mRNA_M-pyrifera_M_contig72639.17259.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72639.17259.1
Unique NamemRNA_M-pyrifera_M_contig72639.17259.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: W4G9K8_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9K8_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.280e-39
Identity = 103/276 (37.32%), Postives = 152/276 (55.07%), Query Frame = 1
Query:    1 ISALLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPVWRAVVAHERWKALSVLLGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEG-GAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFAS-PTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++ L+SL H  + L VHG   F   + KF+H++ + P    + + E    L+++  Q+    T    PKL++L  ++ EH  R +  G  +R IVFT  R SVTEIV+ L S +        LI   +F+GQ   +G   KG  Q+QQ Q +   RDG+ N LV+T IAEEGLD+G V L+V +D + SP RM+QR+GRTGR  VG VV LV++G E  + + S S  + + ++L   + KF   P+  M+    +P L    +    F AS I G
Sbjct:  906 LALLISLLHGKDILNVHGIGNFKTFLDKFSHESFSGPKKMVLESPEFAHLLALVQTQVGGGRTASNNPKLMQLQVVLSEHFTRHERGGSSTRSIVFTQYRESVTEIVALLSSMAP-------LIKVQQFIGQGTAKGKDGKGQTQKQQQQVVAKFRDGEFNVLVATCIAEEGLDIGEVDLIVSFDCLTSPVRMIQRMGRTGRKRVGRVVLLVTEGDEEKKLERSVSAAKSVNRSLTIFKDKFKCVPSARMIPTGIVPQLTESAMVVPTFQASLIGG 1174          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: A0A3R7Y455_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y455_9STRA)

HSP 1 Score: 155 bits (391), Expect = 5.440e-39
Identity = 102/273 (37.36%), Postives = 150/273 (54.95%), Query Frame = 1
Query:   10 LLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPVWRAVVAHERWKALSVLLGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEG-GAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFAS-PTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++SL H  + L VHG   F   + KF+H++ + P    + + E    L+++  Q+    T    PKL++L  ++ EH  R +  G  +R IVFT  R SVTEIV+ L S +        LI   +F+GQ   +G   KG  Q+QQ Q +   RDG+ N LV+T IAEEGLD+G V L+V +D + SP RM+QR+GRTGR  VG VV LV++G E  + + S S  + + ++L   + KF   P+  M+    +P L    +    F AS I G
Sbjct:  262 VISLLHGKDILNVHGIGNFKTFLDKFSHESFSGPKKMVLESPEFAHLLALVQTQVGGGRTASNNPKLMQLQVVLSEHFTRHERGGSSTRSIVFTQYRESVTEIVALLSSMAP-------LIKVQQFIGQGTAKGKDGKGQTQKQQQQVVAKFRDGEFNVLVATCIAEEGLDIGEVDLIVSFDCLTSPVRMIQRMGRTGRKRVGRVVLLVTEGDEEKKLERSVSAAKSVNRSLTIFKDKFKCVPSARMIPTGIVPQLTESAMVVPTFQASLIGG 527          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: A0A397FKJ0_9STRA (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FKJ0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 8.620e-39
Identity = 92/239 (38.49%), Postives = 136/239 (56.90%), Query Frame = 1
Query:   10 LLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPVWRAVVAHERWKALSVLLGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEG-GAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKF 723
            ++SL H  + L VHG   F   + KF+H++ + P    + + E    L+++  Q+    T    PKL++L  ++ EH  R +  G  +R IVFT  R SV EIV+ L S +        LI   +F+GQ   +G   KG  Q+QQ Q +   RDG+ N LV+T IAEEGLD+G V L+V +D + SP RM+QR+GRTGR  VG VV LV++G E  + + S S  + + ++L   + KF
Sbjct:   56 VISLLHGKDILNVHGIGNFKTFLDKFSHESFSGPKKMVLESPEFAHLLALVQAQVGGGRTASNNPKLMQLQVVLSEHFTRHERGGSSTRSIVFTQYRESVMEIVALLSSMAP-------LIKVQQFIGQGTAKGKDGKGQTQKQQQQVVAKFRDGEFNVLVATCIAEEGLDIGEVDLIVSFDCLTSPVRMIQRMGRTGRKRVGRVVLLVTEGDEEKKLERSVSAAKSVNRSLTIFKDKF 287          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: A0A418BWH5_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BWH5_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.940e-38
Identity = 101/273 (37.00%), Postives = 149/273 (54.58%), Query Frame = 1
Query:   10 LLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPVWRAVVAHERWKALSVLLGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEG-GAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFAS-PTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++SL H  + L VHG   F   + KF+H++ + P    + + E    L+++  Q+    T    PKL++L  ++ EH  R +  G  +R IVFT  R SV EIV+ L S +        LI   +F+GQ   +G   KG  Q+QQ Q +   RDG+ N LV+T IAEEGLD+G V L+V +D + SP RM+QR+GRTGR  VG VV LV++G E  + + S S  + + ++L   + KF   P+  M+    +P L    +    F AS I G
Sbjct:  241 VISLLHGKDILNVHGIGNFKTFLDKFSHESFSGPKKMVLESPEFAHLLALVQAQVGGGRTASNNPKLMQLQVVLSEHFTRHERGGSSTRSIVFTQYRESVMEIVALLSSMAP-------LIKVQQFIGQGTAKGKDGKGQTQKQQQQVVAKFRDGEFNVLVATCIAEEGLDIGEVDLIVSFDCLTSPVRMIQRMGRTGRKRVGRVVLLVTEGDEEKKLERSVSAAKSVNRSLTIFKDKFKCVPSARMIPTGIVPQLTESTMVVPTFQASLIGG 506          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: A0A397CL87_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CL87_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.350e-38
Identity = 101/273 (37.00%), Postives = 150/273 (54.95%), Query Frame = 1
Query:   10 LLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPVWRAVVAHERWKALSVLLGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEG-GAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFAS-PTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++SL H  + L VHG   F   + KF+H++ + P    + + E    L+++  Q+    T    PKL++L  ++ EH  R +  G  +R IVFT  R SVTEIV+ L S +        LI   +F+GQ   +G   KG  Q+QQ Q +   R+G+ N LV+T IAEEGLD+G V L+V +D + SP RM+QR+GRTGR  VG VV LV++G E  + + S S  + + ++L   + KF   P+  M+    +P L    +    F AS I G
Sbjct:   24 VISLLHGKDILNVHGIGNFKTFLDKFSHESFSGPKKMVLESPEFAHLLALVQAQVGGGRTASNNPKLMQLQVVLSEHFTRHERGGSSTRSIVFTQYRESVTEIVALLSSMAP-------LIKVQQFIGQGTAKGKDGKGQTQKQQQQVVAKFREGEFNVLVATCIAEEGLDIGEVDLIVSFDCLTSPVRMIQRMGRTGRKRVGRVVLLVTEGDEEKKLERSVSAAKSVNRSLTIFKDKFKCVPSARMIPTGIVPQLTESAMIVPMFQASLIGG 289          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: A0A8K1CNQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNQ3_PYTOL)

HSP 1 Score: 152 bits (385), Expect = 3.640e-38
Identity = 105/286 (36.71%), Postives = 159/286 (55.59%), Query Frame = 1
Query:    1 ISALLSLSHSLNELRVHGSKAFTESMQKFAHKAP-----TNPVW--RAVVAHERWKALSVLLGQL----SKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEGGAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFA-SPTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++ L+SL H  + L +HG   F E ++K   +       T P W  + ++    ++AL + L  +    S  G     PKL+KL E++ EH +R   A   +R IVFT  R SVTEIV+ L + +        L+    FVGQ G    +KG  Q+QQ + ++  R G  N LV+T IAEEGLD+G V L+V +DA+ SP RM+QR+GRTGR  VG+V+ LV++G E  +   S +  + +++AL + + KF  +  P MV     P L+ + +   +F AS+IAG
Sbjct:  442 LALLVSLLHGRDLLTLHGLVGFNEYVEKLRKEVQEPEEGTRPTWAKKDLIGSTEFQALQLGLQHVAAASSTDGDTGSHPKLLKLREVLHEHFQRHATAQSSTRAIVFTQYRTSVTEIVNVLNALAP-------LLKVQPFVGQ-GTSKESKGQTQKQQQEIVRKFRQGAFNVLVATCIAEEGLDIGEVDLIVSFDALTSPVRMIQRMGRTGRKRVGKVIILVTEGDEEKKLARSVAAAKTVSRALTTFKNKFTYAKCPRMVPMGVTPQLSALAMEIPEFHASQIAG 719          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: K3WDN7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDN7_GLOUD)

HSP 1 Score: 149 bits (375), Expect = 4.080e-37
Identity = 102/290 (35.17%), Postives = 159/290 (54.83%), Query Frame = 1
Query:    1 ISALLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNP--------VWRAVVAHERWKALSVL----LGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEGGAK---GMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFA-SPTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++ L+SL H+   L VHG  +F E +  +  +  T          + ++   H    +L+ L     G+ S +G     PKL+KL E++ EH  R       +R IVFT  R SV EIVS L   S        L+    FVGQ G  G AK   G +Q+QQ + ++  R+G+ N LV+T IAEEGLD+G V L+V +DA+ SP RM+QR+GRTGR  VG+V+ LV++G E  +   S +  + +++A+ + + KF  +  P M+     P L+++++   +F +S+I G
Sbjct:  356 LALLVSLLHAKELLTVHGLSSFQEYVNGWIEERETGSRLSWSKKEMMQSAEFHSLVLSLNALGHDMSGKSSSNGKSSSHPKLLKLREVLHEHFSRHVTGNSSTRAIVFTQYRTSVNEIVSLLNQMSP-------LLKVQAFVGQ-GASGKAKESKGQSQKQQQEIVKKFRNGEFNVLVATCIAEEGLDIGEVDLIVSFDALTSPVRMIQRMGRTGRKRVGKVIILVTEGDEEKKLARSVASAKTVSRAMTTFKSKFVYAKCPRMIPSGIQPELSKLEMLIPEFHSSQIGG 637          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: A0A024UK80_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UK80_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.070e-36
Identity = 103/278 (37.05%), Postives = 148/278 (53.24%), Query Frame = 1
Query:    1 ISALLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPVWRAVVAHERWKALSVLLGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQA---GVEGGAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFAS-PTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++ L+SL H  + L VHG   FT  + KF ++  + P    V + E     +++  Q          PKL++L  ++ EH  R +  G  +R IVFT  R SVTEIV+ L + +        LI   +F+GQ    G EG  KG  Q+QQ + +   RDG  N LV+T IAEEGLD+G V L+V +D + SP RM+QR+GRTGR  VG VV LV++G E  + + S S  + + ++L   + KF   P+  MV     P L    +T   F A+ I G
Sbjct:  288 LALLISLLHGKDILNVHGIGNFTAFLDKFTNENFSGPKKLVVESPEFAHLQALVHAQTGGGRAAANNPKLVQLQHVLSEHFTRHKQGGSSTRCIVFTQYRESVTEIVALLATMAP-------LIKVQQFIGQGTSKGKEG--KGQTQKQQQEIVAKFRDGHFNVLVATCIAEEGLDIGEVDLIVSFDCLTSPVRMIQRMGRTGRKRVGRVVLLVTEGDEEKKLERSVSAAKSVNRSLTIFKDKFKCVPSARMVPRGITPRLTESSMTVPAFQAALIGG 556          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: A0A6A4EXG4_9STRA (Fanconi anemia group M protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EXG4_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.470e-36
Identity = 105/284 (36.97%), Postives = 159/284 (55.99%), Query Frame = 1
Query:    1 ISALLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPV-W--RAVVAHERWKALSVLLG---QLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEGGAK---GMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFA-SPTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++ L+SL H+ + L  HG  +F E +  +  +     + W  R ++    +++L + LG     S        PKL+KL E++ EH +R  AAG  +R IVFT  RASV+EIVS L+  +        L+    F+GQ G  G AK   G  Q+ Q + ++  R G+ N LV+T IAEEGLD+G V L+V +DA+ SP RM+QR+GRTGR  VG V+ LV++G E  +   S S  + +++AL + + KF  S  P M+     PAL  +++    F AS++ G
Sbjct:  478 LALLVSLLHAKSLLIGHGLTSFREQILNWTEERKKGKMSWSKREMLQSSEFQSLELSLGVTEDASSSTNTASHPKLVKLREVLLEHFQRHAAAGSSTRAIVFTQYRASVSEIVSLLRPLAP-------LLNVQPFIGQ-GSSGKAKENKGQTQKVQQEIVRRFRLGEFNVLVATCIAEEGLDIGEVDLIVSFDALTSPVRMIQRMGRTGRKRVGRVIILVTEGDEQKKLKRSASAAKTVSRALTTYKSKFKYSKCPRMLPTGICPALKELEMNIPTFHASQVGG 753          
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Match: G4Z323_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z323_PHYSP)

HSP 1 Score: 147 bits (371), Expect = 2.250e-36
Identity = 101/283 (35.69%), Postives = 158/283 (55.83%), Query Frame = 1
Query:    1 ISALLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPV-W--RAVVAHERWKALSVLLGQL---SKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTRASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQ--AGVEGGAKGMNQRQQLQAIQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTGRNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFA-SPTPLMVKGSRLPALARVKITHVDFCASRIAG 822
            ++ L+SL H+ + L  HG  +F + +  +A +     + W  R ++    +++L + LG     +        PKL+KL E++ EH +R  AAG  +R IVFT  R SV+EIV+ L+  S        L+    F+GQ  +G     KG  Q+ Q + ++  R G+ N LV+T IAEEGLD+G V L+V +DA+ SP RM+QR+GRTGR  VG V+ LV++G E  +   S S  + +++AL + + KF  S  P M+     PAL  +++    F AS++ G
Sbjct:  500 LALLVSLLHAKSLLTGHGLSSFRDQILNWAEERKKGKMSWSKREMLQSSEFQSLELSLGVTEGATSSANTASHPKLVKLREVLLEHFQRHSAAGSSTRAIVFTQYRVSVSEIVALLRPLSP-------LLNVQPFIGQGSSGKSKENKGQTQKVQQEIVRRFRLGEFNVLVATCIAEEGLDIGEVDLIVSFDALTSPVRMIQRMGRTGRKRVGRVIILVTEGDEQKKLARSASAAKTVSRALTTYKNKFKYSKCPRMIPTGICPALKELEMNIPTFHASQVGG 775          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72639.17259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4G9K8_9STRA1.280e-3937.32Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A3R7Y455_9STRA5.440e-3937.36Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A397FKJ0_9STRA8.620e-3938.49Helicase C-terminal domain-containing protein (Fra... [more]
A0A418BWH5_9STRA1.940e-3837.00Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A397CL87_9STRA2.350e-3837.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A8K1CNQ3_PYTOL3.640e-3836.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WDN7_GLOUD4.080e-3735.17Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024UK80_9STRA1.070e-3637.05Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A4EXG4_9STRA1.470e-3636.97Fanconi anemia group M protein n=6 Tax=Phytophthor... [more]
G4Z323_PHYSP2.250e-3635.69Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72639contigM-pyrifera_M_contig72639:294..1115 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.4
Seed ortholog evalue6.3e-34
Seed eggNOG ortholog65071.PYU1_T003078
Preferred nameFANCM
KEGG koko:K10896
KEGG Pathwayko03460,map03460
KEGG ModuleM00413
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000019,GO:0000280,GO:0000712,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003682,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010605,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0031297,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0036297,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043240,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045003,GO:0045005,GO:0045132,GO:0045910,GO:0045934,GO:0045950,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0060255,GO:0061982,GO:0065007,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071821,GO:0071840,GO:0080090,GO:0090304,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901576,GO:1903046
EggNOG free text desc.DEAD DEAH box RNA helicase. Source PGD
EggNOG OGs1MF4K@121069,COG1111@1,KOG0354@2759
COG Functional cat.A
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03400
Exons1
Model size822
Cds size822
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.8593376-CDS-M-pyrifera_M_contig72639:293..11151622816622.8593376-CDS-M-pyrifera_M_contig72639:293..1115Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72639 294..1115 -
1692278082.7578993-CDS-M-pyrifera_M_contig72639:293..11151692278082.7578993-CDS-M-pyrifera_M_contig72639:293..1115Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72639 294..1115 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72639.17259.1prot_M-pyrifera_M_contig72639.17259.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72639 294..1115 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72639.17259.1

>prot_M-pyrifera_M_contig72639.17259.1 ID=prot_M-pyrifera_M_contig72639.17259.1|Name=mRNA_M-pyrifera_M_contig72639.17259.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=274bp
ISALLSLSHSLNELRVHGSKAFTESMQKFAHKAPTNPVWRAVVAHERWKA
LSVLLGQLSKHGTHIIQPKLIKLAEIVGEHLRRKQAAGVESRVIVFTSTR
ASVTEIVSYLKSGSIESVDRGGLIIPGEFVGQAGVEGGAKGMNQRQQLQA
IQALRDGKINTLVSTSIAEEGLDVGSVGLVVMYDAVGSPTRMVQRIGRTG
RNCVGEVVSLVSKGAESSRHDGSFSQYRRIAKALRSARFKFASPTPLMVK
GSRLPALARVKITHVDFCASRIAG
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mRNA from alignment at M-pyrifera_M_contig72639:294..1115-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72639.17259.1 ID=mRNA_M-pyrifera_M_contig72639.17259.1|Name=mRNA_M-pyrifera_M_contig72639.17259.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig72639:294..1115- (Macrocystis pyrifera P11B4 male)
ATATCTGCTCTTCTCTCTCTCTCCCATTCTCTCAATGAGTTGAGGGTGCA TGGGAGTAAGGCGTTTACGGAGAGTATGCAGAAGTTTGCACACAAGGCGC CAACAAACCCAGTGTGGAGAGCAGTTGTAGCACATGAGAGGTGGAAGGCA CTATCTGTTTTGTTGGGACAGTTGTCAAAACATGGGACTCATATTATTCA ACCAAAGTTGATCAAGTTGGCAGAGATTGTTGGTGAGCACTTGAGAAGAA AACAGGCTGCTGGGGTCGAGTCGAGAGTGATTGTGTTTACTTCTACTCGT GCATCTGTCACTGAAATTGTGTCATATCTCAAGAGTGGATCGATCGAGTC TGTAGATCGTGGTGGGTTGATCATTCCTGGAGAATTCGTTGGACAAGCAG GGGTAGAAGGAGGTGCGAAAGGGATGAATCAACGGCAGCAACTACAAGCA ATCCAAGCACTTCGTGATGGAAAGATTAACACCCTCGTGTCCACTTCCAT TGCAGAGGAAGGCTTGGATGTTGGTTCGGTTGGATTGGTGGTGATGTATG ATGCTGTAGGTTCTCCTACACGAATGGTGCAACGAATTGGTCGTACAGGT AGGAATTGTGTTGGTGAAGTTGTAAGTCTTGTGTCCAAAGGTGCAGAATC ATCAAGACATGATGGATCATTTTCTCAATACCGTCGTATTGCCAAAGCTC TCCGATCAGCACGTTTCAAGTTCGCTTCACCAACCCCACTCATGGTCAAG GGATCACGACTTCCTGCACTAGCAAGAGTAAAAATCACTCATGTAGACTT TTGCGCCAGTCGAATTGCTGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig72639:294..1115-

>mRNA_M-pyrifera_M_contig72639.17259.1 ID=mRNA_M-pyrifera_M_contig72639.17259.1|Name=mRNA_M-pyrifera_M_contig72639.17259.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1644bp|location=Sequence derived from alignment at M-pyrifera_M_contig72639:294..1115- (Macrocystis pyrifera P11B4 male)
ATATCTGCTCTTCTCTCTCTCTCCCATTCTCTCAATGAGTTGAGGGTGCA
TGGGAGTAAGGCGTTTACGGAGAGTATGCAGAAGTTTGCACACAAGGCGC
CAACAAACCCAGTGTGGAGAGCAGTTGTAGCACATGAGAGGTGGAAGGCA
CTATCTGTTTTGTTGGGACAGTTGTCAAAACATGGGACTCATATTATTCA
ACCAAAGTTGATCAAGTTGGCAGAGATTGTTGGTGAGCACTTGAGAAGAA
AACAGGCTGCTGGGGTCGAGTCGAGAGTGATTGTGTTTACTTCTACTCGT
GCATCTGTCACTGAAATTGTGTCATATCTCAAGAGTGGATCGATCGAGTC
TGTAGATCGTGGTGGGTTGATCATTCCTGGAGAATTCGTTGGACAAGCAG
GGGTAGAAGGAGGTGCGAAAGGGATGAATCAACGGCAGCAACTACAAGCA
ATCCAAGCACTTCGTGATGGAAAGATTAACACCCTCGTGTCCACTTCCAT
TGCAGAGGAAGGCTTGGATGTTGGTTCGGTTGGATTGGTGGTGATGTATG
ATGCTGTAGGTTCTCCTACACGAATGGTGCAACGAATTGGTCGTACAGGT
AGGAATTGTGTTGGTGAAGTTGTAAGTCTTGTGTCCAAAGGTGCAGAATC
ATCAAGACATGATGGATCATTTTCTCAATACCGTCGTATTGCCAAAGCTC
TCCGATCAGCACGTTTCAAGTTCGCTTCACCAACCCCACTCATGGTCAAG
GGATCACGACTTCCTGCACTAGCAAGAGTAAAAATCACTCATGTAGACTT
TTGCGCCAGTCGAATTGCTGGCATATCTGCTCTTCTCTCTCTCTCCCATT
CTCTCAATGAGTTGAGGGTGCATGGGAGTAAGGCGTTTACGGAGAGTATG
CAGAAGTTTGCACACAAGGCGCCAACAAACCCAGTGTGGAGAGCAGTTGT
AGCACATGAGAGGTGGAAGGCACTATCTGTTTTGTTGGGACAGTTGTCAA
AACATGGGACTCATATTATTCAACCAAAGTTGATCAAGTTGGCAGAGATT
GTTGGTGAGCACTTGAGAAGAAAACAGGCTGCTGGGGTCGAGTCGAGAGT
GATTGTGTTTACTTCTACTCGTGCATCTGTCACTGAAATTGTGTCATATC
TCAAGAGTGGATCGATCGAGTCTGTAGATCGTGGTGGGTTGATCATTCCT
GGAGAATTCGTTGGACAAGCAGGGGTAGAAGGAGGTGCGAAAGGGATGAA
TCAACGGCAGCAACTACAAGCAATCCAAGCACTTCGTGATGGAAAGATTA
ACACCCTCGTGTCCACTTCCATTGCAGAGGAAGGCTTGGATGTTGGTTCG
GTTGGATTGGTGGTGATGTATGATGCTGTAGGTTCTCCTACACGAATGGT
GCAACGAATTGGTCGTACAGGTAGGAATTGTGTTGGTGAAGTTGTAAGTC
TTGTGTCCAAAGGTGCAGAATCATCAAGACATGATGGATCATTTTCTCAA
TACCGTCGTATTGCCAAAGCTCTCCGATCAGCACGTTTCAAGTTCGCTTC
ACCAACCCCACTCATGGTCAAGGGATCACGACTTCCTGCACTAGCAAGAG
TAAAAATCACTCATGTAGACTTTTGCGCCAGTCGAATTGCTGGC
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