prot_M-pyrifera_M_contig7329.17383.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7329.17383.1
Unique Nameprot_M-pyrifera_M_contig7329.17383.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length76
Homology
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BLAST of mRNA_M-pyrifera_M_contig7329.17383.1 vs. uniprot
Match: D7FMY7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY7_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 8.530e-24
Identity = 57/68 (83.82%), Postives = 59/68 (86.76%), Query Frame = 0 
Query:   10 SYHFHVPLM-QAAASKNSRTRIACLSELSRCIDVDGAASALGKKGLKELAKHVDSDQAEVRSAALDAV 76
            SY  + PL+ QA ASKNSRTRIACL ELSRCI  DG ASALGKKGLKELAKHVDSDQAEVRSAALDAV
Sbjct: 1413 SYAKYSPLLLQATASKNSRTRIACLLELSRCIGADGPASALGKKGLKELAKHVDSDQAEVRSAALDAV 1480
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BLAST of mRNA_M-pyrifera_M_contig7329.17383.1 vs. uniprot
Match: W7TIC8_9STRA (Microtubule associated protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIC8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.860e-11
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 0 
Query:    1 VLCILLPDSSYHFHVPLMQAAASKNSRTRIACLSELSRCIDVDGAASALGKKGLKELAKHVDSDQAEVRSAALDAV 76
            ++C L P S Y  +  L+ A  +KN R+R ACL E  R +D  G ASALGK+GL+E+ K++D+ + EVRSAAL+ +
Sbjct:    3 LVCDLYPFSKYGPY--LVAALGTKNLRSRAACLDECRRLLDY-GPASALGKRGLREIGKYLDAREPEVRSAALEVI 75
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7329.17383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMY7_ECTSI8.530e-2483.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TIC8_9STRA1.860e-1147.37Microtubule associated protein n=1 Tax=Nannochloro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 7..76
e-value: 4.0E-10
score: 41.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7329contigM-pyrifera_M_contig7329:2421..3554 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7329.17383.1mRNA_M-pyrifera_M_contig7329.17383.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7329 2421..3554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7329.17383.1 ID=prot_M-pyrifera_M_contig7329.17383.1|Name=mRNA_M-pyrifera_M_contig7329.17383.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
VLCILLPDSSYHFHVPLMQAAASKNSRTRIACLSELSRCIDVDGAASALG
KKGLKELAKHVDSDQAEVRSAALDAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like