mRNA_M-pyrifera_M_contig73190.17368.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A518C2F7_9BACT (Putative ATP-dependent helicase DinG n=11 Tax=Pirellulaceae TaxID=2691357 RepID=A0A518C2F7_9BACT) HSP 1 Score: 301 bits (772), Expect = 7.620e-97 Identity = 146/149 (97.99%), Postives = 148/149 (99.33%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSYDMLRNCASRVSRWMS+ GYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVI+DPRVQTKGYGRAFLKALPE Sbjct: 504 TSYDMLRNCASRVSRWMSQNGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVILDPRVQTKGYGRAFLKALPE 652
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A2S8GNU4_9BACT (Helicase n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GNU4_9BACT) HSP 1 Score: 296 bits (758), Expect = 4.460e-95 Identity = 142/149 (95.30%), Postives = 147/149 (98.66%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSYDMLR+CASRVSRWMS GYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGH+DKG+VVI+DPR+QTKGYGRAFLKALPE Sbjct: 473 TSYDMLRSCASRVSRWMSHNGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHADKGMVVILDPRIQTKGYGRAFLKALPE 621
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A5C5VKU7_9BACT (Putative ATP-dependent helicase DinG n=6 Tax=Blastopirellula TaxID=265487 RepID=A0A5C5VKU7_9BACT) HSP 1 Score: 236 bits (601), Expect = 1.470e-71 Identity = 112/149 (75.17%), Postives = 131/149 (87.92%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSY+MLR AS ++RW+S++G LFSQSDGMPR MV+KFK++ +VLFGTDSFWQGVDVPGDALQNVIITKLPFSVPD PLLQARL +IKE+GGQPF +YQLPEA+IKLRQGFGRLIR D GIVVI+DPRV+TK YG+ FLK+LP+ Sbjct: 506 TSYEMLRWAASSLTRWLSQEGIELFSQSDGMPRSVMVEKFKQSEKAVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDQPLLQARLERIKEQGGQPFGQYQLPEAVIKLRQGFGRLIRTQEDSGIVVILDPRVKTKSYGKVFLKSLPD 654
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A3B8ZKE9_9PLAN (Helicase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8ZKE9_9PLAN) HSP 1 Score: 222 bits (566), Expect = 2.370e-70 Identity = 104/149 (69.80%), Postives = 124/149 (83.22%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSY MLR+ AS++ W ++ TL+SQ+DG+PRGQ+++KFK P LFGTDSFWQGVDVPGDAL NVIITKLPFS+PDHPLLQARL+ I++ GG PF +YQ+PEA+IKLRQGFGRLIR D+GIVVI+DPRV TK YGR FL ALPE Sbjct: 127 TSYGMLRSTASKMQPWFAQHQLTLYSQADGLPRGQLLEKFKANPRGALFGTDSFWQGVDVPGDALGNVIITKLPFSMPDHPLLQARLDAIRQAGGNPFRDYQIPEAVIKLRQGFGRLIRTAQDRGIVVILDPRVVTKSYGRQFLSALPE 275
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A2G2KEI0_9BACT (Helicase n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2KEI0_9BACT) HSP 1 Score: 230 bits (586), Expect = 1.480e-69 Identity = 109/148 (73.65%), Postives = 127/148 (85.81%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALP 444 T+Y+M+RN AS ++ W++ + LFSQ DGMPR QM++KFK+T +VLFGTDSFWQGVDVPGDALQNVIITKLPFSVPD PLLQARL QIK RGGQPF EYQLPEA+IKLRQGFGRLIR +D GIVVI+DPRV TK YG+ FL++LP Sbjct: 476 TNYEMMRNAASSLTHWLASENIALFSQDDGMPRHQMLEKFKQTDRAVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDQPLLQARLEQIKARGGQPFMEYQLPEAVIKLRQGFGRLIRSTTDTGIVVILDPRVTTKRYGKIFLESLP 623
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A7C2JZS6_9PLAN (Helicase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2JZS6_9PLAN) HSP 1 Score: 212 bits (539), Expect = 8.830e-68 Identity = 96/149 (64.43%), Postives = 120/149 (80.54%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSY ML+NC R+ W ++ Y ++ Q + +PR +++KF+ P VLFGTDSFWQGVDVPGDALQNVII KLPFSVPDHPLL+AR+ IK RGG PF+EYQ+PEA+IKL+QGFGRLIR +D G+V I+DPRV+TK YGR FL++LPE Sbjct: 24 TSYRMLQNCVRRLQPWFTQHNYGVYVQGNDLPRNLLLEKFRRDPAGVLFGTDSFWQGVDVPGDALQNVIIAKLPFSVPDHPLLEARVEAIKSRGGNPFNEYQVPEAVIKLKQGFGRLIRTRTDTGMVAILDPRVRTKPYGRIFLESLPE 172
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A353BAV3_9PLAN (Helicase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353BAV3_9PLAN) HSP 1 Score: 221 bits (563), Expect = 2.810e-66 Identity = 101/148 (68.24%), Postives = 125/148 (84.46%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALP 444 TSY +LRN AS++ W++E L+SQ+DG PRGQ++++FK P LFGTDSFWQGVDVPGDAL+NVIITKLPFSVPDHPLL+ARL+ I++ GG PF +YQ+PEA+IKLRQGFGRLIR +DKGIVVI+D R+QTK YGR F++ALP Sbjct: 466 TSYGLLRNMASKMQAWLTEHDLALYSQADGSPRGQLLEQFKRNPRGALFGTDSFWQGVDVPGDALRNVIITKLPFSVPDHPLLEARLDAIRQAGGNPFKDYQIPEAVIKLRQGFGRLIRTATDKGIVVILDSRIQTKHYGRTFMEALP 613
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A2E7CXP7_9PLAN (Helicase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CXP7_9PLAN) HSP 1 Score: 221 bits (563), Expect = 5.220e-66 Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSY M+RNCA+R+SRWM+E+ L+ Q DG+PR +M++KFK+ VLFGT+SFWQGVDVPGD+LQNVIITKLPFSVPDHPLL+ARL IK GG PF EYQ+PEA+IKL+QGFGRLIR +D G VVI+DPRV+TK YG+ FL++LP+ Sbjct: 499 TSYKMMRNCAARLSRWMTEENLGLYCQGDGLPRSKMLEKFKDDDAGVLFGTESFWQGVDVPGDSLQNVIITKLPFSVPDHPLLEARLEAIKAGGGNPFMEYQVPEAVIKLKQGFGRLIRRKTDTGQVVILDPRVRTKRYGQLFLQSLPD 647
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: A0A3M1S9E6_9BACT (Helicase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1S9E6_9BACT) HSP 1 Score: 211 bits (536), Expect = 9.600e-66 Identity = 96/149 (64.43%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSYD++R A+ ++ W+ ++GY LFSQ+DG+PR +++ +FK++P VLFGTDSFWQGVDVPG+ LQNVIITKLPF+VPD PL +AR+ I+ GG PF +YQ+PEA IKL+QGFGRLIR SD GIVVI+DPRV TK YGR FL++LPE Sbjct: 119 TSYDLMRRTATALNDWLMDRGYDLFSQADGVPRTRLLARFKQSPHGVLFGTDSFWQGVDVPGEQLQNVIITKLPFAVPDRPLTEARMEAIRAAGGNPFRDYQMPEAAIKLKQGFGRLIRSRSDTGIVVILDPRVVTKPYGRFFLESLPE 267
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Match: UPI00029A08E3 (DEAD/DEAH box helicase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029A08E3) HSP 1 Score: 219 bits (559), Expect = 2.110e-65 Identity = 102/149 (68.46%), Postives = 121/149 (81.21%), Query Frame = 1 Query: 1 TSYDMLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFWQGVDVPGDALQNVIITKLPFSVPDHPLLQARLNQIKERGGQPFSEYQLPEAIIKLRQGFGRLIRGHSDKGIVVIMDPRVQTKGYGRAFLKALPE 447 TSY MLRNCA R++ W K Y L+SQ + MPR +++KF+ P VLFG +SFWQGVDVPGDALQNVIITKLPFSVPDHPLL+ARL I+ GG PF +YQ+PEA+IKL+QGFGRLIR SDKGIVVI+DPRV+TK YG+ FL +LPE Sbjct: 510 TSYQMLRNCARRLTSWFVSKNYGLYSQGEEMPRTMLLEKFRNDPAGVLFGAESFWQGVDVPGDALQNVIITKLPFSVPDHPLLEARLEAIRNSGGNPFMDYQVPEAVIKLKQGFGRLIRTKSDKGIVVILDPRVKTKRYGKLFLDSLPE 658 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73190.17368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73190.17368.1 >prot_M-pyrifera_M_contig73190.17368.1 ID=prot_M-pyrifera_M_contig73190.17368.1|Name=mRNA_M-pyrifera_M_contig73190.17368.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp MLRNCASRVSRWMSEKGYTLFSQSDGMPRGQMVQKFKETPGSVLFGTDSFback to top mRNA from alignment at M-pyrifera_M_contig73190:661..1107- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73190.17368.1 ID=mRNA_M-pyrifera_M_contig73190.17368.1|Name=mRNA_M-pyrifera_M_contig73190.17368.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig73190:661..1107- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73190:661..1107- >mRNA_M-pyrifera_M_contig73190.17368.1 ID=mRNA_M-pyrifera_M_contig73190.17368.1|Name=mRNA_M-pyrifera_M_contig73190.17368.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig73190:661..1107- (Macrocystis pyrifera P11B4 male)back to top |