prot_M-pyrifera_M_contig70959.16936.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70959.16936.1
Unique Nameprot_M-pyrifera_M_contig70959.16936.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: A0A1M3D243_9BACT (DNA-binding response regulator n=1 Tax=Bacteroidetes bacterium 41-46 TaxID=1895922 RepID=A0A1M3D243_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 5.640e-8
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPEAKKET--IVSIDRAMDFKNWLNK 37
            M+AYS+GR+KITL+PE + +T  IVSIDR+ DFK WL+K
Sbjct:  213 MVAYSRGRIKITLKPEFENDTEAIVSIDRSSDFKRWLDK 251          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: UPI00198D2AF9 (Response regulator transcription factor n=1 Tax=Chitinophagales bacterium TaxID=2448779 RepID=UPI00198D2AF9)

HSP 1 Score: 55.1 bits (131), Expect = 7.760e-8
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPEAKKETIVSIDRAMDFKNWLNK 37
            MI+YSK R+KI L+P+  KETIVS++R+  FK WLNK
Sbjct:  214 MISYSKSRVKIELQPQTDKETIVSVERSSAFKEWLNK 250          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: UPI0019B09391 (Response regulator transcription factor n=1 Tax=Fimbriimonadaceae bacterium TaxID=2682144 RepID=UPI0019B09391)

HSP 1 Score: 54.3 bits (129), Expect = 1.490e-7
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPEAKKETIVSIDRAMDFKNWLNK 37
            M+AYSK R+K+ L P   KETIVS++R+ DFK WLNK
Sbjct:  214 MLAYSKSRVKLELIPHTDKETIVSVERSGDFKEWLNK 250          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: UPI00199CC2D2 (Response regulator transcription factor n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI00199CC2D2)

HSP 1 Score: 53.5 bits (127), Expect = 1.790e-7
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPEAKKETIVSIDRAMDFKNWLNK 37
            M+ +++GR+KI L P  K+E IVSI+RA+DFK WLN+
Sbjct:  156 MVVHTRGRVKIELNPPVKEEVIVSIERALDFKGWLNQ 192          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: UPI0003777A51 (LytTR family DNA-binding domain-containing protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI0003777A51)

HSP 1 Score: 52.4 bits (124), Expect = 7.430e-7
Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPEAKKETIVSIDRAMDFKNWLN 36
            M+ YSKGR+K+TL+P A+++TIVS +R+  FK WLN
Sbjct:  211 MVTYSKGRVKLTLQPAAEQDTIVSTERSPVFKKWLN 246          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: UPI000D07F835 (LytTR family DNA-binding domain-containing protein n=1 Tax=Marinilabilia salmonicolor TaxID=989 RepID=UPI000D07F835)

HSP 1 Score: 50.8 bits (120), Expect = 2.740e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPE--AKKETIVSIDRAMDFKNWLNK 37
            M AYS+GR+K+ L P   A  ETIVS+DR++ FK WLNK
Sbjct:  213 MTAYSRGRVKLELTPSPVADSETIVSVDRSLSFKKWLNK 251          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: A0A1F3LEA5_9BACT (DNA-binding response regulator n=1 Tax=Bacteroidetes bacterium GWF2_40_14 TaxID=1797347 RepID=A0A1F3LEA5_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 3.790e-6
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPEAKKE--TIVSIDRAMDFKNWLNK 37
            M A+S+ R+KI L P A+ E  TIVSIDR+ +FKNW+NK
Sbjct:  214 MTAWSRSRIKIVLNPAAENEMDTIVSIDRSAEFKNWMNK 252          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: UPI001A96B152 (LytTR family DNA-binding domain-containing protein n=1 Tax=Segetibacter sp. SYSU D00508 TaxID=2810307 RepID=UPI001A96B152)

HSP 1 Score: 49.3 bits (116), Expect = 9.940e-6
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    4 YSKGRLKITLEPEAKKETIVSIDRAMDFKNWLNK 37
            +SKGRLK+ L+P +K+E  VS+D+  DFK WL K
Sbjct:  219 FSKGRLKLDLQPASKEEVFVSLDKVTDFKEWLGK 252          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: A0A838TD52_9BACT (Response regulator transcription factor n=1 Tax=Chitinophagales bacterium TaxID=2448779 RepID=A0A838TD52_9BACT)

HSP 1 Score: 49.3 bits (116), Expect = 9.970e-6
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 MIAYSKGRLKITLEPEAKKETIVSIDRAMDFKNWL 35
            M+AYSK R+KI L P +  ETI S++R+ DFK WL
Sbjct:  216 MLAYSKSRVKILLNPPSSHETITSVERSSDFKKWL 250          
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Match: UPI001EFF9C97 (LytTR family DNA-binding domain-containing protein n=2 Tax=Chitinophagaceae TaxID=563835 RepID=UPI001EFF9C97)

HSP 1 Score: 48.5 bits (114), Expect = 1.900e-5
Identity = 19/34 (55.88%), Postives = 26/34 (76.47%), Query Frame = 0
Query:    4 YSKGRLKITLEPEAKKETIVSIDRAMDFKNWLNK 37
            YSKGRLK+ L+P  K+E  VS+D+ ++FK WL K
Sbjct:  222 YSKGRLKLELQPAHKEEVFVSMDKVVEFKEWLGK 255          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70959.16936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A1M3D243_9BACT5.640e-864.10DNA-binding response regulator n=1 Tax=Bacteroidet... [more]
UPI00198D2AF97.760e-862.16Response regulator transcription factor n=1 Tax=Ch... [more]
UPI0019B093911.490e-762.16Response regulator transcription factor n=1 Tax=Fi... [more]
UPI00199CC2D21.790e-756.76Response regulator transcription factor n=1 Tax=Ve... [more]
UPI0003777A517.430e-758.33LytTR family DNA-binding domain-containing protein... [more]
UPI000D07F8352.740e-658.97LytTR family DNA-binding domain-containing protein... [more]
A0A1F3LEA5_9BACT3.790e-658.97DNA-binding response regulator n=1 Tax=Bacteroidet... [more]
UPI001A96B1529.940e-655.88LytTR family DNA-binding domain-containing protein... [more]
A0A838TD52_9BACT9.970e-657.14Response regulator transcription factor n=1 Tax=Ch... [more]
UPI001EFF9C971.900e-555.88LytTR family DNA-binding domain-containing protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70959contigM-pyrifera_M_contig70959:1030..1143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70959.16936.1mRNA_M-pyrifera_M_contig70959.16936.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70959 1030..1164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70959.16936.1 ID=prot_M-pyrifera_M_contig70959.16936.1|Name=mRNA_M-pyrifera_M_contig70959.16936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
MIAYSKGRLKITLEPEAKKETIVSIDRAMDFKNWLNK*
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