prot_M-pyrifera_M_contig72794.17291.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig72794.17291.1
Unique Nameprot_M-pyrifera_M_contig72794.17291.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length269
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72794.17291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018476Glycerophosphoryl diester phosphodiesterase, membrane domainPFAMPF10110GPDPase_membcoord: 116..258
e-value: 2.5E-7
score: 29.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..269
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..176
NoneNo IPR availableTMHMMTMhelixcoord: 239..261
NoneNo IPR availableTMHMMTMhelixcoord: 207..229
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72794contigM-pyrifera_M_contig72794:13..819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72794.17291.1mRNA_M-pyrifera_M_contig72794.17291.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig72794 13..819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig72794.17291.1 ID=prot_M-pyrifera_M_contig72794.17291.1|Name=mRNA_M-pyrifera_M_contig72794.17291.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
MFLTNKTQPFGALLGDCFRSFRPLLWKTLPIFVAGFILYGLYLLLAKITY
GNALFTATKETGSVSISGWSVFLFIVPILVAKIYFLTTIFRRADGVLSND
VSKIKSAWSAGWRRFFPLIGIGIICALIISPIVVVGGFLTAGILMLSKWV
GALLGIAINVGIFCIAVRFYYAIPLITRRGHGVFQSFRESWRLTRGYVWR
LIGMNSVVFVAPCLLFTGISFLLAFILPAGTILTVLSTIVGVVQFIMMPI
LSIGAAYVFLNNSMLFHNE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018476GlyceroP-diester-Pdiesterase_M