mRNA_M-pyrifera_M_contig71240.16990.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A517PGF3_9PLAN (DUF4274 domain-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PGF3_9PLAN) HSP 1 Score: 203 bits (517), Expect = 1.300e-64 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 2 Query: 335 MKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDPEPWIQEDDVDLEVLQLPAAMLQAVPGTKRGRR 625 MKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDPEPWIQEDDVDLEVLQLPAAMLQAVPGTKRGRR Sbjct: 1 MKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDPEPWIQEDDVDLEVLQLPAAMLQAVPGTKRGRR 97
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A517PGF8_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PGF8_9PLAN) HSP 1 Score: 199 bits (505), Expect = 9.870e-63 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 Query: 1 MAKAVRKKTKKELAEPAFRKRMSTQAEVLMRAYAECEKLSQKRLQFILDVAENAWFRCFEHKDDNAALEKESRRWAKLRREFIKSVEKPREIHCFTCHLQR 303 MAKAVRKKTKKELAEPAFRKRMSTQAEVLMRAYAECEKLSQKRLQFILDVAENAWFRCFEHKDDNAALEKESRRWAKLRREFIKSVEKPREIHCFTCHLQR Sbjct: 1 MAKAVRKKTKKELAEPAFRKRMSTQAEVLMRAYAECEKLSQKRLQFILDVAENAWFRCFEHKDDNAALEKESRRWAKLRREFIKSVEKPREIHCFTCHLQR 101
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A2E7KHE3_9PLAN (DUF4274 domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KHE3_9PLAN) HSP 1 Score: 198 bits (504), Expect = 4.410e-61 Identity = 95/126 (75.40%), Postives = 105/126 (83.33%), Query Frame = 2 Query: 248 LNPLRSPGKFIASLVTYNADRGLKPLIRLMKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDPEPWIQEDDVDLEVLQLPAAMLQAVPGTKRGRR 625 L + P + YNAD+GLKPLIR+MKHP+CDAGTALRLFW+ DP ++S+Y TISECP EE QDAMRLLRTIKLRFKKNDFQSKK+YFDPEPWI DDVDLEVLQLP MLQAVPGTKRGRR Sbjct: 83 LKTVEKPREIHCFTCHYNADQGLKPLIRMMKHPACDAGTALRLFWLYDPFFYSEYRTISECPDEEMQDAMRLLRTIKLRFKKNDFQSKKIYFDPEPWIPADDVDLEVLQLPETMLQAVPGTKRGRR 208
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A517R8D5_9PLAN (DUF4274 domain-containing protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R8D5_9PLAN) HSP 1 Score: 173 bits (439), Expect = 3.040e-51 Identity = 79/124 (63.71%), Postives = 96/124 (77.42%), Query Frame = 2 Query: 248 LNPLRSPGKFIASLVTYNADRGLKPLIRLMKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDPEPWIQEDDVDLEVLQLPAAMLQAVPGTKRG 619 LN + P + YNAD G+KPLIR+MKHPSCDAG+ALR+FW+ DPVY+SDY TISECP E QD MR+LR IK RFK++DF+++K YFDPEPW+Q D VDLE LQLP AML A+P + RG Sbjct: 83 LNTVEKPREIHCFTCLYNADEGIKPLIRMMKHPSCDAGSALRMFWVYDPVYYSDYRTISECPDNEGQDVMRMLRAIKRRFKQSDFKTRKFYFDPEPWLQADHVDLEALQLPDAMLTAIPKSSRG 206
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A517VWM6_9PLAN (DUF4274 domain-containing protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VWM6_9PLAN) HSP 1 Score: 146 bits (368), Expect = 1.300e-40 Identity = 67/104 (64.42%), Postives = 89/104 (85.58%), Query Frame = 2 Query: 296 YNADRGLKPLIRLMKHPSCDAGTALRLFWINDPV-YFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDPEPWIQEDDVDLEVLQLPAAMLQAVP 604 Y+A G+KPLI+L KHPSCDAGTALRLFW+ +PV Y+S Y+TISEC YEE+QDAMRLL+ I+ RFKK++F++ K+YFDP+PW++ +VDLE L+LP +ML +VP Sbjct: 99 YDASNGMKPLIQLGKHPSCDAGTALRLFWVYEPVFYYSQYATISECAYEEDQDAMRLLKAIERRFKKSNFKTHKIYFDPKPWLEACEVDLESLRLPDSMLVSVP 202
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: UPI00119DD188 (DUF4274 domain-containing protein n=1 Tax=Symmachiella dynata TaxID=2527995 RepID=UPI00119DD188) HSP 1 Score: 106 bits (264), Expect = 7.360e-25 Identity = 43/102 (42.16%), Postives = 74/102 (72.55%), Query Frame = 2 Query: 296 YNADRGLKPLIRLMKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDPEPWIQEDDVDLEVLQLPAAMLQAV 601 +N DRG+ P+++++K+ CDAGTAL L+W DP F ++ T++EC +E+++ R+LRTI+ RFK++DF +K+ FDP PWI++D + + ++PA M + + Sbjct: 108 WNYDRGVSPMLKIVKNEHCDAGTALNLYWRFDPYSFQNHRTLAECQNDEDRETFRILRTIERRFKRDDFATKRFPFDPTPWIEDDLAESAIHKIPAIMREPI 209
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A2E7KH37_9PLAN (Uncharacterized protein n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KH37_9PLAN) HSP 1 Score: 82.0 bits (201), Expect = 4.550e-15 Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 3 Query: 495 MTFSRKRCTLTRSLGSRKMMSTLKFCSCPQPCCRLSLERNAVVD 626 MTFS+KR TLTRS GSR+MMSTLKFCSCP+PCCRLSLERNAVVD Sbjct: 1 MTFSQKRFTLTRSPGSRRMMSTLKFCSCPKPCCRLSLERNAVVD 44
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A3E0PLS0_9BACT (DUF4274 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PLS0_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 6.150e-9 Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 296 YNADRGLKPLIRLMKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDP 529 +N D G L ++KHP CD GTAL ++W+ PVY +DYS I + P E +D R + + ++ FQ ++ FDP Sbjct: 9 FNWDCGCSELEEVVKHPLCDRGTALMIYWLAAPVYCADYSDIDDVP-EVNRDGHRFVSHVLKMLMEHRFQHNRISFDP 85
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A7Y5RTX3_9BACT (DUF4274 domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7Y5RTX3_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 3.920e-8 Identity = 27/78 (34.62%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 296 YNADRGLKPLIRLMKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQDAMRLLRTIKLRFKKNDFQSKKMYFDP 529 YN D G+ P +R+++HP CD GTAL +FW DP Y+ + + + E + L+R + + K+ F++ + FDP Sbjct: 46 YNWDGGIGPKLRVIRHPKCDLGTALLIFWRRDPRYYFEALAVRDAEAIEFLETRPLMRELINKVKRGHFRTARTAFDP 123
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Match: A0A0K1QD01_9DELT (DUF4274 domain-containing protein n=1 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1QD01_9DELT) HSP 1 Score: 52.8 bits (125), Expect = 2.710e-5 Identity = 32/85 (37.65%), Postives = 45/85 (52.94%), Query Frame = 2 Query: 287 LVTYNADRGLKPLIRLMKHPSCDAGTALRLFWINDPVYFSDYSTISECPYEEEQ----DAMRLLRTIKLRFKKNDFQSKKMYFDP 529 L+ YN + G P + L++HP+CD GTAL L+W FSD P + + DA LL + R +NDF S ++ FDP Sbjct: 37 LLHYNVNDGFLPCLALVRHPACDRGTALMLYW-----RFSDCLMEPRDPEQTAKAAAWDAHALLVELGDRLTRNDFASAEICFDP 116 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71240.16990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig71240.16990.1 >prot_M-pyrifera_M_contig71240.16990.1 ID=prot_M-pyrifera_M_contig71240.16990.1|Name=mRNA_M-pyrifera_M_contig71240.16990.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp MRNARSYRKKDFNSYLMWQKMPGSDALNIKMIMLLSRRSLAGGPNCVGSLback to top mRNA from alignment at M-pyrifera_M_contig71240:135..762- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig71240.16990.1 ID=mRNA_M-pyrifera_M_contig71240.16990.1|Name=mRNA_M-pyrifera_M_contig71240.16990.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=628bp|location=Sequence derived from alignment at M-pyrifera_M_contig71240:135..762- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig71240:135..762- >mRNA_M-pyrifera_M_contig71240.16990.1 ID=mRNA_M-pyrifera_M_contig71240.16990.1|Name=mRNA_M-pyrifera_M_contig71240.16990.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig71240:135..762- (Macrocystis pyrifera P11B4 male)back to top |