mRNA_M-pyrifera_M_contig73136.17358.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73136.17358.1
Unique NamemRNA_M-pyrifera_M_contig73136.17358.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: A0A0F7M8X7_9GAMM (Heavy metal efflux pump, cobalt-zinc-cadmium n=16 Tax=Proteobacteria TaxID=1224 RepID=A0A0F7M8X7_9GAMM)

HSP 1 Score: 649 bits (1673), Expect = 4.860e-224
Identity = 353/369 (95.66%), Postives = 363/369 (98.37%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGGEVKQFQVRIDPDALIRYDVSLP+I+ERIE NNANAGAQFIVKNDE+YIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDG+GEVVVGMVLKLIGSNTSQVIGAVK+ELATINANLPEG+EVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGG RPSLVVALSIPFSVGFTFLAMKFF+ISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPV SSLLMKRP+TDPDKPRKDIVS LLKGYQPLV+AMVARRWIAV LA+VVL IG
Sbjct:  175 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPDIKERIEANNANAGAQFIVKNDEQYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGEGEVVVGMVLKLIGSNTSQVIGAVKEELATINANLPEGIEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGFRPSLVVALSIPFSVGFTFLAMKFFDISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVASSLLMKRPETDPDKPRKDIVSLLLKGYQPLVEAMVARRWIAVTLAAVVLLIG 543
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: A0A2N1WEV9_9GAMM (CusA/CzcA family heavy metal efflux RND transporter (Fragment) n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-8 TaxID=2013804 RepID=A0A2N1WEV9_9GAMM)

HSP 1 Score: 600 bits (1548), Expect = 3.180e-212
Identity = 327/354 (92.37%), Postives = 343/354 (96.89%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFLLKGYQPLVQAMVAR 1062
            TEVLSIGGEVKQFQVRI P+AL+RYDVSLP+I+ERIE NNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGEL IGGEIRRGLT+KDG+GEVVVGMVLKLIGSNTSQVI AVK+ELATIN NLPEG++VQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPS+VVALSIPFSVGFTFLAMKFF+ISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQ+VARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSL FALIVAPV SSLLM+RP+ D DKP+KDIVS LLKGYQPLV+ MVAR
Sbjct:  175 TEVLSIGGEVKQFQVRIAPNALLRYDVSLPDIKERIEANNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELGIGGEIRRGLTTKDGEGEVVVGMVLKLIGSNTSQVIAAVKEELATINENLPEGIKVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSIVVALSIPFSVGFTFLAMKFFDISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQAVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLVFALIVAPVASSLLMRRPQEDADKPQKDIVSLLLKGYQPLVETMVAR 528
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: A0A1H1Y9S2_9GAMM (Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Halopseudomonas litoralis TaxID=797277 RepID=A0A1H1Y9S2_9GAMM)

HSP 1 Score: 603 bits (1554), Expect = 4.260e-210
Identity = 323/369 (87.53%), Postives = 349/369 (94.58%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGGEVKQFQV +DP+AL+RYDVSLP I+ERIE NNANAGAQFIVKNDEEYIVRSVGLATDLE+LRNIVVKTIDGTPVYL+QLG+LDIGGEIRRGLT+K+G GEVVVGMVLKLIGSNTS VI AVKQELATIN NLPEG+EVQPYYDQATLVKAAV+TVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMK F ISANLMSLGG+AIAIGMMVDGAVVVVEN+DRMLRE+ PDESRLH+V RACQSVARPILFAISIII+VFLPLFTLQGVEGATF+PLAYTVAVAM GSL FAL++APV +SLLM+ PK   DKPRKDI+SFLLKGY+PLV+AMVARRWIA+ALA VVL +G
Sbjct:  175 TEVLSIGGEVKQFQVNVDPNALLRYDVSLPEIKERIEANNANAGAQFIVKNDEEYIVRSVGLATDLESLRNIVVKTIDGTPVYLNQLGDLDIGGEIRRGLTTKNGNGEVVVGMVLKLIGSNTSNVINAVKQELATINDNLPEGIEVQPYYDQATLVKAAVTTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKIFGISANLMSLGGLAIAIGMMVDGAVVVVENVDRMLREAKPDESRLHIVMRACQSVARPILFAISIIIVVFLPLFTLQGVEGATFKPLAYTVAVAMFGSLIFALVIAPVAASLLMRSPKVREDKPRKDIISFLLKGYKPLVEAMVARRWIALALAVVVLAVG 543
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: A0A1H1MPZ8_9GAMM (Cobalt-zinc-cadmium resistance protein CzcA n=8 Tax=root TaxID=1 RepID=A0A1H1MPZ8_9GAMM)

HSP 1 Score: 603 bits (1554), Expect = 4.030e-206
Identity = 323/369 (87.53%), Postives = 349/369 (94.58%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGGEVKQFQV +DP+AL+RYDVSLP I+ERIE NNANAGAQFIVKNDEEYIVRSVGLATDLE+LRNIVVKTIDGTPVYL+QLG+LDIGGEIRRGLT+K+G GEVVVGMVLKLIGSNTS VI AVKQELATIN NLPEG+EVQPYYDQATLVKAAV+TVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMK F ISANLMSLGG+AIAIGMMVDGAVVVVEN+DRMLRE+ PDESRLH+V RACQSVARPILFAISIII+VFLPLFTLQGVEGATF+PLAYTVAVAM GSL FAL++APV +SLLM+ PK   DKPRKDI+SFLLKGY+PLV+AMVARRWIA+ALA VVL +G
Sbjct:  175 TEVLSIGGEVKQFQVNVDPNALLRYDVSLPEIKERIEANNANAGAQFIVKNDEEYIVRSVGLATDLESLRNIVVKTIDGTPVYLNQLGDLDIGGEIRRGLTTKNGNGEVVVGMVLKLIGSNTSNVINAVKQELATINDNLPEGIEVQPYYDQATLVKAAVTTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKIFGISANLMSLGGLAIAIGMMVDGAVVVVENVDRMLREAKPDESRLHIVMRACQSVARPILFAISIIIVVFLPLFTLQGVEGATFKPLAYTVAVAMFGSLIFALVIAPVAASLLMRSPKVREDKPRKDIISFLLKGYKPLVEAMVARRWIALALAVVVLAVG 543
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: A0A3N1P2V7_9GAMM (Cobalt-zinc-cadmium resistance protein CzcA n=3 Tax=Cellvibrionaceae TaxID=1706371 RepID=A0A3N1P2V7_9GAMM)

HSP 1 Score: 528 bits (1359), Expect = 7.620e-177
Identity = 283/371 (76.28%), Postives = 331/371 (89.22%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDP--DKPRKDIVSFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGG VKQFQVRIDP AL++YD+SLP I+ RIE NNANAGAQFI++NDE++IVRSVGLA DL+ LRNIVVK++DG PVYLHQLGEL IGGEIRRGLT+KDG+GE VVGMVLKLIG+NTS VIGAVK+ELATINANLPEG+EV PYYDQA LV+AAVSTV NALLQGI LVA+VLLAFMGG RPSLVVALSIPFSV    +AMK+F ISANLMSLGG+AIAIGMMVDGAVVVVENIDR+LRESS  ESRLH+VARA Q+VARPILFAISIII+VFLPLF+LQGVEGATFRPLAYTV++AM+GSL FAL+VAPV++SL+M+RPK++   D+P   ++  + +GY+PL+Q ++ RRWI V +A +VL +G
Sbjct:  175 TEVLSIGGNVKQFQVRIDPQALLQYDISLPQIKRRIEANNANAGAQFIIQNDEQFIVRSVGLAKDLDDLRNIVVKSVDGIPVYLHQLGELAIGGEIRRGLTTKDGEGEAVVGMVLKLIGANTSNVIGAVKEELATINANLPEGIEVSPYYDQAQLVQAAVSTVTNALLQGIALVAIVLLAFMGGWRPSLVVALSIPFSVCLALIAMKWFGISANLMSLGGLAIAIGMMVDGAVVVVENIDRLLRESSAGESRLHIVARASQAVARPILFAISIIIVVFLPLFSLQGVEGATFRPLAYTVSLAMVGSLIFALVVAPVVASLIMRRPKSEQASDEPG-GLIGLVARGYRPLLQGVIRRRWIGVTIAGLVLAVG 544
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: UPI0004217E04 (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Marinimicrobium agarilyticum TaxID=306546 RepID=UPI0004217E04)

HSP 1 Score: 518 bits (1334), Expect = 3.880e-173
Identity = 283/371 (76.28%), Postives = 324/371 (87.33%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPK--TDPDKPRKDIVSFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGG VKQFQVRIDP AL+RYDVSLP I+ RIE NNANAGAQFIV+NDE+YIVRSVGLA +L+ LR IVVK+IDG PVYLHQLGEL IGGEIRRGL +KD +GE VVGMVLKLIG+NTS VI AVK+ELA+INANLPEG+ V PYYDQA LV+AAVSTV NALLQGI+LVALVL+AFMGG RPSLVVALSIPFSV    + MK+F ISANLMSLGG+AIAIGMMVDGAVVVVENIDR L  +SP+ESRLH+VARA Q+VARPILFAISIII+VFLPLF+LQGVEGATFRPLAYTV++AMLGSL FAL+VAPV +SLLM+RPK  ++ D+P K ++ +L +GYQPLVQ  V  RW+A+  A +VL +G
Sbjct:  175 TEVLSIGGHVKQFQVRIDPQALLRYDVSLPQIKARIEANNANAGAQFIVQNDEQYIVRSVGLAKNLDDLRQIVVKSIDGVPVYLHQLGELTIGGEIRRGLVTKDAEGEAVVGMVLKLIGANTSNVISAVKKELASINANLPEGMTVTPYYDQAQLVEAAVSTVTNALLQGIVLVALVLIAFMGGWRPSLVVALSIPFSVCLALIGMKWFGISANLMSLGGLAIAIGMMVDGAVVVVENIDRSLHHASPEESRLHIVARASQAVARPILFAISIIIVVFLPLFSLQGVEGATFRPLAYTVSLAMLGSLIFALVVAPVAASLLMRRPKVASEEDEP-KGLIGYLARGYQPLVQRFVNHRWLALGCAGLVLAVG 544
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: B5JWM9_9GAMM (Cation efflux system protein CzcA n=1 Tax=gamma proteobacterium HTCC5015 TaxID=391615 RepID=B5JWM9_9GAMM)

HSP 1 Score: 495 bits (1275), Expect = 2.080e-164
Identity = 271/369 (73.44%), Postives = 315/369 (85.37%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLS+GGEVKQFQV +DP AL+RY +SLP I+ RIE NNANAGAQFIVKNDE+YIVRSVGLA+D++ L+NIVVKT++GTPVYLHQL EL IGG+IRRGL   DG+GE VVGMVLKLIGSNTS VI  V +EL TIN NLP+G+ VQPYYDQATLVKAAVSTV +AL+QGI LV +VL  FMG +RPS+VVALSIPFSV FTFLAM++F+ISANLMSLGGIAIAIGMMVDGAVVVVE+I+R LRESS +ESR  ++ RAC SVARPILFAISIII+VFLPLFTLQGVEGATFRPLAYTVA AMLGSLFFAL+VAP  +  L+KRPK D ++  K   S LL  YQP+V A++ RR +AVA++  +L +G
Sbjct:  175 TEVLSVGGEVKQFQVNVDPHALLRYKISLPEIKARIEANNANAGAQFIVKNDEQYIVRSVGLASDIKDLKNIVVKTVNGTPVYLHQLAELTIGGKIRRGLALADGRGEAVVGMVLKLIGSNTSAVIEEVVKELETINDNLPDGMSVQPYYDQATLVKAAVSTVTSALVQGIALVTIVLFVFMGSIRPSVVVALSIPFSVAFTFLAMRYFDISANLMSLGGIAIAIGMMVDGAVVVVESIERSLRESSSEESRTAIIVRACHSVARPILFAISIIILVFLPLFTLQGVEGATFRPLAYTVATAMLGSLFFALVVAPACAYYLLKRPKRDDERASK---SKLLAIYQPMVTALIRRRGLAVAISLGLLVLG 540
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: UPI00067394FB (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Gilvimarinus polysaccharolyticus TaxID=863921 RepID=UPI00067394FB)

HSP 1 Score: 451 bits (1159), Expect = 4.840e-147
Identity = 256/373 (68.63%), Postives = 306/373 (82.04%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFL----LKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGGEVKQFQV++DP AL+RYD+SLP ++ RIE NNANAGAQF+VKNDE+Y++RSVGLA +L+ + NIVVKTIDGTPVYL QLGEL IGGEIRRGLT+K+GKGEVVVGMVLKL+GSNT++VI AVK ELA IN NLPEGV V PYYDQA LV AA++TV NAL+QG++LV LVL+AFM G+R SLVVALSIPFSV    +AM +  ISANLMSLGG+AIAIG+MVDGAVVVVE ID+ L++++  ES   LV  AC +VARPILFAISIIIIVFLPLF+LQGVEGATF+PLAYT+A+AM GSL +AL+VAPV + L MK+PK     PR    S L      GY+ +V  +V RR +AV +A +VL +G
Sbjct:  175 TEVLSIGGEVKQFQVQLDPLALVRYDISLPEVKARIEANNANAGAQFLVKNDEQYLIRSVGLARNLDDIGNIVVKTIDGTPVYLEQLGELVIGGEIRRGLTTKNGKGEVVVGMVLKLLGSNTAEVIDAVKTELAAINTNLPEGVSVAPYYDQAQLVHAALTTVTNALIQGVVLVVLVLIAFMRGVRASLVVALSIPFSVAVALIAMPWLGISANLMSLGGLAIAIGLMVDGAVVVVEQIDQELKKAT-GESHRQLVLNACGTVARPILFAISIIIIVFLPLFSLQGVEGATFKPLAYTLALAMAGSLLYALLVAPVAAFLWMKKPK-----PRAAASSQLPGRMRSGYERVVGFVVQRRPLAVGIALLVLALG 541
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: UPI00059FF8E7 (CusA/CzcA family heavy metal efflux RND transporter n=1 Tax=Gilvimarinus agarilyticus TaxID=679259 RepID=UPI00059FF8E7)

HSP 1 Score: 449 bits (1154), Expect = 2.440e-146
Identity = 250/369 (67.75%), Postives = 303/369 (82.11%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGGEVKQFQV++DP AL+R+DVSLP ++ RIE NNANAGAQF+VKNDE+YI+RSVGLA  L  L  IVVKTIDGTPVYL QLGEL IGGEIRRGL  KDGKGEVVVGMVLKL+GSNT+ VI +VK EL++INANLPEGV V PYYDQA LV+AA++TV +AL+QG++LV LVL+ FM G+RPSLVVALSIPFSV    +AM +  ISANLMSLGG+AIAIG+MVDGAVVVVE +D+ L+  + ++SR  ++  AC+ VARPILFAISIIIIVFLPLF+LQGVEGATF+PLAYT+A+AM GSL +AL+VAPV +   M++P T   +P     S L  GY+ LV  +V RR +AVA+A ++L +G
Sbjct:  175 TEVLSIGGEVKQFQVQLDPFALVRFDVSLPEVKARIEANNANAGAQFLVKNDEQYIIRSVGLAGSLNDLGKIVVKTIDGTPVYLEQLGELVIGGEIRRGLAIKDGKGEVVVGMVLKLLGSNTAAVIDSVKAELSSINANLPEGVSVAPYYDQAQLVRAALTTVTSALIQGVVLVLLVLVVFMRGIRPSLVVALSIPFSVAVALMAMPWLGISANLMSLGGLAIAIGLMVDGAVVVVEQVDQQLKNDA-NQSRKKIILDACEMVARPILFAISIIIIVFLPLFSLQGVEGATFKPLAYTLALAMAGSLIYALLVAPVAAYFFMQKP-TPEAQPANSKNSRLRHGYESLVSFVVQRRPLAVAIAVLMLVLG 541
[Close]
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Match: B5JDY8_9BACT (Heavy metal efflux pump, CzcA family n=1 Tax=Verrucomicrobiae bacterium DG1235 TaxID=382464 RepID=B5JDY8_9BACT)

HSP 1 Score: 447 bits (1151), Expect = 8.000e-146
Identity = 249/373 (66.76%), Postives = 299/373 (80.16%), Query Frame = 1 
Query:    1 TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVKNDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGLTSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYYDQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVGFTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDESRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVAVAMLGSLFFALIVAPVISSLLMKRPKT---DPDKPRKDIV-SFLLKGYQPLVQAMVARRWIAVALASVVLFIG 1107
            TEVLSIGGEVKQFQVRI P  L+RYD+SL  ++E IE+NN+N GAQFIVKNDEEYIVRSVGLAT ++ L  IVVKT+DG PVYL  L ++ IGGEIRRGL + +G+GE VVGMVLKLIG+NT++VI AVK E+  I   LPEGV + PYYDQATLVKA VSTV NAL+QGI LV LVLL FMGG+R S+VVALSIPFS+ F F+ MK + +SANLMSLGG+AIAIGMMVDG +V+VEN+DR LRE   + SR+ ++A AC  V RPI+FAISIIIIVFLPLFTLQGVEG TFRPLAY VA+AMLGSL FAL++APV+S LLM+ PK    D +KP++ IV   LL  Y+P+++  V  R +AVAL+  +L IG
Sbjct:  175 TEVLSIGGEVKQFQVRIRPMDLLRYDLSLHQVKEIIENNNSNTGAQFIVKNDEEYIVRSVGLATKIDDLEKIVVKTVDGAPVYLEDLADVVIGGEIRRGLVTMNGEGEAVVGMVLKLIGTNTNEVIAAVKSEMEAIQKVLPEGVTINPYYDQATLVKAVVSTVTNALIQGIGLVLLVLLLFMGGIRGSIVVALSIPFSILFAFILMKQYGVSANLMSLGGLAIAIGMMVDGTIVIVENVDRHLRERGSEASRIRIIADACTEVGRPIVFAISIIIIVFLPLFTLQGVEGTTFRPLAYAVALAMLGSLIFALLIAPVVSYLLMRSPKKALKDGEKPKEHIVVRVLLVPYKPVIRFFVRFRAVAVALSLALLAIG 547
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73136.17358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0F7M8X7_9GAMM4.860e-22495.66Heavy metal efflux pump, cobalt-zinc-cadmium n=16 ... [more]
A0A2N1WEV9_9GAMM3.180e-21292.37CusA/CzcA family heavy metal efflux RND transporte... [more]
A0A1H1Y9S2_9GAMM4.260e-21087.53Cobalt-zinc-cadmium resistance protein CzcA n=1 Ta... [more]
A0A1H1MPZ8_9GAMM4.030e-20687.53Cobalt-zinc-cadmium resistance protein CzcA n=8 Ta... [more]
A0A3N1P2V7_9GAMM7.620e-17776.28Cobalt-zinc-cadmium resistance protein CzcA n=3 Ta... [more]
UPI0004217E043.880e-17376.28CusA/CzcA family heavy metal efflux RND transporte... [more]
B5JWM9_9GAMM2.080e-16473.44Cation efflux system protein CzcA n=1 Tax=gamma pr... [more]
UPI00067394FB4.840e-14768.63CusA/CzcA family heavy metal efflux RND transporte... [more]
UPI00059FF8E72.440e-14667.75CusA/CzcA family heavy metal efflux RND transporte... [more]
B5JDY8_9BACT8.000e-14666.76Heavy metal efflux pump, CzcA family n=1 Tax=Verru... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73136contigM-pyrifera_M_contig73136:3..1109 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score651.4
Seed ortholog evalue2.6e-184
Seed eggNOG ortholog1121937.AUHJ01000002_gene3369
KEGG koko:K15726
KEGG TC2.A.6.1.2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EggNOG OGs1NUIV@1224,1SP6I@1236,46516@72275,COG3696@1,COG3696@2
COG Functional cat.P
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size1107
Cds size1107
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816628.574867-CDS-M-pyrifera_M_contig73136:2..11091622816628.574867-CDS-M-pyrifera_M_contig73136:2..1109Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73136 3..1109 +
1692278086.3054075-CDS-M-pyrifera_M_contig73136:2..11091692278086.3054075-CDS-M-pyrifera_M_contig73136:2..1109Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73136 3..1109 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73136.17358.1prot_M-pyrifera_M_contig73136.17358.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73136 3..1109 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73136.17358.1

>prot_M-pyrifera_M_contig73136.17358.1 ID=prot_M-pyrifera_M_contig73136.17358.1|Name=mRNA_M-pyrifera_M_contig73136.17358.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=369bp
TEVLSIGGEVKQFQVRIDPDALIRYDVSLPNIRERIEDNNANAGAQFIVK
NDEEYIVRSVGLATDLEALRNIVVKTIDGTPVYLHQLGELDIGGEIRRGL
TSKDGKGEVVVGMVLKLIGSNTSQVIGAVKQELATINANLPEGVEVQPYY
DQATLVKAAVSTVINALLQGIILVALVLLAFMGGLRPSLVVALSIPFSVG
FTFLAMKFFNISANLMSLGGIAIAIGMMVDGAVVVVENIDRMLRESSPDE
SRLHLVARACQSVARPILFAISIIIIVFLPLFTLQGVEGATFRPLAYTVA
VAMLGSLFFALIVAPVISSLLMKRPKTDPDKPRKDIVSFLLKGYQPLVQA
MVARRWIAVALASVVLFIG
back to top

mRNA from alignment at M-pyrifera_M_contig73136:3..1109+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73136.17358.1 ID=mRNA_M-pyrifera_M_contig73136.17358.1|Name=mRNA_M-pyrifera_M_contig73136.17358.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1107bp|location=Sequence derived from alignment at M-pyrifera_M_contig73136:3..1109+ (Macrocystis pyrifera P11B4 male)
ACGGAAGTTCTTTCCATCGGCGGTGAGGTCAAGCAGTTCCAGGTTCGTAT
CGACCCCGACGCGCTGATCCGCTACGACGTGTCACTGCCCAACATAAGGG
AGCGCATCGAGGACAACAATGCCAACGCTGGAGCGCAGTTTATTGTCAAA
AATGATGAGGAATACATCGTACGCTCCGTGGGTCTGGCCACGGATCTTGA
AGCCCTGCGTAACATCGTGGTGAAAACCATCGACGGCACACCCGTTTACC
TCCATCAACTGGGAGAGTTAGACATTGGCGGCGAAATCCGCCGTGGGCTC
ACCTCAAAGGACGGCAAAGGCGAAGTGGTCGTGGGCATGGTATTGAAGCT
CATTGGCAGCAATACCTCCCAGGTGATCGGCGCCGTTAAGCAGGAGCTGG
CCACCATCAACGCCAACCTGCCGGAAGGCGTCGAGGTGCAGCCCTATTAC
GACCAGGCGACATTGGTCAAAGCAGCGGTGAGCACGGTGATCAACGCCCT
GTTGCAGGGGATTATCTTGGTGGCCTTGGTGCTACTGGCCTTTATGGGCG
GCCTGCGGCCCAGCCTGGTGGTGGCGCTGTCGATTCCCTTTTCCGTCGGC
TTCACCTTTCTCGCCATGAAATTCTTCAACATCTCGGCCAACCTGATGTC
GCTCGGCGGGATCGCTATTGCCATCGGCATGATGGTGGACGGTGCGGTGG
TCGTGGTGGAGAATATCGACCGGATGTTGCGGGAATCCTCCCCGGACGAA
TCACGCTTGCACCTTGTGGCGCGGGCCTGTCAGTCGGTGGCACGCCCGAT
TCTGTTTGCCATCAGCATTATCATTATTGTGTTTTTGCCGCTTTTCACTT
TGCAGGGCGTGGAAGGGGCGACCTTTAGACCACTTGCGTATACGGTGGCG
GTGGCCATGCTTGGCTCCCTCTTTTTTGCCCTGATCGTAGCACCAGTGAT
CTCATCCTTGCTGATGAAGCGCCCCAAGACAGACCCTGACAAGCCTCGTA
AGGACATTGTCAGTTTTCTGCTGAAAGGCTACCAACCCCTCGTGCAGGCA
ATGGTGGCGCGTCGTTGGATTGCCGTGGCCCTGGCGTCTGTGGTGTTGTT
CATCGGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig73136:3..1109+

>mRNA_M-pyrifera_M_contig73136.17358.1 ID=mRNA_M-pyrifera_M_contig73136.17358.1|Name=mRNA_M-pyrifera_M_contig73136.17358.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2214bp|location=Sequence derived from alignment at M-pyrifera_M_contig73136:3..1109+ (Macrocystis pyrifera P11B4 male)
ACGGAAGTTCTTTCCATCGGCGGTGAGGTCAAGCAGTTCCAGGTTCGTAT
CGACCCCGACGCGCTGATCCGCTACGACGTGTCACTGCCCAACATAAGGG
AGCGCATCGAGGACAACAATGCCAACGCTGGAGCGCAGTTTATTGTCAAA
AATGATGAGGAATACATCGTACGCTCCGTGGGTCTGGCCACGGATCTTGA
AGCCCTGCGTAACATCGTGGTGAAAACCATCGACGGCACACCCGTTTACC
TCCATCAACTGGGAGAGTTAGACATTGGCGGCGAAATCCGCCGTGGGCTC
ACCTCAAAGGACGGCAAAGGCGAAGTGGTCGTGGGCATGGTATTGAAGCT
CATTGGCAGCAATACCTCCCAGGTGATCGGCGCCGTTAAGCAGGAGCTGG
CCACCATCAACGCCAACCTGCCGGAAGGCGTCGAGGTGCAGCCCTATTAC
GACCAGGCGACATTGGTCAAAGCAGCGGTGAGCACGGTGATCAACGCCCT
GTTGCAGGGGATTATCTTGGTGGCCTTGGTGCTACTGGCCTTTATGGGCG
GCCTGCGGCCCAGCCTGGTGGTGGCGCTGTCGATTCCCTTTTCCGTCGGC
TTCACCTTTCTCGCCATGAAATTCTTCAACATCTCGGCCAACCTGATGTC
GCTCGGCGGGATCGCTATTGCCATCGGCATGATGGTGGACGGTGCGGTGG
TCGTGGTGGAGAATATCGACCGGATGTTGCGGGAATCCTCCCCGGACGAA
TCACGCTTGCACCTTGTGGCGCGGGCCTGTCAGTCGGTGGCACGCCCGAT
TCTGTTTGCCATCAGCATTATCATTATTGTGTTTTTGCCGCTTTTCACTT
TGCAGGGCGTGGAAGGGGCGACCTTTAGACCACTTGCGTATACGGTGGCG
GTGGCCATGCTTGGCTCCCTCTTTTTTGCCCTGATCGTAGCACCAGTGAT
CTCATCCTTGCTGATGAAGCGCCCCAAGACAGACCCTGACAAGCCTCGTA
AGGACATTGTCAGTTTTCTGCTGAAAGGCTACCAACCCCTCGTGCAGGCA
ATGGTGGCGCGTCGTTGGATTGCCGTGGCCCTGGCGTCTGTGGTGTTGTT
CATCGGCACGGAAGTTCTTTCCATCGGCGGTGAGGTCAAGCAGTTCCAGG
TTCGTATCGACCCCGACGCGCTGATCCGCTACGACGTGTCACTGCCCAAC
ATAAGGGAGCGCATCGAGGACAACAATGCCAACGCTGGAGCGCAGTTTAT
TGTCAAAAATGATGAGGAATACATCGTACGCTCCGTGGGTCTGGCCACGG
ATCTTGAAGCCCTGCGTAACATCGTGGTGAAAACCATCGACGGCACACCC
GTTTACCTCCATCAACTGGGAGAGTTAGACATTGGCGGCGAAATCCGCCG
TGGGCTCACCTCAAAGGACGGCAAAGGCGAAGTGGTCGTGGGCATGGTAT
TGAAGCTCATTGGCAGCAATACCTCCCAGGTGATCGGCGCCGTTAAGCAG
GAGCTGGCCACCATCAACGCCAACCTGCCGGAAGGCGTCGAGGTGCAGCC
CTATTACGACCAGGCGACATTGGTCAAAGCAGCGGTGAGCACGGTGATCA
ACGCCCTGTTGCAGGGGATTATCTTGGTGGCCTTGGTGCTACTGGCCTTT
ATGGGCGGCCTGCGGCCCAGCCTGGTGGTGGCGCTGTCGATTCCCTTTTC
CGTCGGCTTCACCTTTCTCGCCATGAAATTCTTCAACATCTCGGCCAACC
TGATGTCGCTCGGCGGGATCGCTATTGCCATCGGCATGATGGTGGACGGT
GCGGTGGTCGTGGTGGAGAATATCGACCGGATGTTGCGGGAATCCTCCCC
GGACGAATCACGCTTGCACCTTGTGGCGCGGGCCTGTCAGTCGGTGGCAC
GCCCGATTCTGTTTGCCATCAGCATTATCATTATTGTGTTTTTGCCGCTT
TTCACTTTGCAGGGCGTGGAAGGGGCGACCTTTAGACCACTTGCGTATAC
GGTGGCGGTGGCCATGCTTGGCTCCCTCTTTTTTGCCCTGATCGTAGCAC
CAGTGATCTCATCCTTGCTGATGAAGCGCCCCAAGACAGACCCTGACAAG
CCTCGTAAGGACATTGTCAGTTTTCTGCTGAAAGGCTACCAACCCCTCGT
GCAGGCAATGGTGGCGCGTCGTTGGATTGCCGTGGCCCTGGCGTCTGTGG
TGTTGTTCATCGGC
back to top