mRNA_M-pyrifera_M_contig73185.17365.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73185.17365.1
Unique NamemRNA_M-pyrifera_M_contig73185.17365.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: UPI001D14D652 (efflux RND transporter permease subunit n=1 Tax=Gimesia benthica TaxID=2608982 RepID=UPI001D14D652)

HSP 1 Score: 559 bits (1441), Expect = 2.490e-199
Identity = 292/299 (97.66%), Postives = 295/299 (98.66%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGSTLFSKLKDRLPALR 897
            RIRVPHDRRGSL+NIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQ+RLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANP+A KGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAG EDPV EGEGSTL SKLKDRLPALR
Sbjct:   89 RIRVPHDRRGSLENIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQERLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPQARKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGAEDPVPEGEGSTLLSKLKDRLPALR 387          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A518A7Y2_9PLAN (Cobalt-zinc-cadmium resistance protein CzcA n=8 Tax=Gimesia TaxID=1649453 RepID=A0A518A7Y2_9PLAN)

HSP 1 Score: 518 bits (1334), Expect = 4.790e-174
Identity = 270/299 (90.30%), Postives = 282/299 (94.31%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGSTLFSKLKDRLPALR 897
            RIRVP DRRGSL  IASLQLIS+KKT DGQAQYVPLTAIADV+MSSE+AAISHFNGERMNEVQAYIKAGVLPAKVLADFQ +L+Q+G+ LPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGL     ILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRAS+GDR+VVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAY++VMCRNCPLR G E+ V EGE STLFSKLKD LPALR
Sbjct:  757 RIRVPQDRRGSLSQIASLQLISNKKTEDGQAQYVPLTAIADVKMSSEVAAISHFNGERMNEVQAYIKAGVLPAKVLADFQTKLKQSGFTLPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLXXXXXILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASQGDRIVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYLIVMCRNCPLRKGAEEQVPEGEESTLFSKLKDSLPALR 1055          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A518IE15_9PLAN (Cobalt-zinc-cadmium resistance protein CzcA n=3 Tax=Gimesia TaxID=1649453 RepID=A0A518IE15_9PLAN)

HSP 1 Score: 515 bits (1326), Expect = 8.560e-173
Identity = 265/299 (88.63%), Postives = 286/299 (95.65%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGSTLFSKLKDRLPALR 897
            RIRVPH+RRGS+++IASLQLISSKKT DGQ+Q+VPLTAIA V+MSSE+AAISHFNGERMNEVQAYIKAGVLPAKVLADFQ  ++QAG+ELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVA LVG VG+LSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANP + KG+RVVVRDVVLRSTRHVVATSLTTVAGF+PLV+AGGGFWPPLAITIAGGVGGATLLALY+IPSAYILVMCRNCPLRA V +PVSE +G+TL SKLK+RLP LR
Sbjct:  762 RIRVPHNRRGSINDIASLQLISSKKTSDGQSQFVPLTAIAQVQMSSEVAAISHFNGERMNEVQAYIKAGVLPAKVLADFQANMKQAGFELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAALVGTVGLLSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPESRKGNRVVVRDVVLRSTRHVVATSLTTVAGFVPLVIAGGGFWPPLAITIAGGVGGATLLALYYIPSAYILVMCRNCPLRATVGEPVSEEQGATLLSKLKERLPVLR 1060          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A350KFW2_9PLAN (Acriflavine resistance protein B (Fragment) n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KFW2_9PLAN)

HSP 1 Score: 486 bits (1251), Expect = 4.840e-168
Identity = 253/299 (84.62%), Postives = 274/299 (91.64%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGSTLFSKLKDRLPALR 897
            RIRVP  RR S+++IASLQLIS K T DGQ Q+VPLTAIA+V+MSSE+AAISHFNGERMNEVQAY+KAGVLPA+ LA+FQ +L+QAG+ELPPGYRLEWGGEASKRDDAVGNL+ANVGVLMVLMVATLVLSF+SFRVA LVG VGILSIGLGLGMLWLFGFPFGFMAIVGS+ LAGVAINDAIVVLAELRANP A KG+RVVVRDVVLRSTRHVVATSLTTVAGF PLV+AGGGFWPPLAITIAGGVGGATLLALY+IPSAYILVMCR CPLRA V +PV     S+L SKLKDRLP LR
Sbjct:  248 RIRVPQARRASVNDIASLQLISRKNTEDGQPQFVPLTAIAEVKMSSEVAAISHFNGERMNEVQAYLKAGVLPAEALAEFQSKLKQAGFELPPGYRLEWGGEASKRDDAVGNLLANVGVLMVLMVATLVLSFASFRVAALVGTVGILSIGLGLGMLWLFGFPFGFMAIVGSIRLAGVAINDAIVVLAELRANPEARKGNRVVVRDVVLRSTRHVVATSLTTVAGFAPLVIAGGGFWPPLAITIAGGVGGATLLALYYIPSAYILVMCRQCPLRAKVGEPVQADRESSLLSKLKDRLPVLR 546          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A6CAC4_9PLAN (Uncharacterized protein n=13 Tax=Planctomycetaceae TaxID=126 RepID=A6CAC4_9PLAN)

HSP 1 Score: 489 bits (1260), Expect = 5.440e-163
Identity = 255/299 (85.28%), Postives = 275/299 (91.97%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGSTLFSKLKDRLPALR 897
            RIRVP  RR S+++IASLQLIS K T DGQ Q+VPLTAIA+V+MSSE+AAISHFNGERMNEVQAY+KAGVLPA+ LA+FQ +L+QAG+ELPPGYRLEWGGEASKRDDAVGNL+ANVGVLMVLMVATLVLSF+SFRVA LVG VGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANP A KG+RVVVRDVVLRSTRHVVATSLTTVAGF PLV+AGGGFWPPLAITIAGGVGGATLLALY+IPSAYILVMCR CPLRA V +PV     S+L SKLKDRLP LR
Sbjct:  757 RIRVPQARRASVNDIASLQLISRKITEDGQPQFVPLTAIAEVKMSSEVAAISHFNGERMNEVQAYLKAGVLPAEALAEFQSKLKQAGFELPPGYRLEWGGEASKRDDAVGNLLANVGVLMVLMVATLVLSFASFRVAALVGTVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPEARKGNRVVVRDVVLRSTRHVVATSLTTVAGFAPLVIAGGGFWPPLAITIAGGVGGATLLALYYIPSAYILVMCRQCPLRAKVGEPVQADRESSLLSKLKDRLPVLR 1055          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A517WZW4_9PLAN (Cobalt-zinc-cadmium resistance protein CzcA n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WZW4_9PLAN)

HSP 1 Score: 486 bits (1250), Expect = 1.860e-161
Identity = 253/303 (83.50%), Postives = 276/303 (91.09%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPV----SEGEGSTLFSKLKDRLPALR 897
            RIRVPHD+RG++ +IASLQLIS KKT DGQAQYVPLTAIA V MSSE+AAISHFNGERMNEVQAYIKAGVLPA+VL +F+  L+ AG++LP GYR EWGGEASKRDDAVGNL+ NVGVLMVLMVATLVLSFSSFRVAGLVG+VG LSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANP A  G+RVVVRDVVLRSTRHVVATSLTTVAGF+PLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPL+A  E+ +    SE + +T+ +KLK+RLP LR
Sbjct:  757 RIRVPHDQRGAIADIASLQLISRKKTADGQAQYVPLTAIAKVEMSSEVAAISHFNGERMNEVQAYIKAGVLPAEVLTEFKSNLKDAGFQLPAGYRFEWGGEASKRDDAVGNLLVNVGVLMVLMVATLVLSFSSFRVAGLVGSVGFLSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPEARIGNRVVVRDVVLRSTRHVVATSLTTVAGFLPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLKATTEESIVKEKSEAQQATILAKLKERLPVLR 1059          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A517ZMC5_9PLAN (Nickel and cobalt resistance protein CnrA n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZMC5_9PLAN)

HSP 1 Score: 351 bits (901), Expect = 6.570e-110
Identity = 182/265 (68.68%), Postives = 219/265 (82.64%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVM 795
            R+RV ++ R  L  I SL+L+ +    DG+   VPL+AIADV +++EI+AI  FNG RMNEVQ +I AGVLPA VL  FQ+RL++A +E+PPGY  E+GGE  KRDDA+GNLMA+VGVL+VLM+ATLVLSF SFRVA LVG VG+LS+GLGLG L +FG PFGFMAI+GSMGLAGVAINDAIVVLA LR +P A +GD + VR+VV  STRHVVATSLTT+AGF PLV+AGGGFWPP+AI I+GGVGGAT+LALYFIPSAY+L M
Sbjct:  756 RVRVANETRADLSLINSLELLPTTANADGERPRVPLSAIADVEVTAEISAIPRFNGRRMNEVQGFISAGVLPATVLEAFQQRLKEANFEMPPGYTYEFGGETEKRDDAIGNLMASVGVLLVLMIATLVLSFGSFRVAALVGMVGMLSVGLGLGALSVFGHPFGFMAIIGSMGLAGVAINDAIVVLAGLREDPDARRGDPIAVRNVVTHSTRHVVATSLTTMAGFAPLVIAGGGFWPPMAIAISGGVGGATILALYFIPSAYVLAM 1020          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A518D5G7_9BACT (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518D5G7_9BACT)

HSP 1 Score: 332 bits (851), Expect = 1.030e-102
Identity = 178/285 (62.46%), Postives = 223/285 (78.25%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGS 855
            R+RV +  R SL ++ASL L     TP G+   +PL+AIA V + SE AAI HF+ ERMNEV+AYI AGVLPA+VL+ F++RL Q+G+ELPPGYR E+GGE SKR+DA+GNL+++V VL VLM ATLVLSF SFR+A L+ +VG+LSIGLG+G L LFG+PFGFMAIVG+MGLAGVAIND+IVVLA LR +PRA  GD    RDVV+ +TRHV++T+ TTVAGF+PL+L GGGFWPPLA +I+GGV G TLLAL F+PSA+ L+MCR     A  +DP  +   S
Sbjct:  755 RVRVSNAHRSSLADVASLDLT----TPTGR---LPLSAIASVELRSETAAIPHFDTERMNEVKAYITAGVLPAQVLSAFRERLAQSGFELPPGYRFEYGGETSKRNDAIGNLLSSVSVLAVLMAATLVLSFGSFRLAALIASVGVLSIGLGVGSLALFGYPFGFMAIVGTMGLAGVAINDSIVVLAALREDPRARTGDPDAARDVVMHATRHVLSTTFTTVAGFLPLLLGGGGFWPPLATSISGGVLGGTLLALVFVPSAHTLLMCRGRARCAAEQDPACDNWSS 1032          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A517TGR5_9BACT (Nickel and cobalt resistance protein CnrA n=1 Tax=Planctomycetes bacterium MalM25 TaxID=2527998 RepID=A0A517TGR5_9BACT)

HSP 1 Score: 330 bits (847), Expect = 4.900e-102
Identity = 175/287 (60.98%), Postives = 219/287 (76.31%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGSTL 861
            R+RV  D R  +  IA + L+  +    G     PL A++ +R++ E +AI HFN ERMNEV+AYI AG LP++V   F+ RL ++G+ELPPGYRL++GGE SKR+DAVGNLM+NV VL+VLM ATLVLSF SFR+AGL+GAV  LSIGL +G L + G+PFGF AI+G+MGL GVAIND+IVVLA LR + RA  G    VRDVV+RS+RHV+AT+LTT+AGF+PL+L GGGFWPP+AITIAGGVGGATLLAL F PSAYIL+MCR C  +  V D  SE +  T+
Sbjct:  766 RVRVSGDSRADVSRIAGVDLVG-RSAATGAPTRTPLAALSSLRLTPERSAIPHFNAERMNEVKAYITAGALPSEVQGRFEARLAESGFELPPGYRLDFGGEGSKRNDAVGNLMSNVAVLLVLMAATLVLSFGSFRMAGLIGAVAGLSIGLSVGALAIAGYPFGFTAIIGAMGLVGVAINDSIVVLAALREDERARAGQPDAVRDVVVRSSRHVIATTLTTIAGFMPLILGGGGFWPPMAITIAGGVGGATLLALLFAPSAYILLMCRGCREKERVPDH-SEADEDTV 1050          
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Match: A0A517MR58_9BACT (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Adhaeretor mobilis TaxID=1930276 RepID=A0A517MR58_9BACT)

HSP 1 Score: 326 bits (836), Expect = 2.270e-100
Identity = 167/274 (60.95%), Postives = 216/274 (78.83%), Query Frame = 1
Query:    1 RIRVPHDRRGSLDNIASLQLIS--SKKTPDGQ---AQYVPLTAIADVRMSSEIAAISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGGEASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGLGLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRVVVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGATLLALYFIPSAYILVMCRNC 807
            R+R+ +  RG +  + SL L++  S+ +P+GQ   A  +PL+ IA + +  E++ + H N +RMNEV+AY+ A VLPA VLADFQ+RL+ + + LPPGYR E+GGEASKRDDA+GNL+++VGVL V+MVATLVLSF SFR+AG+VG V  LS+GL LG L LF FPFGFM IVG+MGL GVAIND IVVLA LR + +A  GD   VRDVVLR+TRHV++T+LTTVAGF+PL+++GGGFWPPLA TIAGGV GAT++AL F PS Y+L+MC+ C
Sbjct:  779 RVRMSNANRGRMSTVGSLDLLATPSQPSPNGQSGSAARIPLSTIATIDLKPEVSVVPHINTQRMNEVKAYLTAEVLPAGVLADFQQRLEASEFRLPPGYRYEYGGEASKRDDAIGNLLSSVGVLGVMMVATLVLSFGSFRMAGIVGTVAFLSVGLSLGALALFRFPFGFMGIVGTMGLIGVAINDTIVVLAALREDEQARTGDPAAVRDVVLRATRHVLSTTLTTVAGFLPLIISGGGFWPPLATTIAGGVSGATIMALLFAPSLYVLLMCKGC 1052          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73185.17365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001D14D6522.490e-19997.66efflux RND transporter permease subunit n=1 Tax=Gi... [more]
A0A518A7Y2_9PLAN4.790e-17490.30Cobalt-zinc-cadmium resistance protein CzcA n=8 Ta... [more]
A0A518IE15_9PLAN8.560e-17388.63Cobalt-zinc-cadmium resistance protein CzcA n=3 Ta... [more]
A0A350KFW2_9PLAN4.840e-16884.62Acriflavine resistance protein B (Fragment) n=2 Ta... [more]
A6CAC4_9PLAN5.440e-16385.28Uncharacterized protein n=13 Tax=Planctomycetaceae... [more]
A0A517WZW4_9PLAN1.860e-16183.50Cobalt-zinc-cadmium resistance protein CzcA n=2 Ta... [more]
A0A517ZMC5_9PLAN6.570e-11068.68Nickel and cobalt resistance protein CnrA n=3 Tax=... [more]
A0A518D5G7_9BACT1.030e-10262.46Cobalt-zinc-cadmium resistance protein CzcA n=1 Ta... [more]
A0A517TGR5_9BACT4.900e-10260.98Nickel and cobalt resistance protein CnrA n=1 Tax=... [more]
A0A517MR58_9BACT2.270e-10060.95Cobalt-zinc-cadmium resistance protein CzcA n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73185contigM-pyrifera_M_contig73185:3..902 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score485.7
Seed ortholog evalue1.5e-134
Seed eggNOG ortholog344747.PM8797T_27145
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EggNOG OGs2IYRV@203682,COG0841@1,COG0841@2
COG Functional cat.V
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size900
Cds size900
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816629.0399892-CDS-M-pyrifera_M_contig73185:2..9021622816629.0399892-CDS-M-pyrifera_M_contig73185:2..902Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73185 3..902 +
1692278086.6290011-CDS-M-pyrifera_M_contig73185:2..9021692278086.6290011-CDS-M-pyrifera_M_contig73185:2..902Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73185 3..902 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73185.17365.1prot_M-pyrifera_M_contig73185.17365.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73185 3..902 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73185.17365.1

>prot_M-pyrifera_M_contig73185.17365.1 ID=prot_M-pyrifera_M_contig73185.17365.1|Name=mRNA_M-pyrifera_M_contig73185.17365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=300bp
RIRVPHDRRGSLDNIASLQLISSKKTPDGQAQYVPLTAIADVRMSSEIAA
ISHFNGERMNEVQAYIKAGVLPAKVLADFQKRLQQAGYELPPGYRLEWGG
EASKRDDAVGNLMANVGVLMVLMVATLVLSFSSFRVAGLVGAVGILSIGL
GLGMLWLFGFPFGFMAIVGSMGLAGVAINDAIVVLAELRANPRASKGDRV
VVRDVVLRSTRHVVATSLTTVAGFIPLVLAGGGFWPPLAITIAGGVGGAT
LLALYFIPSAYILVMCRNCPLRAGVEDPVSEGEGSTLFSKLKDRLPALR*
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mRNA from alignment at M-pyrifera_M_contig73185:3..902+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73185.17365.1 ID=mRNA_M-pyrifera_M_contig73185.17365.1|Name=mRNA_M-pyrifera_M_contig73185.17365.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig73185:3..902+ (Macrocystis pyrifera P11B4 male)
CGAATTCGCGTACCTCACGACCGCCGGGGATCGCTTGATAATATTGCATC ACTGCAGCTGATCTCCAGTAAGAAGACCCCTGACGGCCAGGCACAGTATG TTCCTTTGACTGCGATTGCCGACGTCAGGATGTCGTCCGAGATCGCAGCG ATCTCCCATTTCAACGGGGAACGCATGAACGAGGTGCAAGCTTATATTAA AGCCGGTGTCCTACCCGCAAAGGTGCTGGCTGATTTTCAGAAACGACTGC AGCAGGCCGGTTATGAACTCCCGCCCGGCTATCGCCTGGAATGGGGTGGG GAGGCTTCCAAGCGGGATGATGCTGTCGGGAACCTGATGGCTAACGTCGG TGTGTTGATGGTGTTGATGGTTGCCACACTGGTGCTCTCGTTTTCCTCGT TTCGAGTCGCAGGACTGGTGGGCGCCGTGGGGATCCTCTCGATCGGTCTG GGGCTGGGTATGCTCTGGCTGTTCGGCTTCCCCTTCGGTTTTATGGCGAT CGTCGGCTCGATGGGGCTGGCAGGGGTCGCGATTAACGATGCCATCGTGG TGCTGGCGGAACTTCGCGCGAATCCACGGGCCAGCAAAGGGGATCGGGTT GTCGTCCGCGATGTCGTTCTGCGTTCCACGCGGCACGTTGTCGCGACCTC CCTGACGACGGTCGCCGGATTCATTCCCCTGGTGCTGGCGGGAGGCGGCT TCTGGCCTCCCCTGGCGATTACGATCGCAGGGGGCGTCGGTGGAGCGACC TTGCTGGCACTCTATTTTATCCCCTCGGCTTACATACTGGTGATGTGTCG CAACTGCCCCTTGCGGGCAGGTGTAGAGGATCCGGTTTCCGAAGGAGAGG GCTCCACACTCTTCTCGAAGCTCAAAGACCGCTTACCCGCTTTGCGATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73185:3..902+

>mRNA_M-pyrifera_M_contig73185.17365.1 ID=mRNA_M-pyrifera_M_contig73185.17365.1|Name=mRNA_M-pyrifera_M_contig73185.17365.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1800bp|location=Sequence derived from alignment at M-pyrifera_M_contig73185:3..902+ (Macrocystis pyrifera P11B4 male)
CGAATTCGCGTACCTCACGACCGCCGGGGATCGCTTGATAATATTGCATC
ACTGCAGCTGATCTCCAGTAAGAAGACCCCTGACGGCCAGGCACAGTATG
TTCCTTTGACTGCGATTGCCGACGTCAGGATGTCGTCCGAGATCGCAGCG
ATCTCCCATTTCAACGGGGAACGCATGAACGAGGTGCAAGCTTATATTAA
AGCCGGTGTCCTACCCGCAAAGGTGCTGGCTGATTTTCAGAAACGACTGC
AGCAGGCCGGTTATGAACTCCCGCCCGGCTATCGCCTGGAATGGGGTGGG
GAGGCTTCCAAGCGGGATGATGCTGTCGGGAACCTGATGGCTAACGTCGG
TGTGTTGATGGTGTTGATGGTTGCCACACTGGTGCTCTCGTTTTCCTCGT
TTCGAGTCGCAGGACTGGTGGGCGCCGTGGGGATCCTCTCGATCGGTCTG
GGGCTGGGTATGCTCTGGCTGTTCGGCTTCCCCTTCGGTTTTATGGCGAT
CGTCGGCTCGATGGGGCTGGCAGGGGTCGCGATTAACGATGCCATCGTGG
TGCTGGCGGAACTTCGCGCGAATCCACGGGCCAGCAAAGGGGATCGGGTT
GTCGTCCGCGATGTCGTTCTGCGTTCCACGCGGCACGTTGTCGCGACCTC
CCTGACGACGGTCGCCGGATTCATTCCCCTGGTGCTGGCGGGAGGCGGCT
TCTGGCCTCCCCTGGCGATTACGATCGCAGGGGGCGTCGGTGGAGCGACC
TTGCTGGCACTCTATTTTATCCCCTCGGCTTACATACTGGTGATGTGTCG
CAACTGCCCCTTGCGGGCAGGTGTAGAGGATCCGGTTTCCGAAGGAGAGG
GCTCCACACTCTTCTCGAAGCTCAAAGACCGCTTACCCGCTTTGCGATAA
CGAATTCGCGTACCTCACGACCGCCGGGGATCGCTTGATAATATTGCATC
ACTGCAGCTGATCTCCAGTAAGAAGACCCCTGACGGCCAGGCACAGTATG
TTCCTTTGACTGCGATTGCCGACGTCAGGATGTCGTCCGAGATCGCAGCG
ATCTCCCATTTCAACGGGGAACGCATGAACGAGGTGCAAGCTTATATTAA
AGCCGGTGTCCTACCCGCAAAGGTGCTGGCTGATTTTCAGAAACGACTGC
AGCAGGCCGGTTATGAACTCCCGCCCGGCTATCGCCTGGAATGGGGTGGG
GAGGCTTCCAAGCGGGATGATGCTGTCGGGAACCTGATGGCTAACGTCGG
TGTGTTGATGGTGTTGATGGTTGCCACACTGGTGCTCTCGTTTTCCTCGT
TTCGAGTCGCAGGACTGGTGGGCGCCGTGGGGATCCTCTCGATCGGTCTG
GGGCTGGGTATGCTCTGGCTGTTCGGCTTCCCCTTCGGTTTTATGGCGAT
CGTCGGCTCGATGGGGCTGGCAGGGGTCGCGATTAACGATGCCATCGTGG
TGCTGGCGGAACTTCGCGCGAATCCACGGGCCAGCAAAGGGGATCGGGTT
GTCGTCCGCGATGTCGTTCTGCGTTCCACGCGGCACGTTGTCGCGACCTC
CCTGACGACGGTCGCCGGATTCATTCCCCTGGTGCTGGCGGGAGGCGGCT
TCTGGCCTCCCCTGGCGATTACGATCGCAGGGGGCGTCGGTGGAGCGACC
TTGCTGGCACTCTATTTTATCCCCTCGGCTTACATACTGGTGATGTGTCG
CAACTGCCCCTTGCGGGCAGGTGTAGAGGATCCGGTTTCCGAAGGAGAGG
GCTCCACACTCTTCTCGAAGCTCAAAGACCGCTTACCCGCTTTGCGATAA
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