Homology
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
D8LD24_ECTSI (THO complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD24_ECTSI)
HSP 1 Score: 767 bits (1980), Expect = 2.120e-253
Identity = 408/609 (67.00%), Postives = 459/609 (75.37%), Query Frame = 1
Query: 1 TVQTLSKTASSRSNSSAVNANLAPAAVAARVVPTPDLKHMQRLSGYGSGFATTDKLSEAVGVLAPLLKAFGAHLGRDPIIYFRVCRVLAAVNSRNPIPSAGKSKTSGSRGTSNSSS----------------------------------------------------AAAREKSNGNAAVSVDDKDPLKAFHSLFGLSPMEAKEVYRRGEAEAGAGGEGGAKAVSRELDRRKAAYIRVVLTVAPSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLWVRNKCPTIETLLTKYSLEPRVVFHIWRPVINESLMKHWFPKTGAK 1671
T+ SKTA SRS A L P + DLK +QRL GYG+GF + LSEAV VLAPLLK G +LGRDP ++ RVCRVLAAV+SRNP+ K+ TS AA++ A + +DPLK FHSLFGLSP EA+E++RRGEAE GAG G A+ +ELDRRK AY+RVVLTVAPSLGMTHANPGMQ EVW MLAELPY DRFMLYGAWRGHGMEK+ALGVKH QYAVAEI+AGA+ISRLIKMLTSDNVKDMARKLGK SH+HPLLFAEK LNQLESYDNFISMVADSM+++G TL LDC+AYTMVQHLCQ+NRSFVSDSGL LERWV+NL+TFAGLLHRK+ + D KPL SW VR+L EGGEPAMAAGKVLREVLH+AGGVQVLDGWSITQAQVDGKGGG+VLRQENASFGSTVKP+++AK LQ+ EKAGASLPLL+LPA QA +LLYEGGSLDDQMRGKPQPHLKVLGHR+DETHTTLLQA+EFVCSK W+++KCP I+TLLT Y LEPRVVFHIWRPVINE+L+K WFPK G K
Sbjct: 676 TLPVTSKTAVSRSTM-ANGMTLPPTLKSTPASNLKDLKDLQRLPGYGTGFVKPETLSEAVEVLAPLLKIVGPYLGRDPTMFARVCRVLAAVSSRNPLNIVVKTSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAKDPLGAKDAAA---RDPLKTFHSLFGLSPAEARELHRRGEAEGGAGA--GEAALKKELDRRKVAYVRVVLTVAPSLGMTHANPGMQQEVWNMLAELPYLDRFMLYGAWRGHGMEKYALGVKHPQYAVAEIAAGAEISRLIKMLTSDNVKDMARKLGKSSHSHPLLFAEKALNQLESYDNFISMVADSMKFVGKTLGLDCMAYTMVQHLCQSNRSFVSDSGLDLERWVTNLSTFAGLLHRKNPDADSKPLLSWAVRSLGEGGEPAMAAGKVLREVLHKAGGVQVLDGWSITQAQVDGKGGGDVLRQENASFGSTVKPIKRAKVILQEATEKAGASLPLLVLPALQAGSLLYEGGSLDDQMRGKPQPHLKVLGHRADETHTTLLQAMEFVCSKAWIKSKCPAIKTLLTTYGLEPRVVFHIWRPVINENLIKCWFPKAGTK 1278
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
F0YI77_AURAN (THO complex subunit 2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI77_AURAN)
HSP 1 Score: 192 bits (488), Expect = 1.390e-48
Identity = 122/364 (33.52%), Postives = 195/364 (53.57%), Query Frame = 1
Query: 577 PSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSD--NVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVC------SKLWVRNK------CPTIETLLTKYSLEPRVVFHIWRPVI 1626
P+L + NPG EVW LPY +R +LY AWRG G+++ A+G+KH + A AE AG D + +K + ++ N K + R L K +H++P + +L+Q+ESYDN I + +S ++ LALD ++Y + HL T+R + D+G+ + W LA F G+ +R + +T+ + L +++ L GG + V E+L + GG +VL+ I+ AQ+ G GGEVLR+E +F K ++A + LQD + + P+L L A Q L++G +D H+K LG D L+Q VEF+ + L + K P ++TL +EP+V FH RP++
Sbjct: 762 PTLSLMPGNPGCVLEVWAATRCLPYCERHLLYKAWRGRGVDRTAIGLKHFEVARAECEAGHDARQALKRVANEKKNAKHVGRALAKTAHSNPFVVFHIILSQIESYDNMIQPIIESFGFM-TPLALDVLSYMLPLHLADTSRHKLQDNGIHISHWFQYLANFTGVFYRVYPQTELRCLIDFLLLRLKAGGSHELL---VFNELLARMGGCEVLE--DISDAQLGGLAGGEVLRREIFAF---EKASKRAISRLQDALCTPDKAAPMLALVAQQRGYALFKG-EMD---------HVKQLGQLFDRCQRVLVQLVEFLARSTERPTNLGTQEKHSYLELLPDLQTLCGAMCVEPQVAFHAARPLM 1106
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
A0A7S3UTZ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTZ1_HETAK)
HSP 1 Score: 171 bits (434), Expect = 7.420e-46
Identity = 96/271 (35.42%), Postives = 159/271 (58.67%), Query Frame = 1
Query: 658 RFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLG 1470
R+ +Y AW G G+E+ LG KH + A+AE+ G ++K L+ +N K R+L K +HA+P + VL+Q++SYDN I + DS+R++ LALD +++++V HL + R + D GL + +W++ L+ F G+L+RK+ T+ L ++V L G + VL+E+L + GGV+ + G +++ Q+ G GGE LR E +FG + R+A+ L+ + +GA+LPLL+L A Q +LYE + HLK++G
Sbjct: 4 RYDVYAAWVGDGLEREGLGQKHVEVALAELRCGRRARDVLKRLSKENAKHTGRQLAKVAHANPHVLFNAVLSQIQSYDNLIQPIVDSLRFM-TPLALDVLSFSLVAHL-NSGRDKMQDDGLFVSQWLAYLSQFVGVLYRKYPSTELHGLLVFLVNRLRSGHSLDLV---VLKELLVRVGGVE-MPGTELSEKQLHGMAGGEALRAETVAFGVKERAARRAQAALRGALFASGAALPLLLLIAQQRSHILYETAT----------QHLKLMG 258
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
A0A316YN76_9BASI (THO complex subunit 2 n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YN76_9BASI)
HSP 1 Score: 178 bits (451), Expect = 9.170e-44
Identity = 111/377 (29.44%), Postives = 200/377 (53.05%), Query Frame = 1
Query: 520 SRELDRRKAAYIRVVLT-VAPSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQE-----NASFGSTVKP-VRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLW---VRNKCPTIETLLTKYSLEPRVVFHIWRP 1620
+RE D K A++ VV + + P+L MT N G+ EVW ++ +LPY +R+ LYG W+ ++ L V+ A+ + ++K ++SDN+K R L K SHA+P +F LNQ+++YDN I+ + +S +YL D + ++ LC + G ++ +W+ +LA F G L+R++ DC P+ +I L E + ++RE++ + G++ L +++ AQ+ GG +LR E NA+ +T + +R++ L + + ++PLL+L A Q +A ++ + + + HLK LG+ D L Q +EF+ ++L + PT++ L+ ++ +EP + FHI RP
Sbjct: 652 AREDD--KTAWLEVVRSFLLPALSMTSGNSGLVSEVWLIIRQLPYTERYALYGEWKYSIYKRPELRVRQAE-------TEKEAKGILKRISSDNLKLSGRALAKASHANPTVFFTVALNQVQAYDNLIAPIVESAKYL-THFEYDVFGFNLIDALCNPEKERTKQDGTSVSQWLKSLAAFTGTLYRRYAMMDCSPVLQYIANQLKENNSKDLV---IIRELVLKMAGIEPLA--NLSDAQIAALTGGRLLRMEAMMVANAAVATTARANLRRSGARLLAALLDSRMAIPLLVLIAQQRQACVH--------LVPESEAHLKYLGNLFDTCQEVLFQYIEFLHNQLEPSAYASLMPTLKDLVGRFGVEPAIGFHIARP 1005
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
D3B7H9_POLPP (THO complex subunit 2 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B7H9_POLPP)
HSP 1 Score: 174 bits (440), Expect = 2.300e-42
Identity = 104/369 (28.18%), Postives = 200/369 (54.20%), Query Frame = 1
Query: 559 VVLTVAPSLG-MTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLWVRNKCP---TIETLLTKYSLEPRVVFHIWRPVINESLMKHWF 1653
+V + PSL M+ +NP + EVW +L + Y R+ LY WR A+ K+ A+A+ A+I ++++ ++ +NVK + R +GK SH HP++ E V++ +E+YD+ + + DS+RY +L+ D ++Y +++ R+ + G + W +L+ F G L+RK+ +T+ + L +IV L + + VL+E+L + GG+++++ QV+ +GGGE L+QE+ + ++ + +++A L+D + + + PL IL A Q ++Y ++ G +++ + D+ TLLQ EF+ + + ++ LLT Y LEP +HI+RP+++ H++
Sbjct: 497 IVNVILPSLSYMSTSNPAVSFEVWSILGGMNYHVRYNLYAEWR-------AIYSKYLPLAIAKAEVTAEIRKILRRISKENVKQLGRTIGKLSHLHPMIVLEAVVSSVENYDSLVHPLVDSLRYC-TSLSFDVLSYILLERFT-IQRAKLKADGTNIASWYQSLSQFVGFLYRKYPQTELEGLLQYIVNQLKDNNSLDLI---VLKELLSKMGGIEIIE--DPPDNQVEAQGGGETLKQESNTMNNS-RNIKRAVTKLKDTLIECKLAFPLFILLAKQRINIVYS-----NEQTG----NIRGIADLYDKCQETLLQYTEFLSTSVLPKDYAAFFGNFSELLTVYGLEPETAYHIYRPLLSYLKAIHYY 841
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
E9Q5E2_MOUSE (THO complex subunit 2 n=24 Tax=Muroidea TaxID=337687 RepID=E9Q5E2_MOUSE)
HSP 1 Score: 168 bits (425), Expect = 1.850e-40
Identity = 102/352 (28.98%), Postives = 176/352 (50.00%), Query Frame = 1
Query: 577 PSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLWVRN---KCPTIETLLTKYSLEPRVVFHIWRPV 1623
PSL + N M E+W M PY+ R+ LYG W+ H L VK Y + ++K LT +NVK R++GK SH++P + + +L+Q++ YDN I+ V DS++YL L D +AY +++ L + + T+ W+ +LA+F G + RK+ D L ++ L G + +L+EV+ + G++V + +T Q++ GGE L+ E FG ++ +K+ L+D + +LPL +L A Q ++++ G + HLK++G D+ H TL+Q F+ S L + + P+I+ L ++ F + RP+
Sbjct: 493 PSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAYTIDRAKY------IMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL-TALNYDVLAYCIIEALANPEKERMKHDDTTISNWLQSLASFCGAVFRKY-PIDLAGLLQYVANQLKAGKSFDLL---ILKEVVQKMAGIEVTE--EMTMEQLEAMTGGEQLKAEGGYFGQ-IRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGG---------EKHLKLVGKLYDQCHDTLVQFGGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPM 821
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
A0A8C5NW97_JACJA (THO complex subunit 2 n=2 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5NW97_JACJA)
HSP 1 Score: 168 bits (425), Expect = 1.850e-40
Identity = 101/352 (28.69%), Postives = 176/352 (50.00%), Query Frame = 1
Query: 577 PSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLWVRN---KCPTIETLLTKYSLEPRVVFHIWRPV 1623
PSL + N M E+W M PY+ R+ LYG W+ H L VK + ++K LT +NVK R++GK SH++P + + +L+Q++ YDN I+ V DS++YL L D +AY +++ L + + T+ W+ +LA+F G + RK+ D L ++ L G + +L+EV+ + G+++ + +T Q++ GGE L+ E FG ++ +K+ L+D + G +LPL +L A Q ++++ G + HLK++G D+ H TL+Q F+ S L + + P+I+ L ++ F + RP+
Sbjct: 493 PSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNDTYNSHPLLVKVKAQTIDRAKY------IMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL-TALNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKY-PIDLAGLLQYVANQLKAGKSFDLL---ILKEVVQKMSGIEITE--DMTMHQLEAMTGGEQLKAEGGYFGQ-IRNTKKSSQRLKDALLDHGLALPLCLLMAQQRNGVIFQEGG---------EKHLKLIGKLYDQCHDTLVQFGRFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPM 821
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
A0A803XVD1_MELGA (THO complex subunit 2 n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=A0A803XVD1_MELGA)
HSP 1 Score: 167 bits (424), Expect = 2.400e-40
Identity = 105/376 (27.93%), Postives = 186/376 (49.47%), Query Frame = 1
Query: 520 SRELDRRKAAYIRVVLTVA-----PSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLWVRN---KCPTIETLLTKYSLEPRVVFHIWRPV 1623
S++ D+ K VL++ PSL + N M E+W M PY+ R+ LYG W+ H L VK + ++K LT +NVK R++GK SHA+P + + +L+Q++ YDN I+ V DS++YL +L D +AY +++ L + + T+ W+ +LA+F G + RK+ + L ++ L G + +L+EV+ + G+++ + +T Q++ GGE L+ E FG ++ +K+ L+D + +LPL +L A Q ++++ G + HLK++G D+ H TL+Q F+ S L + + P+I+ L ++ F + RP+
Sbjct: 351 SKQEDKEKMILFSCVLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKY------IMKRLTKENVKPSGRQIGKLSHANPTILFDYILSQIQKYDNLITPVVDSLKYL-TSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKY-PIELAGLLQYVANQLKAGKSFDLL---ILKEVVQKMAGIEITE--EMTMEQLEAMTGGEQLKAEGGYFGQ-IRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGG---------EKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPM 703
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
UPI000CCC1EB8 (THO complex subunit 2-like n=2 Tax=Myotis TaxID=9434 RepID=UPI000CCC1EB8)
HSP 1 Score: 167 bits (423), Expect = 3.330e-40
Identity = 99/352 (28.12%), Postives = 179/352 (50.85%), Query Frame = 1
Query: 577 PSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLWVRN---KCPTIETLLTKYSLEPRVVFHIWRPV 1623
PSL + N M E+W M PY+ R+ LYG W+ H L VK + ++ ++K LT +NVK R++GK SH++P + + +L+Q++ YDN I+ V DS++YL +L D +AY +++ L + + T+ W+ +LA+F G + RK+ D L ++ L G + +L+EV+ + G+++ + +T Q++ GGE L+ E FG ++ +K+ L+D + +LPL ++ A Q ++++ G + HLK++G D+ H TL+Q F+ S L + + P+I+ L ++ + F + RP+
Sbjct: 493 PSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVKVKAQTIDKVKY------IMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL-TSLNYDILAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKY-PIDLAGLLQYVANQLKTGRSFDLL---ILKEVVQKMAGIEITE--EMTMEQLEAMTGGEQLKAEGGYFGQ-IRNTKKSSQRLKDALLDYDLALPLCLIIAQQRNGVIFQEGG---------EKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHIPHDAAFFLSRPM 821
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Match:
A0A553P853_TIGCA (THO complex subunit 2 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P853_TIGCA)
HSP 1 Score: 167 bits (422), Expect = 4.350e-40
Identity = 103/369 (27.91%), Postives = 195/369 (52.85%), Query Frame = 1
Query: 550 YIRVVLTVA---PSLGMTHANPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEISAGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFISMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLATFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGVQVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKAGASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTLLQAVEFVCSKLWVRN---KCPTIETLLTKYSLEPRVVFHIWRPVINESL 1638
Y + LT A PSL + +N + E+W +L PY R+ L+G W+ + + H L ++ + I R+++ ++ +NVK +R +GK +H+ P L E +L+Q++ YDN I+ V DS+RYL +L+ D + Y++++ L + G ++ W+++L+ F G +++K+ + L ++ L + +++EV+ + GG++ + +T Q+D GGE+LRQE SF + +K +K+ L+D + ++PL +L A Q ++Y+ +D HLK++G D+ TL+Q F+ S L + + + P I+TLL++Y + + F + RP+ N +
Sbjct: 489 YETITLTDAVLLPSLSLAESNCCLAEEIWSVLRVFPYHVRYHLFGQWKANTYDAHPLLLRKKAITLK------GIKRIMQRISKENVKPTSRLIGKITHSSPGLVFEYILSQIQLYDNMITPVVDSLRYL-TSLSFDVLGYSIIEALNNPEKDRTKHDGTSISLWLTSLSNFCGAVYKKYN-IELTGLLQYVANQLKNKHSLDLL---IMKEVVLKMGGIEGAE--EMTSEQIDAMAGGELLRQEAGSF-TQIKNTKKSSQRLKDALIDHDLAVPLCLLMAQQRNCVVYQ--ETEDS-------HLKLVGKLFDQCQDTLVQFGTFLASNLSIDDYTRRLPPIQTLLSRYHVNLDLAFFLARPMFNHQI 834
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7242.17219.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 25
0 1 Expect = 2.12e-253 / Id = 67.00 Expect = 1.39e-48 / Id = 33.52 Expect = 7.42e-46 / Id = 35.42 Expect = 9.17e-44 / Id = 29.44 Expect = 2.30e-42 / Id = 28.18 Expect = 1.85e-40 / Id = 28.98 Expect = 1.85e-40 / Id = 28.69 Expect = 2.40e-40 / Id = 27.93 Expect = 3.33e-40 / Id = 28.13 Expect = 4.35e-40 / Id = 27.91 Sequence D8LD24_ECTSI F0YI77_AURAN A0A7S3UTZ1_HETAK A0A316YN76_9BASI D3B7H9_POLPP E9Q5E2_MOUSE A0A8C5NW97_JACJA A0A803XVD1_MELGA UPI000CCC1EB8 A0A553P853_TIGCA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 769.2
Seed ortholog evalue 1.3e-219
Seed eggNOG ortholog 2880.D8LD24
Preferred name ZC3H13
KEGG ko ko:K12837,ko:K12879
KEGG Pathway ko03013,ko03040,map03013,map03040
KEGG Module M00405,M00406
Hectar predicted targeting category other localisation
GOs GO:0001510,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0016071,GO:0016556,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034641,GO:0034708,GO:0036396,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045293,GO:0046483,GO:0050789,GO:0050793,GO:0051239,GO:0065007,GO:0070013,GO:0071704,GO:0080009,GO:0090304,GO:1901360,GO:1902494,GO:1990234,GO:2000036
EggNOG free text desc. mRNA transport
EggNOG OGs KOG1874@1,KOG1874@2759
COG Functional cat. S
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko03019,ko03041
Exons 11
Model size 1671
Cds size 1671
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816620.8892872-CDS-M-pyrifera_M_contig7242:3476..3715 1622816620.8892872-CDS-M-pyrifera_M_contig7242:3476..3715 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 3477..3715 +
1692278081.6732125-CDS-M-pyrifera_M_contig7242:3476..3715 1692278081.6732125-CDS-M-pyrifera_M_contig7242:3476..3715 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 3477..3715 +
1622816620.9031627-CDS-M-pyrifera_M_contig7242:4265..4275 1622816620.9031627-CDS-M-pyrifera_M_contig7242:4265..4275 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 4266..4275 +
1692278081.6875937-CDS-M-pyrifera_M_contig7242:4265..4275 1692278081.6875937-CDS-M-pyrifera_M_contig7242:4265..4275 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 4266..4275 +
1622816620.9148247-CDS-M-pyrifera_M_contig7242:4717..5089 1622816620.9148247-CDS-M-pyrifera_M_contig7242:4717..5089 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 4718..5089 +
1692278081.7004056-CDS-M-pyrifera_M_contig7242:4717..5089 1692278081.7004056-CDS-M-pyrifera_M_contig7242:4717..5089 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 4718..5089 +
1622816620.9298198-CDS-M-pyrifera_M_contig7242:5893..6016 1622816620.9298198-CDS-M-pyrifera_M_contig7242:5893..6016 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 5894..6016 +
1692278081.712688-CDS-M-pyrifera_M_contig7242:5893..6016 1692278081.712688-CDS-M-pyrifera_M_contig7242:5893..6016 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 5894..6016 +
1622816620.944299-CDS-M-pyrifera_M_contig7242:7021..7161 1622816620.944299-CDS-M-pyrifera_M_contig7242:7021..7161 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 7022..7161 +
1692278081.723426-CDS-M-pyrifera_M_contig7242:7021..7161 1692278081.723426-CDS-M-pyrifera_M_contig7242:7021..7161 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 7022..7161 +
1622816620.9587922-CDS-M-pyrifera_M_contig7242:7941..8088 1622816620.9587922-CDS-M-pyrifera_M_contig7242:7941..8088 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 7942..8088 +
1692278081.7340045-CDS-M-pyrifera_M_contig7242:7941..8088 1692278081.7340045-CDS-M-pyrifera_M_contig7242:7941..8088 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 7942..8088 +
1622816620.9700048-CDS-M-pyrifera_M_contig7242:8367..8500 1622816620.9700048-CDS-M-pyrifera_M_contig7242:8367..8500 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 8368..8500 +
1692278081.749686-CDS-M-pyrifera_M_contig7242:8367..8500 1692278081.749686-CDS-M-pyrifera_M_contig7242:8367..8500 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 8368..8500 +
1622816620.9819999-CDS-M-pyrifera_M_contig7242:9045..9213 1622816620.9819999-CDS-M-pyrifera_M_contig7242:9045..9213 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 9046..9213 +
1692278081.7601967-CDS-M-pyrifera_M_contig7242:9045..9213 1692278081.7601967-CDS-M-pyrifera_M_contig7242:9045..9213 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 9046..9213 +
1622816620.994095-CDS-M-pyrifera_M_contig7242:10142..10271 1622816620.994095-CDS-M-pyrifera_M_contig7242:10142..10271 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 10143..10271 +
1692278081.7718425-CDS-M-pyrifera_M_contig7242:10142..10271 1692278081.7718425-CDS-M-pyrifera_M_contig7242:10142..10271 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 10143..10271 +
1622816621.0052972-CDS-M-pyrifera_M_contig7242:11157..11265 1622816621.0052972-CDS-M-pyrifera_M_contig7242:11157..11265 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 11158..11265 +
1692278081.7883456-CDS-M-pyrifera_M_contig7242:11157..11265 1692278081.7883456-CDS-M-pyrifera_M_contig7242:11157..11265 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 11158..11265 +
1622816621.0158827-CDS-M-pyrifera_M_contig7242:11946..12048 1622816621.0158827-CDS-M-pyrifera_M_contig7242:11946..12048 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 11947..12048 +
1692278081.802933-CDS-M-pyrifera_M_contig7242:11946..12048 1692278081.802933-CDS-M-pyrifera_M_contig7242:11946..12048 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig7242 11947..12048 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7242.17219.1
>prot_M-pyrifera_M_contig7242.17219.1 ID=prot_M-pyrifera_M_contig7242.17219.1|Name=mRNA_M-pyrifera_M_contig7242.17219.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=557bp
TVQTLSKTASSRSNSSAVNANLAPAAVAARVVPTPDLKHMQRLSGYGSGF ATTDKLSEAVGVLAPLLKAFGAHLGRDPIIYFRVCRVLAAVNSRNPIPSA GKSKTSGSRGTSNSSSAAAREKSNGNAAVSVDDKDPLKAFHSLFGLSPME AKEVYRRGEAEAGAGGEGGAKAVSRELDRRKAAYIRVVLTVAPSLGMTHA NPGMQGEVWQMLAELPYEDRFMLYGAWRGHGMEKHALGVKHAQYAVAEIS AGADISRLIKMLTSDNVKDMARKLGKPSHAHPLLFAEKVLNQLESYDNFI SMVADSMRYLGVTLALDCVAYTMVQHLCQTNRSFVSDSGLTLERWVSNLA TFAGLLHRKHGETDCKPLFSWIVRALAEGGEPAMAAGKVLREVLHQAGGV QVLDGWSITQAQVDGKGGGEVLRQENASFGSTVKPVRKAKNFLQDGMEKA GASLPLLILPAHQAEALLYEGGSLDDQMRGKPQPHLKVLGHRSDETHTTL LQAVEFVCSKLWVRNKCPTIETLLTKYSLEPRVVFHIWRPVINESLMKHW FPKTGAK back to top mRNA from alignment at M-pyrifera_M_contig7242:3477..12048+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7242.17219.1 ID=mRNA_M-pyrifera_M_contig7242.17219.1|Name=mRNA_M-pyrifera_M_contig7242.17219.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8572bp|location=Sequence derived from alignment at M-pyrifera_M_contig7242:3477..12048+ (Macrocystis pyrifera P11B4 male)ACCGTTCAGACCCTCTCCAAGACGGCCTCCTCCCGTAGCAACTCCAGCGC
TGTCAACGCCAACCTCGCTCCGGCGGCGGTGGCGGCGCGGGTGGTGCCTA
CGCCGGACCTGAAACATATGCAGCGTCTCTCGGGATACGGGTCCGGCTTT
GCGACGACGGATAAGCTTTCTGAGGCTGTGGGTGTGCTGGCCCCTTTGCT
GAAAGCTTTCGGTGCCCATCTCGGCAGGGATCCCATCAT GTTTGCTCAGG
CGAGATAGCTGACTGAACTGCCGACTCTTGCCGTGTTGCCGTGGTGTTTT
GGCCATACCTGGTATAAGAGCTTACCATGTACCAGTACCAGGTACCAGTC
TTTCACTAAATGTAAGTAGTGTTTTTTTTTTATGTAATCCAAGCGGTTCT
TTTATGTGGGGGCAGTGGTATTCGATAAAATGGTTGACACGTTGTGTAAG
GGACAAAGGGACTACTGCTATTACGGGGGTCCATAGTTAACAGGACCTAT
GGTGTACATAAAAACCTATATATTTGCCTATTTTTACTAACAAAATTTGG
TCCCGTTAACTATGGACCCCCGTAATAGTGCTAGCTATTACGCAGGACCA
TAGTTGATAGGATTTTGTTACTGAAAATACGTAAATATATAGGTTTTTGT
GTGTACCGTAGGTCCTATTTACTATGGCCCCCCGTAATAGTGGTTGATTG
CATCTGATTGGCTTGGGGTCAGGGTTAGGGTTGGGTATATCCGCCGCGTA
CACATGTGTCAAGCCATTTTTTTCGGATAAGTGCTTGAGCTATTTTCGT G
TTTTGGTGATGGTTTGGCACGTTTTGGAAAACAAGGGCCGCCGATGCTGT
CTGTTGTCTGGAGATTCACTTGTGTTTGGAAATAAACACCGCTGTCTATT
CGGATTTGTGAGGACTGTTTGTAATGGTAACACGTCGTCACAAAAAGAAC
ACTCCTGATGTGGTAAAAGCCCACTGATATCACCACAGTAGCAGCAACGA
TAGCAGCATCATCATCAGCTGCGGTGCACATGGACGCCAACCTCGCAAAC
CCTCCCTCTCGTTGCCTGCGCGTTCGTTTCTTGTGTGACTGTGACGGCCT
CGGTACGGTACATGGCACTCTACGGCATGCGGTACTCTACGATGTTTGGC
GCGGTGCTCCTGCTCGGGATATGGTGCGGTACGGTACGTTTATGCGATAT
GTTACGGGCACGGTACGGTGCCGTGCACCCCACGCAAACAGGTTTGCCGC
GTCCTTGCCGCGGTTAACTCGCGGAACCCCATCCCCTCGGCTGGCAAGTC
TAAGACCAGCGGCAGCCGCGGCACCAGCAACAGTAGTAGCGCAGCTGCTA
GGGAAAAATCCAACGGCAATGCCGCTGTGTCCGTTGACGACAAAGATCCG
TTGAAAGCGTTTCACTCGCTTTTCGGGCTCTCTCCGATGGAGGCGAAGGA
GGTGTACCGGCGTGGGGAGGCGGAGGCGGGTGCTGGGGGGGAGGGGGGGG
CGAAGGCTGTGAGTAGGGAATTGGACAGGAGGAAGGCGGCGTACATCCGG
GTAGTTTTGACGGTGGCCCCTTCTTTGGGGATGACGCACGCCAACCCTGG
GATGCAGGGAGAG GTGAGGTTGTTTCTTTGCTCGGTTTTGATTGTCTTGC
ATTGCCTTGCCTTGCCTTGTGCCTTGCCTTGCGCCTTGCCTTGCGCCTTG
CCTTGCGCCTTGCCTTGCCTCGCTTGACTTTGCGTGGCTTGTTTTTGCCT
CGCTTGACTTGAGCTGACTTTGCGTGGCGTTGTTTTTCGGTGGTCTGTTT
CCTCACGCTCTTTCAGTTTGTTCCCTTTTATGTTACAGTACTCGTCGGAA
TGTAACAGGTCAAAGAACCTCCCAACGAGTGAGGAAGTGGTGACTGCAGA
TTCTGAATTGCTTCGTATTTTGTTTTTGATTTCGCTTTTGAGTTGAATTT
CATTTGGTTTTCCTTTGATTCTGATTTCCTGCGTGGTCGAGTGAATCATA
CAACCTCCCTGTAAACAAAGTTGTTTCTGGAGTGCCTCGCAACGCACTTC
GGGGGGTTGTGTCCTCGTCTTCTGTCTTCTGTCTTTTCTGACTTTTGTCG
AATTGGTCGTCTTTTTTTTGCTGTTGTCGTTATCTTCACCTCCTGGTTTC
GTTTTATCGAACGATTTTTTAGTTCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCACCCAAACAACACCCGCAATACACCCCAAAAACACCCAAC
ATCTGCCCCCCCCACGCCCGGCGCACCGCNNNNNNNNNNTTTTTTTTTTG
TCTTTTGTGGAATTGGTTGTCTTTTTTTTGCTGTTGTGTTTTTTTTCCCC
TCCTTGTTTTTTTTTTTCAGACGTTTTTTTTGTTCCCCCCCCCCCCCCCC
CCCCCCCCCCTGGCAAGGTGTGGCAAATGCTGGCAGAGCTGCCTTACGAG
GACCGTTTCATGCTGTACGGCGCGTGGAGGGGCCACGGCATGGAGAAGCA
CGCCTTGGGGGTCAAGCACGCGCAGTACGCAGTCGCGGAG GTCAGTCAAG
TCAAGCCAAGCCAAGTCTTCTGTTGCAGTAGCTGCTTGCTGTCGTGCAGT
ATATAGCCGCTTGCTGTTGTGCAGTAGCCGCCGGATGTGTGTTGCAGAGT
ACCTGGTAAGCAGCAGCGTTTGTTTTGATTTTGTAAAAAAAGAGTATTAT
ATGGTTGTAATATTGGTTTCGATTTTTCGACATTTTGACGTTGTGTGATA
TTTTTTTTTCATACCTTTGCGTGGAAAAGCACACCTTGATATTCAACCAC
GCGCAGCACGCAGTCGGCGAGGTTGGTCACGCTAAGTCTACTGTTGTACA
GAATAGCCGCGGAATGGATTGTTGTATGCCTGGTCAGTAAGATGATATGC
ATCTAGGACGACGTCTGTTTTGGTCTGTGTGGCTTTAATTATTGTTTCCG
TTCCTTGTATTGTGCGAGTGTTTGATATTTCGATTTGTCTTCATTCCGAA
AAGTTTTGTTGTTTGACAAAGTTTGATACATTTATGATACCTTTGCGTAG
AGAGGACCACGCCTGAGAGGTGAATTGTGTACCCGCTGTACGCAGTCGCT
GAGGGTCGGTGAAGCCAAGTCAAGTATGCTGCTGCAGCCGAAAATGCGGA
CCGAAAAAAATATGACCGAAAAACTACGACGATTTTTTTTGTTACCGATT
CGTTTTACGGTAATCAAGACCGAAAAGTCATGACGGAAAAGTACAACCCA
ACAAAAAACGACGAAATTTCAAGTATGCTGCTGTAGCCGAAAATGCGGAC
CGAAAAAAATTATGACCGAAAATTTGTGACGATTTTTTTTTTTTAACCGA
TTCGTTTTACGATAATCGAGACCGAAAAATCATGACGGAAAGGTACAACC
CAACAGAAAACGACGAAATTTTACGTAGCGTCCTGTCGTTGTGCGAGTAT
TCAAGAGCATCGTGCATCATGCCGTGTGTGTGTGTTTGACAAGAGCGTAT
CGTATGCACATGACGAAGTCAATGACGATGTTGCCCGCGGAGCAGATTTC
TGCGGGGGCGGATATTTCTCGTCTGATCAAGATGCTGACGTCGGACAACG
TCAAGGACATGGCCCGCAAGCTCGGAAAGCCTTCGCACGCCCACCCTCTA
CTCTTCGCCGAAAAGGTTCTCAACCAGCTGGAAAG GTGATCTGTTATTTT
GTGTGTAGCTTGTTTTTCAGTAGGGTGTATATGCGGGGCGTGTCGAAGCG
ATTACCTAAGTATGAAGGTTAGCAGGGGAAGATAGGTACGTTATTGTGAA
CTATGTCAGGTGTATAGACTTACAGTAGTCTACCAGACAAGTTGATACTT
CAGTATGTTGTCGTGGAGGCGCCGGCGTTTTTATGTCCTGGTGCTCGTTT
TGTTATGTTTTATTTTGTTTTGCAGTTTTGTTGTTTTTCACTAGGTGTTG
TTTCGTTTTCTTTGCTGCTGCCCTCTTTCCGACAGAAATGTAGTTGTGCT
GATGTTTGGGTTTGTATTGTTCTCGTTTTGTGTTTGTTTTCGTTTTTGGG
CTTCTTGTTCGTGTTGTAGTTTGCTTTTGCTTTTCTTTTGTAGTGTCCTT
TGTCCGTGTAGGTATATATCTAAAATTTTGTTTTTGGTCTTGTTGACCGC
CAGCTACGTACGACGACGTTATCGGTTCGTTTTGTTTTTTTATTCTGACG
CCCTTCTCTTTTGTGTGACTGTCTGCCTGCCTGTCTGGTCTGTCTCCCTG
CCTTTGTCTGCTCTGTCTGTCTATCTGTCTGTCTGTCTGTCTGTCTGTCT
GTCTGTTTGTCTGTTTGTCTGTTTGTCTGTCTGTCTGTCTGTCTGTCTGT
CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCCCTGCCTGTGT
GTCTGCTCTGTATATGTCTGCCTGCCTGCCTGCCTGCCTGCCTTGGGTCT
TATTTTCGCTTGCAGTTACGACAATTTTATCTCCATGGTGGCAGACAGCA
TGAGATATCTCGGGGTCACTCTCGCGCTCGATTGCGTGGCGTACACTATG
GTGCAGCACCTCTGCCAAACCAACCGGAGCTTCGTCAGCGACAGCGGTCT
CACCTTGGAAAG GTAAGCAATTATTGTTGCCGGTATCGATATCGAAGTCG
GTATCGATATAGTTATATCGGTATCGATTATCGATATCGGCATCTATACC
GGTGCCTGTAGTAGCGACAGCAGTCTCACCTTCGAGAGGTTTGCAGCTGT
TCATGTTATCGATATCGTTATTATGTTGTTGCCTTTGCTTAGCTTGGCTT
TCCTTGCTTTGCCTTGCCGTTGGCTTTGCCTTGCCTCGGCAGGTCGCATG
TACAGTAGCATCTCACCACGTGTGACCTTTTTTTTATCCAGATGGGTGAG
CAACTTGGCGACGTTCGCCGGCCTGCTGCACCGCAAGCACGGCGAGACGG
ACTGCAAGCCTCTCTTCTCATGGATCGTCAGAGCGCTGGCAGAGGGGGGC
GAACCGGCGATGGCGGCCGGCAAG GTACGTATATGTTTTTTTGCGTGTCT
GCGCACACATGTGCTGTATGAGCGGTATATTTCATGCTCGGTACTTTTTA
TGCACAGCGTATAGCACGCGAGGCATTTTGTGTGCCCGGTGTGTTATCTG
AGCGGTCCGTGTGGCAGTCTCGGAGGGGGGGTCAACCCGCGATGGCGGCC
AGCAAGGTGTGCGTTTGTTTGTGGCGTATGCGTGGTGTTTTTATCCGCAG
CGTTTTGTATGCGCGGTGTGTGTTGCAGTCTGTGAGGGGAGCGAACCCGC
GATGGCGGCTTGTCTCTGTGCAGGGCTGTGCGTGCGGTTCGGTTCTCTGC
CACAACACGGTGTGTCCTATTGACCCGTTTGAGACTTGATATACAGCGTA
CAGCATGGAGGAAGCTTATGACGAAACGCAACGACGGTTACACCATCGGC
ATTTGCTTCTGTTGGGGGGGTGATACGTTTCGGGCCTGCATGTGATAGCG
TATATCCTGCTGCGCAATTTCCTAGCGCCAGCCATGCTATCTCACTATCC
TTGATTCCACGCCTTACAGGTACTTCGCGAAGTTTTGCACCAGGCTGGAG
GCGTGCAGGTTCTGGACGGGTGGAGCATCACGCAGGCCCAGGTGGACGGC
AAGGGCGGCGGAGAGGTTTTGAGGCAGGAGAACGCTAGCTTCGGGTCTAC
CGTCAAGCCAGTCCGGAAGGCTAAAAACTTTCTTCAG GTGTGTTTATCAT
TCGTATCGTTGTGTCTTGCGATGAAAGTGAAGCGTCCCGATGGGTACGAT
TTCTGTCTTGGGCAGCATGGTTTCTTGCTTTATTGTGTTTTCTTCTTCGA
AAGCAGCGTCCCCAAGGCTTGTGAGAACTTTTTCATGTACCAGGTAGGTG
ATTTATTTTTCTTGTTCTTATTTTCTAGTGTGAAAGAAGCCTCCGACAGC
CCGTTTTGTCTCGCTGTACTTAAATATAGGTTCCCAAAGGGATAAACAAA
AACTCGGCATTTTCTACCGGGTACCGGGTAGGTACCGTGTGTAGTGATAT
TTTTCCGAGTTTTGTGTATATATTATTTTTTTCTCGTTTCGTTTTTTCGA
TAATTCGTGTGTGCAGTTAACAATCTGTGTATCTGGTATTTGATATCAGC
TGTACCAGGTGGTGCGTGAAACGCGATTTTACACTCGGTTGTATTTTTAT
TGTTCACTGGTGCAATGTCAGCGATTCGATTTTTTGTTCCGAGTGTCTTA
CGTCGTGATCTTCTGATTCATGTCATTTTTTTCTCCACTCCATAATTTTT
GGAGCCTGCCTCGTGACCACAGAATTTATTGTGACGAACACCAGACCACA
CTAGCAGCTACAGCAACTATTACGGGGGGCCATAGTAAATAGGACCAAAT
GGTGGTAGTAAAAATTGGTAAATGTATAGGTTTTTGTGTGTATCGTAGGT
CCTATTTACTATGGTCCTCCGTAGAACCCAAAACCCACCAACAACAACCA
GAGCAGCAGCAACTACACCAGCACCAATAAGAGCAACGGAGACAACAACC
AATACCCCACAACCAACAACAACAGCAGCAGTGATATGATATACCGCATA
TTAATAGTACGTATGCTTTTTTTTGCACCGATATAATACCTGGTATGCGT
TTGTGATTTGTAACAGGACGGCATGGAAAAGGCGGGGGCGTCGCTGCCGC
TGTTGATTCTCCCCGCGCACCAAGCGGAGGCTTTATTATACGAGGGGGGA
TCTCTGGATGATCAGATGAGGGGCAAGCCGCAGCCGCATCTCAAG GTCAG
AGCGGGTTCCTGCGTCGGTTCTTGGAACGGTCCTTGGAATAGTACGGGTA
TATCATTATGGACGGAAATATAAGGGACGTTGGGTTATAAATATGAGGAC
CAAACGGTTCTTGCTTTTTCGTTCACGGTGGTATAAAATGCCGTTAAGTA
GGGGTACGTAGGAGGTAGGACTACAGTAGGCTTGAAGAAAGCCGTCAACC
GAAGGAACAGCGTGTGCTTAAAAGTTGATACGCTTTTTTTCTTTTTACCG
CTTTCGTTGGCTGTTTTTTTTAGTCCGTTGGCTGGTATTTTTGTGAACTT
CGTCACAAAGGAACTTGGGTAAACAAGCGTACGAAGCGAAATACCATGGT
GTTGTTCACATAAAAAACGGAGGCGCCTCGAGTATCAACAGTGGGTGCTC
TGGATCGAGTGCAGTTGCTGCGAGTGCTCGCAGCTTGTTGTGTTGTGGCC
CTGTACAAGTCCTGCAGGACTGTCGTAAGCGCTGTGAGTTGGCTTTTTGG
AATGCAGTCCCTTTTTTGAGACAAACCACTGAACCTCTAAGTATCGTGTC
CCCATAACAGGACTGAAGTTTGCCCTATTACGGAGGGCCATAGTAAATAG
GACCAAATATCGTTGGTAAAAATAGGTAAATATATAGGTTTTTGTTTGTA
CCGTAGGACTTATTTACTATGGCCCCCGGTATTACCTGTCGTGGTTCCCA
TTCCTCATTGCTTAGATGGAGTTTCGACGCACCCCGGCCTCTTAAGTCGT
GCTGTAATCTGTCGTATATTTTTCTGTCCTGCGCTGCCCTGCCCTGCCCT
GTCCTGTCCTGTCCTGTCCTGCCCTGCCCTGTCCTGCCTTGTCCTGTCTG
TTTTATTTTTGTTGCCTATTGGTGTTGATAGGTGCTGGGTCACCGATCAG
ACGAGACCCACACGACTCTGCTGCAAGCCGTCGAGTTCGTGTGCTCCAAG
CTGTGGGTCAGAAACAAGTGCCCGACCATCGAGACCCTG GTATGAGATAT
ACGGCAGTGCTTACGTTGTTCATATATACCTATTTGTAGACTTTTTGTGC
TCACGCGTGATTCTTGTACTGTTCATTTTTATCGTAATTTATATGCATCG
TGCTCACGTTTTTCTAGCGGCTCCATTGCATTGTGTCGGTTGTGTTCCAG
CTCAGGATTGTCCCAACGGCTCTATTGCATGATGCCGTTGTATATAATAC
GTTGTGCTACAGCTCAGGATTGTCCCACCGACTGTGTATTGCATGACGGT
CGTTGCGCTTCATCTCACGATTACCTCAACGGCTCTATTGCATCATGACA
AGTAGCGACGCCAACGACTCTATTGCATTTTGGCCGTTGCACTTCAACTT
ACGATTGTGCAACAACTCTTTGCATGCCGGCCTTTGCTCGTCATTTCACG
GCTGTCCCAACGGCTCTGTTGCAATGTAATCGTTGCACCTCACCTCATGT
TTGTTCCAACGGTTCATCGTTTTGCATTGCGCTACAAGTCACTAATTCCC
AACCACTCTATTACACTATGGCCTTTTCTCGTCAACTCGTCAACCGACGT
TTGTCCCATGACTATGTTGCATTGATGTCGATTGTGCTTCATACATTATA
TAGTGGATACGGGTAAACTCGTGATCGTCCCAACGGCTCTGTTCGCTGAT
GACTGTTGCTCTTCGTTCAGCTGACGAAGTACAGCTTGGAGCCGAGAGTG
GTGTTCCACATCTGGCGACCGGTGATCAACGAGAGCCTCATGAAGCACTG
GTTCCCCAAAACGGGCGCGAAG back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7242:3477..12048+
>mRNA_M-pyrifera_M_contig7242.17219.1 ID=mRNA_M-pyrifera_M_contig7242.17219.1|Name=mRNA_M-pyrifera_M_contig7242.17219.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3342bp|location=Sequence derived from alignment at M-pyrifera_M_contig7242:3477..12048+ (Macrocystis pyrifera P11B4 male) ACCGTTCAGACCCTCTCCAAGACGGCCTCCTCCCGTAGCAACTCCAGCGC TGTCAACGCCAACCTCGCTCCGGCGGCGGTGGCGGCGCGGGTGGTGCCTA CGCCGGACCTGAAACATATGCAGCGTCTCTCGGGATACGGGTCCGGCTTT GCGACGACGGATAAGCTTTCTGAGGCTGTGGGTGTGCTGGCCCCTTTGCT GAAAGCTTTCGGTGCCCATCTCGGCAGGGATCCCATCATACCGTTCAGAC CCTCTCCAAGACGGCCTCCTCCCGTAGCAACTCCAGCGCTGTCAACGCCA ACCTCGCTCCGGCGGCGGTGGCGGCGCGGGTGGTGCCTACGCCGGACCTG AAACATATGCAGCGTCTCTCGGGATACGGGTCCGGCTTTGCGACGACGGA TAAGCTTTCTGAGGCTGTGGGTGTGCTGGCCCCTTTGCTGAAAGCTTTCG GTGCCCATCTCGGCAGGGATCCCATCATCTATTTTCGTCTATTTTCGTGT TTGCCGCGTCCTTGCCGCGGTTAACTCGCGGAACCCCATCCCCTCGGCTG GCAAGTCTAAGACCAGCGGCAGCCGCGGCACCAGCAACAGTAGTAGCGCA GCTGCTAGGGAAAAATCCAACGGCAATGCCGCTGTGTCCGTTGACGACAA AGATCCGTTGAAAGCGTTTCACTCGCTTTTCGGGCTCTCTCCGATGGAGG CGAAGGAGGTGTACCGGCGTGGGGAGGCGGAGGCGGGTGCTGGGGGGGAG GGGGGGGCGAAGGCTGTGAGTAGGGAATTGGACAGGAGGAAGGCGGCGTA CATCCGGGTAGTTTTGACGGTGGCCCCTTCTTTGGGGATGACGCACGCCA ACCCTGGGATGCAGGGAGAGGTTTGCCGCGTCCTTGCCGCGGTTAACTCG CGGAACCCCATCCCCTCGGCTGGCAAGTCTAAGACCAGCGGCAGCCGCGG CACCAGCAACAGTAGTAGCGCAGCTGCTAGGGAAAAATCCAACGGCAATG CCGCTGTGTCCGTTGACGACAAAGATCCGTTGAAAGCGTTTCACTCGCTT TTCGGGCTCTCTCCGATGGAGGCGAAGGAGGTGTACCGGCGTGGGGAGGC GGAGGCGGGTGCTGGGGGGGAGGGGGGGGCGAAGGCTGTGAGTAGGGAAT TGGACAGGAGGAAGGCGGCGTACATCCGGGTAGTTTTGACGGTGGCCCCT TCTTTGGGGATGACGCACGCCAACCCTGGGATGCAGGGAGAGGTGTGGCA AATGCTGGCAGAGCTGCCTTACGAGGACCGTTTCATGCTGTACGGCGCGT GGAGGGGCCACGGCATGGAGAAGCACGCCTTGGGGGTCAAGCACGCGCAG TACGCAGTCGCGGAGGTGTGGCAAATGCTGGCAGAGCTGCCTTACGAGGA CCGTTTCATGCTGTACGGCGCGTGGAGGGGCCACGGCATGGAGAAGCACG CCTTGGGGGTCAAGCACGCGCAGTACGCAGTCGCGGAGATTTCTGCGGGG GCGGATATTTCTCGTCTGATCAAGATGCTGACGTCGGACAACGTCAAGGA CATGGCCCGCAAGCTCGGAAAGCCTTCGCACGCCCACCCTCTACTCTTCG CCGAAAAGGTTCTCAACCAGCTGGAAAGATTTCTGCGGGGGCGGATATTT CTCGTCTGATCAAGATGCTGACGTCGGACAACGTCAAGGACATGGCCCGC AAGCTCGGAAAGCCTTCGCACGCCCACCCTCTACTCTTCGCCGAAAAGGT TCTCAACCAGCTGGAAAGTTACGACAATTTTATCTCCATGGTGGCAGACA GCATGAGATATCTCGGGGTCACTCTCGCGCTCGATTGCGTGGCGTACACT ATGGTGCAGCACCTCTGCCAAACCAACCGGAGCTTCGTCAGCGACAGCGG TCTCACCTTGGAAAGTTACGACAATTTTATCTCCATGGTGGCAGACAGCA TGAGATATCTCGGGGTCACTCTCGCGCTCGATTGCGTGGCGTACACTATG GTGCAGCACCTCTGCCAAACCAACCGGAGCTTCGTCAGCGACAGCGGTCT CACCTTGGAAAGATGGGTGAGCAACTTGGCGACGTTCGCCGGCCTGCTGC ACCGCAAGCACGGCGAGACGGACTGCAAGCCTCTCTTCTCATGGATCGTC AGAGCGCTGGCAGAGGGGGGCGAACCGGCGATGGCGGCCGGCAAGATGGG TGAGCAACTTGGCGACGTTCGCCGGCCTGCTGCACCGCAAGCACGGCGAG ACGGACTGCAAGCCTCTCTTCTCATGGATCGTCAGAGCGCTGGCAGAGGG GGGCGAACCGGCGATGGCGGCCGGCAAGGTACTTCGCGAAGTTTTGCACC AGGCTGGAGGCGTGCAGGTTCTGGACGGGTGGAGCATCACGCAGGCCCAG GTGGACGGCAAGGGCGGCGGAGAGGTTTTGAGGCAGGAGAACGCTAGCTT CGGGTCTACCGTCAAGCCAGTCCGGAAGGCTAAAAACTTTCTTCAGGTAC TTCGCGAAGTTTTGCACCAGGCTGGAGGCGTGCAGGTTCTGGACGGGTGG AGCATCACGCAGGCCCAGGTGGACGGCAAGGGCGGCGGAGAGGTTTTGAG GCAGGAGAACGCTAGCTTCGGGTCTACCGTCAAGCCAGTCCGGAAGGCTA AAAACTTTCTTCAGGACGGCATGGAAAAGGCGGGGGCGTCGCTGCCGCTG TTGATTCTCCCCGCGCACCAAGCGGAGGCTTTATTATACGAGGGGGGATC TCTGGATGATCAGATGAGGGGCAAGCCGCAGCCGCATCTCAAGGACGGCA TGGAAAAGGCGGGGGCGTCGCTGCCGCTGTTGATTCTCCCCGCGCACCAA GCGGAGGCTTTATTATACGAGGGGGGATCTCTGGATGATCAGATGAGGGG CAAGCCGCAGCCGCATCTCAAGGTGCTGGGTCACCGATCAGACGAGACCC ACACGACTCTGCTGCAAGCCGTCGAGTTCGTGTGCTCCAAGCTGTGGGTC AGAAACAAGTGCCCGACCATCGAGACCCTGGTGCTGGGTCACCGATCAGA CGAGACCCACACGACTCTGCTGCAAGCCGTCGAGTTCGTGTGCTCCAAGC TGTGGGTCAGAAACAAGTGCCCGACCATCGAGACCCTGCTGACGAAGTAC AGCTTGGAGCCGAGAGTGGTGTTCCACATCTGGCGACCGGTGATCAACGA GAGCCTCATGAAGCACTGGTTCCCCAAAACGGGCGCGAAGCTGACGAAGT ACAGCTTGGAGCCGAGAGTGGTGTTCCACATCTGGCGACCGGTGATCAAC GAGAGCCTCATGAAGCACTGGTTCCCCAAAACGGGCGCGAAG back to top