mRNA_M-pyrifera_M_contig71577.17061.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig71577.17061.1
Unique NamemRNA_M-pyrifera_M_contig71577.17061.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A7S2WQX7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WQX7_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.090e-37
Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = 1
Query:   28 TFQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            +F   LLDLC+ A+ I  KE+RVLE+SSP YVFGD HG+ E+L+  A ++WP+GM LSAG FLFLGDY DRG + +ELVAY+L  K Q P+KV+++RGNHETR  NG +G+
Sbjct:  207 SFAEQLLDLCDRASAILQKEARVLEISSPCYVFGDFHGNFEDLQFFAEHIWPMGMRLSAGSFLFLGDYVDRGVHGLELVAYLLTQKTQLPDKVFLIRGNHETRAVNGWEGY 317          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A7S1U0A8_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0A8_9STRA)

HSP 1 Score: 127 bits (319), Expect = 4.970e-35
Identity = 57/110 (51.82%), Postives = 78/110 (70.91%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F   ++ L    + I+ +E R L L SP+YVFGD HG++E+L     N+W +GM L+AG+FLFLGDY DRG + +E  AY+ ALK+ +PEK++MLRGNHETR  NG +GH
Sbjct:   43 FAEDIMTLATRVSTIYEEELRCLFLQSPVYVFGDIHGNLEDLNFFGDNIWNLGMRLTAGKFLFLGDYVDRGLSGLETTAYLFALKVLYPEKIFMLRGNHETRDVNGWEGH 152          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A2R5GL52_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL52_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.770e-35
Identity = 62/110 (56.36%), Postives = 85/110 (77.27%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F + +L LC  A  IF +E RVLEL+SP+YVFGD HG++E+L+  A +VWP+G  LSAG+ LFLGDY DRG + +E++AY+LA K+Q P+KV+M+RGNHETR  NG + +
Sbjct:  378 FANDILALCTRACKIFPREKRVLELASPLYVFGDLHGNLEDLQFFAEHVWPMGARLSAGKLLFLGDYVDRGEHGLEVLAYLLAQKVQVPDKVFMIRGNHETRAVNGWEAY 487          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A7S2WM62_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM62_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.660e-33
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1
Query:   43 LLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            +L LC  A  +F  ESR L L SP +VFGDTHG++E+L   + N+W +GM L  G+FLFLGDY DRG +S+E+V Y++ALKI FP KV+MLRGNHETR  NG + H
Sbjct:  213 ILRLCEKAKHVFEAESRCLYLESPTFVFGDTHGNLEDLHFFSDNIWRLGMNLHPGRFLFLGDYVDRGLSSLEVVTYLIALKILFPHKVFMLRGNHETRDVNGWEEH 318          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A7S4E980_9STRA (Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E980_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.700e-33
Identity = 61/110 (55.45%), Postives = 80/110 (72.73%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F   +L+L   A   F +E RVL L SP YVFGDTHG++E+L   + ++W +G+ L+AGQ LFLGDY DRG +S+E+VAY+LALK   P+KVW+LRGNHETR  NG + H
Sbjct:  212 FADDILNLARQAGRRFEREPRVLRLESPAYVFGDTHGNLEDLHFFSDHIWKLGVSLTAGQLLFLGDYVDRGLSSLEVVAYLLALKCLEPQKVWLLRGNHETRDVNGWEEH 321          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A8J9X7B7_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X7B7_PHATR)

HSP 1 Score: 125 bits (314), Expect = 1.190e-32
Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F   LL L +    +  +E RV+ L SP YVFGD HG++E+L   + N+W +GM L+AG FLFLGDY DRG N +E VAY+ A+K+Q P KV+MLRGNHETR  NG + H
Sbjct:    9 FAKDLLKLASKVKQMLEREPRVVFLQSPAYVFGDIHGNLEDLHFFSDNIWRLGMSLTAGNFLFLGDYVDRGLNCLECVAYLFAMKLQLPGKVFMLRGNHETRDVNGWEEH 118          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A7S3LKY1_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKY1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.430e-32
Identity = 52/110 (47.27%), Postives = 82/110 (74.55%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F   L+  C+  + + ++E R+LEL SPIY+FGD HG++++L+  A  +WP+GM L+AG+FLFLGDY DRG   +E+VA+++A K+  P+K++++RGNHETR  NG + +
Sbjct:   23 FAEELIQACHRVSGVLSREERLLELRSPIYIFGDLHGNLDDLKFFADLIWPLGMQLTAGKFLFLGDYVDRGQYGIEVVAFLVAQKLLIPDKIFLIRGNHETRAVNGWESY 132          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A482UWC4_9ARCH (SER_THR_PHOSPHATASE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UWC4_9ARCH)

HSP 1 Score: 123 bits (308), Expect = 4.410e-32
Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F   L+ +C A  +   ++ R + L SP+YVFGD HG++E+L   A N+W +GM LSAG FLFLGDY DRG + +E VAY+  LK+ +P K+ +LRGNHETR  NG + H
Sbjct:  161 FAQDLVTVCRAVTETLEQQPRCVFLQSPVYVFGDIHGNLEDLHFFADNLWKLGMDLSAGHFLFLGDYVDRGMSCLECVAYLFGLKLLYPHKITLLRGNHETRDVNGWEAH 270          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A448Z563_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z563_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.580e-32
Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F + L  LC     I  +E RV+ L SP Y+FGD HG++E+L   + N+W +GM L+AG FLFLGDY DRG N + +VAY+LA+K+Q P+KV++LRGNHETR  NG + H
Sbjct:  145 FATDLFKLCQKVRQILEREPRVVYLQSPCYIFGDIHGNLEDLHFFSDNIWRLGMNLTAGNFLFLGDYVDRGMNCLAVVAYLLAMKLQNPQKVFLLRGNHETRDVNGWEEH 254          
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Match: A0A1V9YIX1_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIX1_9STRA)

HSP 1 Score: 127 bits (319), Expect = 4.910e-32
Identity = 61/110 (55.45%), Postives = 78/110 (70.91%), Query Frame = 1
Query:   31 FQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSMENLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPEKVWMLRGNHETRQQNGTDGH 360
            F + LL L   AA IF  E+R + L SP+YVFGD HG++ +L+  + N+W +GMGL+AG FLFLGDY DRG +S+E VAY+ A KI  P KV +LRGNHETR  NG + H
Sbjct:  149 FNTDLLALAQQAATIFENEARCVALESPVYVFGDIHGNLADLKFFSENLWRLGMGLTAGSFLFLGDYVDRGLSSLECVAYLFAQKIMHPNKVVLLRGNHETRAVNGWEEH 258          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71577.17061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2WQX7_9STRA1.090e-3759.46Serine/threonine-protein phosphatase n=1 Tax=labyr... [more]
A0A7S1U0A8_9STRA4.970e-3551.82Serine/threonine-protein phosphatase (Fragment) n=... [more]
A0A2R5GL52_9STRA7.770e-3556.36Serine/threonine-protein phosphatase n=1 Tax=Honda... [more]
A0A7S2WM62_9STRA1.660e-3357.55Serine/threonine-protein phosphatase n=1 Tax=Rhizo... [more]
A0A7S4E980_9STRA3.700e-3355.45Serine/threonine-protein phosphatase (Fragment) n=... [more]
A0A8J9X7B7_PHATR1.190e-3253.64Hypothetical protein (Fragment) n=2 Tax=Phaeodacty... [more]
A0A7S3LKY1_9STRA3.430e-3247.27Serine/threonine-protein phosphatase n=1 Tax=Aplan... [more]
A0A482UWC4_9ARCH4.410e-3250.00SER_THR_PHOSPHATASE domain-containing protein n=1 ... [more]
A0A448Z563_9STRA4.580e-3252.73Serine/threonine-protein phosphatase n=1 Tax=Pseud... [more]
A0A1V9YIX1_9STRA4.910e-3255.45Serine/threonine-protein phosphatase n=1 Tax=Achly... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig71577contigM-pyrifera_M_contig71577:16..375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score125.9
Seed ortholog evalue1.2e-26
Seed eggNOG ortholog112098.XP_008605663.1
KEGG koko:K01090
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG0639@1,KOG0374@2759
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size360
Cds size360
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816611.0305831-CDS-M-pyrifera_M_contig71577:15..3751622816611.0305831-CDS-M-pyrifera_M_contig71577:15..375Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71577 16..375 -
1692278076.5065546-CDS-M-pyrifera_M_contig71577:15..3751692278076.5065546-CDS-M-pyrifera_M_contig71577:15..375Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig71577 16..375 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig71577.17061.1prot_M-pyrifera_M_contig71577.17061.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig71577 16..375 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig71577.17061.1

>prot_M-pyrifera_M_contig71577.17061.1 ID=prot_M-pyrifera_M_contig71577.17061.1|Name=mRNA_M-pyrifera_M_contig71577.17061.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MVVPRRLRPTFQSLLLDLCNAAADIFAKESRVLELSSPIYVFGDTHGSME
NLRRLAANVWPIGMGLSAGQFLFLGDYCDRGPNSVELVAYMLALKIQFPE
KVWMLRGNHETRQQNGTDGH
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mRNA from alignment at M-pyrifera_M_contig71577:16..375-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig71577.17061.1 ID=mRNA_M-pyrifera_M_contig71577.17061.1|Name=mRNA_M-pyrifera_M_contig71577.17061.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=360bp|location=Sequence derived from alignment at M-pyrifera_M_contig71577:16..375- (Macrocystis pyrifera P11B4 male)
ATGGTGGTGCCTCGTCGTCTTCGCCCCACCTTCCAGTCCCTCCTCCTCGA CCTGTGCAATGCTGCTGCCGACATCTTCGCCAAGGAGAGCAGAGTGCTTG AGCTTTCCTCCCCGATTTACGTGTTTGGAGACACACACGGGTCGATGGAG AATCTGAGGCGTCTTGCAGCCAACGTCTGGCCGATTGGGATGGGTTTGAG TGCTGGTCAGTTTTTGTTCCTGGGAGATTACTGCGACAGAGGACCGAATT CAGTGGAGCTCGTGGCATACATGCTGGCTCTCAAGATCCAGTTTCCCGAA AAAGTGTGGATGCTGCGTGGCAACCACGAGACGAGGCAGCAAAATGGGAC GGACGGACAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig71577:16..375-

>mRNA_M-pyrifera_M_contig71577.17061.1 ID=mRNA_M-pyrifera_M_contig71577.17061.1|Name=mRNA_M-pyrifera_M_contig71577.17061.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig71577:16..375- (Macrocystis pyrifera P11B4 male)
ATGGTGGTGCCTCGTCGTCTTCGCCCCACCTTCCAGTCCCTCCTCCTCGA
CCTGTGCAATGCTGCTGCCGACATCTTCGCCAAGGAGAGCAGAGTGCTTG
AGCTTTCCTCCCCGATTTACGTGTTTGGAGACACACACGGGTCGATGGAG
AATCTGAGGCGTCTTGCAGCCAACGTCTGGCCGATTGGGATGGGTTTGAG
TGCTGGTCAGTTTTTGTTCCTGGGAGATTACTGCGACAGAGGACCGAATT
CAGTGGAGCTCGTGGCATACATGCTGGCTCTCAAGATCCAGTTTCCCGAA
AAAGTGTGGATGCTGCGTGGCAACCACGAGACGAGGCAGCAAAATGGGAC
GGACGGACACATGGTGGTGCCTCGTCGTCTTCGCCCCACCTTCCAGTCCC
TCCTCCTCGACCTGTGCAATGCTGCTGCCGACATCTTCGCCAAGGAGAGC
AGAGTGCTTGAGCTTTCCTCCCCGATTTACGTGTTTGGAGACACACACGG
GTCGATGGAGAATCTGAGGCGTCTTGCAGCCAACGTCTGGCCGATTGGGA
TGGGTTTGAGTGCTGGTCAGTTTTTGTTCCTGGGAGATTACTGCGACAGA
GGACCGAATTCAGTGGAGCTCGTGGCATACATGCTGGCTCTCAAGATCCA
GTTTCCCGAAAAAGTGTGGATGCTGCGTGGCAACCACGAGACGAGGCAGC
AAAATGGGACGGACGGACAC
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