligase RtcB homolog n=58 Tax=Brachyce... [more]
J9JML1_ACYPI8.300e-16678.64RNA-splicing ligase RtcB homolog n=11 Tax=Aphidida... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75188contigM-pyrifera_M_contig75188:171..1058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score484.2
Seed ortholog evalue4.4e-134
Seed eggNOG ortholog8049.ENSGMOP00000020279
Preferred nameRTCB
KEGG koko:K14415
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000378,GO:0000394,GO:0000968,GO:0000971,GO:0001701,GO:0001890,GO:0002119,GO:0002164,GO:0003006,GO:0003674,GO:0003824,GO:0003972,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0007275,GO:0007276,GO:0007281,GO:0008033,GO:0008092,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009790,GO:0009791,GO:0009792,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0012505,GO:0016020,GO:0016070,GO:0016874,GO:0016886,GO:0017166,GO:0019219,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031323,GO:0031325,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0040025,GO:0042175,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046483,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048569,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0071704,GO:0072669,GO:0080090,GO:0090304,GO:0098827,GO:0140098,GO:1901360,GO:1903326,GO:1903328,GO:2000235,GO:2000237
EggNOG free text desc.Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'- phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs
EggNOG OGs38CK6@33154,3BD7J@33208,3CV3F@33213,48A0A@7711,4958A@7742,49S9P@7898,COG1690@1,KOG3833@2759
EC6.5.1.3
COG Functional cat.J
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons1
Model size888
Cds size888
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816650.1276906-CDS-M-pyrifera_M_contig75188:170..10581622816650.1276906-CDS-M-pyrifera_M_contig75188:170..1058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75188 171..1058 -
1692278098.7219217-CDS-M-pyrifera_M_contig75188:170..10581692278098.7219217-CDS-M-pyrifera_M_contig75188:170..1058Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75188 171..1058 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75188.17755.1prot_M-pyrifera_M_contig75188.17755.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75188 171..1058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75188.17755.1

>prot_M-pyrifera_M_contig75188.17755.1 ID=prot_M-pyrifera_M_contig75188.17755.1|Name=mRNA_M-pyrifera_M_contig75188.17755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp
AKKRGIPQLGTLGAGNHYAEIQVVDEVFDKVAAARMGIETVGQVVVMIHS
GSRGLGHQVATDALVEMESAMARDEVHVNDRQLSCALLRSEEGKRYLSGM
SAAANYAWVNRASMTFLTRQAFAKVFTTAPDDLDMAVVYDVSHNIAKIEE
HLVDGRPRKLLVHRKGATRAFPPHHPLIPTDYQFIGQPVLVGGSMGTCSY
VLTGTEKGMTDTFGSTCHGAGRAASRAKSRRTLDYEAVLDKLKEQGISIR
VASPKLVMEEAPDSYKDVTQVVDTCHDAGISKKTVKLRPIAVVKG*
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mRNA from alignment at M-pyrifera_M_contig75188:171..1058-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75188.17755.1 ID=mRNA_M-pyrifera_M_contig75188.17755.1|Name=mRNA_M-pyrifera_M_contig75188.17755.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig75188:171..1058- (Macrocystis pyrifera P11B4 male)
GCGAAAAAACGCGGCATTCCTCAGCTGGGCACTTTGGGGGCTGGGAATCA
CTATGCGGAGATCCAGGTGGTGGACGAGGTGTTTGACAAAGTTGCAGCGG
CGAGAATGGGCATTGAGACGGTGGGCCAGGTGGTGGTGATGATCCATTCT
GGGTCGCGAGGGTTGGGGCATCAGGTGGCGACGGATGCGTTGGTGGAGAT
GGAGAGCGCGATGGCGAGGGATGAGGTGCATGTGAACGACAGGCAGCTGT
CCTGTGCACTGTTGCGGAGCGAAGAAGGGAAGCGGTATTTGAGTGGCATG
AGTGCTGCCGCGAATTATGCGTGGGTGAACAGGGCTTCGATGACGTTTTT
AACGCGCCAAGCCTTTGCCAAAGTGTTCACCACGGCTCCAGACGACCTGG
ACATGGCTGTGGTGTACGATGTGAGCCACAACATTGCCAAAATCGAGGAG
CATCTGGTGGACGGCAGGCCCAGAAAACTCCTTGTGCATCGCAAAGGTGC
CACTCGCGCCTTCCCACCCCACCACCCGCTCATCCCAACAGACTACCAGT
TCATTGGACAGCCTGTGCTGGTTGGAGGCTCCATGGGCACGTGCTCCTAT
GTCCTCACTGGAACGGAAAAGGGCATGACGGATACTTTCGGATCCACATG
CCACGGAGCAGGGAGGGCGGCATCCAGAGCAAAGTCCAGAAGAACGCTCG
ATTACGAAGCGGTGCTTGACAAGCTCAAGGAACAGGGCATTTCCATCCGA
GTCGCATCCCCCAAACTCGTCATGGAAGAAGCGCCAGACTCCTACAAGGA
CGTCACCCAAGTCGTCGACACATGCCACGACGCAGGAATCTCAAAGAAAA
CCGTGAAACTCAGACCAATCGCAGTCGTGAAAGGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig75188:171..1058-

>mRNA_M-pyrifera_M_contig75188.17755.1 ID=mRNA_M-pyrifera_M_contig75188.17755.1|Name=mRNA_M-pyrifera_M_contig75188.17755.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1776bp|location=Sequence derived from alignment at M-pyrifera_M_contig75188:171..1058- (Macrocystis pyrifera P11B4 male)
GCGAAAAAACGCGGCATTCCTCAGCTGGGCACTTTGGGGGCTGGGAATCA
CTATGCGGAGATCCAGGTGGTGGACGAGGTGTTTGACAAAGTTGCAGCGG
CGAGAATGGGCATTGAGACGGTGGGCCAGGTGGTGGTGATGATCCATTCT
GGGTCGCGAGGGTTGGGGCATCAGGTGGCGACGGATGCGTTGGTGGAGAT
GGAGAGCGCGATGGCGAGGGATGAGGTGCATGTGAACGACAGGCAGCTGT
CCTGTGCACTGTTGCGGAGCGAAGAAGGGAAGCGGTATTTGAGTGGCATG
AGTGCTGCCGCGAATTATGCGTGGGTGAACAGGGCTTCGATGACGTTTTT
AACGCGCCAAGCCTTTGCCAAAGTGTTCACCACGGCTCCAGACGACCTGG
ACATGGCTGTGGTGTACGATGTGAGCCACAACATTGCCAAAATCGAGGAG
CATCTGGTGGACGGCAGGCCCAGAAAACTCCTTGTGCATCGCAAAGGTGC
CACTCGCGCCTTCCCACCCCACCACCCGCTCATCCCAACAGACTACCAGT
TCATTGGACAGCCTGTGCTGGTTGGAGGCTCCATGGGCACGTGCTCCTAT
GTCCTCACTGGAACGGAAAAGGGCATGACGGATACTTTCGGATCCACATG
CCACGGAGCAGGGAGGGCGGCATCCAGAGCAAAGTCCAGAAGAACGCTCG
ATTACGAAGCGGTGCTTGACAAGCTCAAGGAACAGGGCATTTCCATCCGA
GTCGCATCCCCCAAACTCGTCATGGAAGAAGCGCCAGACTCCTACAAGGA
CGTCACCCAAGTCGTCGACACATGCCACGACGCAGGAATCTCAAAGAAAA
CCGTGAAACTCAGACCAATCGCAGTCGTGAAAGGGTGAGCGAAAAAACGC
GGCATTCCTCAGCTGGGCACTTTGGGGGCTGGGAATCACTATGCGGAGAT
CCAGGTGGTGGACGAGGTGTTTGACAAAGTTGCAGCGGCGAGAATGGGCA
TTGAGACGGTGGGCCAGGTGGTGGTGATGATCCATTCTGGGTCGCGAGGG
TTGGGGCATCAGGTGGCGACGGATGCGTTGGTGGAGATGGAGAGCGCGAT
GGCGAGGGATGAGGTGCATGTGAACGACAGGCAGCTGTCCTGTGCACTGT
TGCGGAGCGAAGAAGGGAAGCGGTATTTGAGTGGCATGAGTGCTGCCGCG
AATTATGCGTGGGTGAACAGGGCTTCGATGACGTTTTTAACGCGCCAAGC
CTTTGCCAAAGTGTTCACCACGGCTCCAGACGACCTGGACATGGCTGTGG
TGTACGATGTGAGCCACAACATTGCCAAAATCGAGGAGCATCTGGTGGAC
GGCAGGCCCAGAAAACTCCTTGTGCATCGCAAAGGTGCCACTCGCGCCTT
CCCACCCCACCACCCGCTCATCCCAACAGACTACCAGTTCATTGGACAGC
CTGTGCTGGTTGGAGGCTCCATGGGCACGTGCTCCTATGTCCTCACTGGA
ACGGAAAAGGGCATGACGGATACTTTCGGATCCACATGCCACGGAGCAGG
GAGGGCGGCATCCAGAGCAAAGTCCAGAAGAACGCTCGATTACGAAGCGG
TGCTTGACAAGCTCAAGGAACAGGGCATTTCCATCCGAGTCGCATCCCCC
AAACTCGTCATGGAAGAAGCGCCAGACTCCTACAAGGACGTCACCCAAGT
CGTCGACACATGCCACGACGCAGGAATCTCAAAGAAAACCGTGAAACTCA
GACCAATCGCAGTCGTGAAAGGGTGA
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