mRNA_M-pyrifera_M_contig68527.16486.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68527.16486.1
Unique NamemRNA_M-pyrifera_M_contig68527.16486.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A2R5H2Q8_9STRA (Cilia-and flagella-associated protein 58 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H2Q8_9STRA)

HSP 1 Score: 292 bits (747), Expect = 4.890e-88
Identity = 173/351 (49.29%), Postives = 242/351 (68.95%), Query Frame = 1
Query:    1 KEHEVEVVSKRLTDTESAAKRLETELTRGAERIKAEVARVKDAEAAAGEARDHASTQEKVLQRFQKDREKEGLEGD------------LRLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            KE EV+ + + L   E A  R + +    A+++K      K+ E      +  AS Q K++ + +KDREK G+E              ++LK+ Q+ E +K+  E+E +LK+Q+QLY+ VR+DRNL+SK LIE+QDEIAE++RKFKIMN QV+QLKE+I AKD +LV  HFD++   K+ +   +E   +++ L  ++  +      + +L   I+K+D+EA  QR++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S LR GETQY +R+ DIRVLKLKIGD++R LA+ + +G S  +L+RE+  LQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:  384 KEKEVDTLKRGLELQEKAVSREQQKTKVVADQVKVSERTSKNLENEIYAFKQEASKQRKLIYQLEKDREKYGVEASEAGAKYHQALEQIKLKEMQMGEMQKKVVESENKLKQQQQLYEAVRSDRNLYSKNLIESQDEIAEMKRKFKIMNHQVEQLKEEITAKDHALVKEHFDHQKVEKQKEQLKNELSKMKSLLEANEQTINAQNAEILKLTHMIQKMDDEALRQRKEYDQVINERDILGTQLIRRNDELALLYEKIKIQQSTLRNGETQYRERLHDIRVLKLKIGDMKRQLAINKNQGGSVGDLKREIFNLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 734          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A5A8DY89_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DY89_CAFRO)

HSP 1 Score: 290 bits (742), Expect = 4.970e-87
Identity = 177/365 (48.49%), Postives = 243/365 (66.58%), Query Frame = 1
Query:    1 KEHEVEVVSKRLTDTESAAKRLETELTRGAERIKAEVARVKDAEAAAGEARDHASTQEKVLQRFQK------------DREKEGLE--------------GDLRLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            KE E E  ++ L   ++   RLE  + + AER++ E  R  +AE AA E    A   E  L+++ +            DR    L+                ++ ++AQ+ EAEKRE+ AE RL++Q+ LYD VR +RN +SK+LI ++DE  ELRRK +   RQ +QL+ D AAKDR+LVA+ FD+K ++K+L+DKA E D LR AL K+   V+QL  VV ELN A++++D EAAEQRR  G+LV ERD++G QL+RRNDE+ALL+EK+DI  S L+KG  QY++R+ED+RVLKLK+GDLRR L          E L+R++ +LQR+L+ E TK KAL+EELENPMNVHRWRRLEGSDP+T+E
Sbjct:  368 KEKEAETGTRALGQAQNQVSRLEHAVRQEAERVRIEATRKMEAEEAAAETXXXAKRTESELEKYARVNADLNKKLFALDRVVSALKRRILDLEAARSEAADTVKAREAQVKEAEKREAAAEGRLRQQKTLYDEVRNERNRYSKKLIASRDENTELRRKIRTKTRQAEQLELDNAAKDRTLVAVRFDSKTSSKKLEDKAREADELRGALVKAQREVQQLRAVVAELNAAVKRMDAEAAEQRRTAGKLVNERDMVGMQLIRRNDEVALLHEKIDIMESTLKKGAAQYSERLEDMRVLKLKVGDLRRQLVTANTAAGRVESLQRQIVQLQRELMAERTKTKALAEELENPMNVHRWRRLEGSDPSTYE 732          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A7S3XSB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSB1_HETAK)

HSP 1 Score: 271 bits (694), Expect = 3.650e-84
Identity = 160/270 (59.26%), Postives = 201/270 (74.44%), Query Frame = 1
Query:  208 KEGLEGDLRLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            KE LE +++LK+ ++ E  K+ +E E +LK+Q+QLY+ VR DRN++SK LIEAQDEIAE +RKFKIMN Q+DQLKE+IAAKD +LV  HFD + A K  D    E   LR  L + D  V +    V  L   IR+LD+EA  QR++  Q+V ERDILG QL+RRNDELALLYEK+ IQ+S LRKGE QYA R+ D+R +KLK  DL R L + +   ++  +L+REVARLQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:   69 KEALE-EVKLKEMRVNELAKKVAEWEAKLKQQQQLYESVRGDRNVYSKALIEAQDEIAETKRKFKIMNHQIDQLKEEIAAKDHALVKEHFDRERAEKAKDALREENGRLRRLLEQHDDTVHKQDAEVRRLAAMIRRLDDEALGQRKEYDQVVNERDILGTQLIRRNDELALLYEKLKIQASTLRKGEAQYAGRLRDLRAMKLKAVDLERELRVAKTGNSAMGDLKREVARLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 337          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A3R7WKI4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WKI4_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.180e-82
Identity = 147/264 (55.68%), Postives = 205/264 (77.65%), Query Frame = 1
Query:  226 DLRLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            +++LKD ++ E +K+ +E + +LK+Q+QLY+ VR+DRNL+SK LIE+QDEIAE++RKFKI+N Q++QLKE+++AKD +LV  HFD++   K+ +   +E   LR  LA ++  +      + +L T IR++D+EA EQ+++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S L KGETQY +R+ DIRVLKLKI D++R L + + +    ++L+REV  LQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:  251 EIKLKDMRMYEMQKKVTEGDGKLKQQQQLYEAVRSDRNLYSKNLIESQDEIAEMKRKFKIINHQIEQLKEEVSAKDHALVKEHFDHQKVEKQREQHKNELARLRTLLATNEETINNQDAEIRKLTTMIRRMDDEALEQKKEYDQVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGETQYQERMADIRVLKLKITDMKRELHIAKHQVGQLDDLKREVYHLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 514          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A024ULA7_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024ULA7_9STRA)

HSP 1 Score: 274 bits (700), Expect = 2.880e-81
Identity = 148/264 (56.06%), Postives = 205/264 (77.65%), Query Frame = 1
Query:  226 DLRLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            +++LKD +I E +K+ +E + +LK+Q+QLY+ VR+DRNL+SK LIE+QDEIAE++RKFKI+N Q++QLKE+++AKD +LV  HFD++   K+ +   +E   LR  LA ++  +      + +L T IR++D+EA EQ+++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S L KGETQY +R+ DIRVLKLKI D++R L + + +    ++L+REV  LQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:  476 EIKLKDMRIYEMQKKVTEGDGKLKQQQQLYEAVRSDRNLYSKNLIESQDEIAEMKRKFKIINHQIEQLKEEVSAKDHALVKEHFDHQKVEKQREQHKNELARLRTLLATNEETINNQDAEIRKLTTMIRRMDDEALEQKKEYDQVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGETQYQERMADIRVLKLKITDMKRELHIAKHQVGQLDDLKREVYHLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 739          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A225X4F6_9STRA (Flagellar associated protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=A0A225X4F6_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.700e-80
Identity = 149/262 (56.87%), Postives = 202/262 (77.10%), Query Frame = 1
Query:  232 RLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            +LK+ +  + +K+  E ET+LK+Q+QLY+ VR++RNL+SK LIE+QDEIAE++RKFKI+  Q++QLKE++AAKD +LV  HFD++   K+ +    E   LRA LA ++  +      V +L+T IR++D+EA EQR++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S L KGE QY +R++DIRVLKLK+ DL+R L + + +    +EL+REV  LQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:  481 KLKEMRNHDLQKKVHEGETKLKQQQQLYEAVRSERNLYSKNLIESQDEIAEMKRKFKILTHQIEQLKEEVAAKDVALVKEHFDHQKVEKQKEQHKSELARLRALLAANEETINNQDAEVRKLSTLIRRMDDEALEQRKEYDQVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKVTDLKRELYIAKHQVGQADELKREVYHLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 742          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A0W8DQ27_PHYNI (Lipase_3 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DQ27_PHYNI)

HSP 1 Score: 271 bits (694), Expect = 7.660e-79
Identity = 149/262 (56.87%), Postives = 202/262 (77.10%), Query Frame = 1
Query:  232 RLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            +LK+ +  + +K+  E ET+LK+Q+QLY+ VR++RNL+SK LIE+QDEIAE++RKFKI+  Q++QLKE++AAKD +LV  HFD++   K+ +    E   LRA LA ++  +      V +L+T IR++D+EA EQR++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S L KGE QY +R++DIRVLKLK+ DL+R L + + +    +EL+REV  LQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:  482 KLKEMRNHDLQKKVHEGETKLKQQQQLYEAVRSERNLYSKNLIESQDEIAEMKRKFKILTHQIEQLKEEVAAKDVALVKEHFDHQKVEKQKEQHKSELARLRALLAANEETINNQDAEVRKLSTLIRRMDDEALEQRKEYDQVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKVTDLKRELYIAKHQVGQADELKREVYHLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 743          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A8K1CHY7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHY7_PYTOL)

HSP 1 Score: 268 bits (684), Expect = 8.610e-79
Identity = 145/248 (58.47%), Postives = 193/248 (77.82%), Query Frame = 1
Query:  274 SEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            +E ET+LK+Q+QLY+ VR++RNL+ K LIE+QDEIAE++RKFKIM  Q++QLKE+++AKD +LV  HFD++   K+ +   +E   LRA LA ++  +      + +L T IR++D+EA EQR++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S L KGE QY +R++DIRVLKLKI DL+R L + + +    +EL+REV  LQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:  495 NEGETKLKQQQQLYEAVRSERNLYGKNLIESQDEIAEMKRKFKIMTHQIEQLKEEVSAKDIALVKEHFDHQKVEKQKEQHKNELARLRALLATNEETINNQDAEIRKLTTMIRRMDDEALEQRKEYDQVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKITDLKRELYIAKHQVGQSDELKREVYHLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 742          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A3R7I279_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7I279_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.400e-78
Identity = 148/262 (56.49%), Postives = 201/262 (76.72%), Query Frame = 1
Query:  232 RLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            +LK+ +  + +K+  E ET+LK+Q+QLY+ VR++RNL+SK LIE+QDEIAE++RKFKI+  Q++QLKE++AAKD +LV  HFD++   K+ +    E   LRA L  ++  +      V +L+T IR++D+EA EQR++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S L KGE QY +R++DIRVLKLK+ DL+R L + + +    +EL+REV  LQR+LLQE TKVKALSEELENPMNVHRWR+LEGSDPAT+E
Sbjct:  818 KLKEMRNHDLQKKVHEGETKLKQQQQLYEAVRSERNLYSKNLIESQDEIAEMKRKFKILTHQIEQLKEEVAAKDVALVKEHFDHQKVEKQKEQHKSELARLRALLGANEETINNQDAEVRKLSTLIRRMDDEALEQRKEYDQVINERDILGTQLIRRNDELALLYEKLKIQQSTLSKGEAQYQERLQDIRVLKLKVTDLKRELYIAKHQVGQADELKREVYHLQRELLQEKTKVKALSEELENPMNVHRWRKLEGSDPATYE 1079          
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Match: A0A836CGY9_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGY9_9STRA)

HSP 1 Score: 265 bits (678), Expect = 2.690e-78
Identity = 159/293 (54.27%), Postives = 204/293 (69.62%), Query Frame = 1
Query:  175 KVLQRFQKDREKEGLE------------GDLRLKDAQIAEAEKRESEAETRLKKQRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAKDRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELNTAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSSVLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARLQRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE 1017
            K L R +++REK G E             D++L++ +I E  KR  E E +LK+Q+QLY+ VR+DRNL+SK LIEAQDEIAE++RKFKIMN Q++QLKE+I AKD +LV  HFD++ A K+        D +R  L  +D  + +    V  L   +R+++EEA  QR++  Q++ ERDILG QL+RRNDELALLYEK+ IQ S L KGE  YAQR+ D+R L+LK  DL R LAL +   N  EEL+RE   ++RDLLQE TKVKALSEELENPMNVHRWR+LEGSDPA FE
Sbjct:  424 KDLARLEREREKFGEELSDARQMYMQALEDVKLREMRINELGKRVGEWEGKLKQQQQLYESVRSDRNLYSKSLIEAQDEIAEMKRKFKIMNHQIEQLKEEITAKDHALVKEHFDHQRADKQXXXXXXXXDRMRRLLEANDDVIHKQDAEVRRLAAMMRRMEEEALRQRKEYDQVINERDILGTQLIRRNDELALLYEKLKIQQSTLAKGEASYAQRMVDLRALRLKAQDLARDLALCKNSSNQVEELKREALHMRRDLLQEKTKVKALSEELENPMNVHRWRKLEGSDPAMFE 716          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68527.16486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5H2Q8_9STRA4.890e-8849.29Cilia-and flagella-associated protein 58 n=1 Tax=H... [more]
A0A5A8DY89_CAFRO4.970e-8748.49Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A7S3XSB1_HETAK3.650e-8459.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3R7WKI4_9STRA1.180e-8255.68Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A024ULA7_9STRA2.880e-8156.06Uncharacterized protein n=11 Tax=Aphanomyces TaxID... [more]
A0A225X4F6_9STRA2.700e-8056.87Flagellar associated protein n=23 Tax=Peronosporac... [more]
A0A0W8DQ27_PHYNI7.660e-7956.87Lipase_3 domain-containing protein n=1 Tax=Phytoph... [more]
A0A8K1CHY7_PYTOL8.610e-7958.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7I279_9STRA2.400e-7856.49Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A836CGY9_9STRA2.690e-7854.27Flagellar associated protein n=1 Tax=Tribonema min... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68527contigM-pyrifera_M_contig68527:3..1097 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.5
Seed ortholog evalue1.3e-73
Seed eggNOG ortholog4787.PITG_05499T0
Preferred nameFAP189
Hectar predicted targeting categoryother localisation
GOsGO:0001539,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0060285
EggNOG OGs28HHA@1,2QPV7@2759,3Q9P5@4776
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1017
Cds size1017
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816577.3338065-CDS-M-pyrifera_M_contig68527:2..8271622816577.3338065-CDS-M-pyrifera_M_contig68527:2..827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68527 3..827 -
1692278057.1686409-CDS-M-pyrifera_M_contig68527:2..8271692278057.1686409-CDS-M-pyrifera_M_contig68527:2..827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68527 3..827 -
1622816577.347269-CDS-M-pyrifera_M_contig68527:905..10971622816577.347269-CDS-M-pyrifera_M_contig68527:905..1097Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68527 906..1097 -
1692278057.1819005-CDS-M-pyrifera_M_contig68527:905..10971692278057.1819005-CDS-M-pyrifera_M_contig68527:905..1097Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68527 906..1097 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68527.16486.1prot_M-pyrifera_M_contig68527.16486.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68527 3..1097 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68527.16486.1

>prot_M-pyrifera_M_contig68527.16486.1 ID=prot_M-pyrifera_M_contig68527.16486.1|Name=mRNA_M-pyrifera_M_contig68527.16486.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=339bp
KEHEVEVVSKRLTDTESAAKRLETELTRGAERIKAEVARVKDAEAAAGEA
RDHASTQEKVLQRFQKDREKEGLEGDLRLKDAQIAEAEKRESEAETRLKK
QRQLYDRVRADRNLFSKQLIEAQDEIAELRRKFKIMNRQVDQLKEDIAAK
DRSLVAMHFDNKAAAKRLDDKAHECDVLRAALAKSDANVKQLTTVVDELN
TAIRKLDEEAAEQRRKVGQLVTERDILGAQLVRRNDELALLYEKVDIQSS
VLRKGETQYAQRVEDIRVLKLKIGDLRRTLALERRKGNSGEELRREVARL
QRDLLQESTKVKALSEELENPMNVHRWRRLEGSDPATFE
back to top

mRNA from alignment at M-pyrifera_M_contig68527:3..1097-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68527.16486.1 ID=mRNA_M-pyrifera_M_contig68527.16486.1|Name=mRNA_M-pyrifera_M_contig68527.16486.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1095bp|location=Sequence derived from alignment at M-pyrifera_M_contig68527:3..1097- (Macrocystis pyrifera P11B4 male)
AAGGAGCACGAGGTGGAGGTCGTGAGCAAGCGCCTCACCGACACAGAATC TGCTGCGAAGCGACTGGAGACGGAGCTGACACGAGGCGCAGAGCGCATCA AGGCCGAGGTGGCGCGGGTGAAGGACGCAGAAGCCGCGGCGGGAGAGGCA AGAGACCACGCCTCGACGCAAGAAAAGGTGCTGCAGCGGTTCGTGCGCCA GCAGGACATGATGCGGTCGACCATCATGTCTCTGGAGCGGCACATCCAGG CGCTGCGGCTGCAGGCCGAGCAGAAGGACCGCGAAAAGGAGGGCCTGGAA GGGGACCTGCGGCTCAAGGACGCGCAGATTGCAGAGGCGGAAAAGAGGGA GTCGGAGGCGGAGACGAGGCTCAAGAAACAAAGGCAGCTCTACGACCGCG TGCGCGCAGACAGAAACCTCTTCTCCAAACAGCTCATCGAGGCGCAGGAC GAAATCGCCGAACTGCGCAGAAAGTTCAAGATCATGAACCGGCAGGTGGA CCAGCTCAAGGAAGACATTGCCGCAAAGGACAGGTCCCTCGTCGCAATGC ACTTTGACAACAAGGCTGCGGCGAAGCGCCTCGACGACAAGGCACATGAG TGTGACGTGCTCCGAGCCGCCCTGGCCAAATCCGACGCAAACGTGAAGCA ACTCACCACAGTGGTCGACGAACTCAACACGGCCATCAGAAAACTCGACG AAGAAGCCGCAGAGCAGCGCCGGAAAGTGGGACAACTGGTCACGGAACGA GACATTCTTGGCGCACAACTCGTGCGCCGAAACGACGAGCTCGCTCTTTT GTACGAAAAGGTTGACATCCAGTCCTCGGTGCTGCGCAAAGGAGAGACAC AATACGCTCAGCGTGTCGAAGATATTCGCGTCCTCAAGCTCAAGATTGGA GACTTGAGACGCACCCTCGCCTTGGAGCGTCGCAAAGGTAACTCTGGTGA AGAATTGCGACGAGAAGTTGCACGGTTGCAGCGAGACTTGCTCCAAGAAT CCACCAAAGTCAAGGCACTCTCTGAAGAACTGGAAAACCCCATGAACGTC CATCGATGGCGAAGATTGGAAGGCTCAGATCCTGCAACATTCGAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig68527:3..1097-

>mRNA_M-pyrifera_M_contig68527.16486.1 ID=mRNA_M-pyrifera_M_contig68527.16486.1|Name=mRNA_M-pyrifera_M_contig68527.16486.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2034bp|location=Sequence derived from alignment at M-pyrifera_M_contig68527:3..1097- (Macrocystis pyrifera P11B4 male)
AAGGAGCACGAGGTGGAGGTCGTGAGCAAGCGCCTCACCGACACAGAATC
TGCTGCGAAGCGACTGGAGACGGAGCTGACACGAGGCGCAGAGCGCATCA
AGGCCGAGGTGGCGCGGGTGAAGGACGCAGAAGCCGCGGCGGGAGAGGCA
AGAGACCACGCCTCGACGCAAGAAAAGGTGCTGCAGCGGTTCAAGGAGCA
CGAGGTGGAGGTCGTGAGCAAGCGCCTCACCGACACAGAATCTGCTGCGA
AGCGACTGGAGACGGAGCTGACACGAGGCGCAGAGCGCATCAAGGCCGAG
GTGGCGCGGGTGAAGGACGCAGAAGCCGCGGCGGGAGAGGCAAGAGACCA
CGCCTCGACGCAAGAAAAGGTGCTGCAGCGGTTCCAGAAGGACCGCGAAA
AGGAGGGCCTGGAAGGGGACCTGCGGCTCAAGGACGCGCAGATTGCAGAG
GCGGAAAAGAGGGAGTCGGAGGCGGAGACGAGGCTCAAGAAACAAAGGCA
GCTCTACGACCGCGTGCGCGCAGACAGAAACCTCTTCTCCAAACAGCTCA
TCGAGGCGCAGGACGAAATCGCCGAACTGCGCAGAAAGTTCAAGATCATG
AACCGGCAGGTGGACCAGCTCAAGGAAGACATTGCCGCAAAGGACAGGTC
CCTCGTCGCAATGCACTTTGACAACAAGGCTGCGGCGAAGCGCCTCGACG
ACAAGGCACATGAGTGTGACGTGCTCCGAGCCGCCCTGGCCAAATCCGAC
GCAAACGTGAAGCAACTCACCACAGTGGTCGACGAACTCAACACGGCCAT
CAGAAAACTCGACGAAGAAGCCGCAGAGCAGCGCCGGAAAGTGGGACAAC
TGGTCACGGAACGAGACATTCTTGGCGCACAACTCGTGCGCCGAAACGAC
GAGCTCGCTCTTTTGTACGAAAAGGTTGACATCCAGTCCTCGGTGCTGCG
CAAAGGAGAGACACAATACGCTCAGCGTGTCGAAGATATTCGCGTCCTCA
AGCTCAAGATTGGAGACTTGAGACGCACCCTCGCCTTGGAGCGTCGCAAA
GGTAACTCTGGTGAAGAATTGCGACGAGAAGTTGCACGGTTGCAGCGAGA
CTTGCTCCAAGAATCCACCAAAGTCAAGGCACTCTCTGAAGAACTGGAAA
ACCCCATGAACGTCCATCGATGGCGAAGATTGGAAGGCTCAGATCCTGCA
ACATTCGAACAGAAGGACCGCGAAAAGGAGGGCCTGGAAGGGGACCTGCG
GCTCAAGGACGCGCAGATTGCAGAGGCGGAAAAGAGGGAGTCGGAGGCGG
AGACGAGGCTCAAGAAACAAAGGCAGCTCTACGACCGCGTGCGCGCAGAC
AGAAACCTCTTCTCCAAACAGCTCATCGAGGCGCAGGACGAAATCGCCGA
ACTGCGCAGAAAGTTCAAGATCATGAACCGGCAGGTGGACCAGCTCAAGG
AAGACATTGCCGCAAAGGACAGGTCCCTCGTCGCAATGCACTTTGACAAC
AAGGCTGCGGCGAAGCGCCTCGACGACAAGGCACATGAGTGTGACGTGCT
CCGAGCCGCCCTGGCCAAATCCGACGCAAACGTGAAGCAACTCACCACAG
TGGTCGACGAACTCAACACGGCCATCAGAAAACTCGACGAAGAAGCCGCA
GAGCAGCGCCGGAAAGTGGGACAACTGGTCACGGAACGAGACATTCTTGG
CGCACAACTCGTGCGCCGAAACGACGAGCTCGCTCTTTTGTACGAAAAGG
TTGACATCCAGTCCTCGGTGCTGCGCAAAGGAGAGACACAATACGCTCAG
CGTGTCGAAGATATTCGCGTCCTCAAGCTCAAGATTGGAGACTTGAGACG
CACCCTCGCCTTGGAGCGTCGCAAAGGTAACTCTGGTGAAGAATTGCGAC
GAGAAGTTGCACGGTTGCAGCGAGACTTGCTCCAAGAATCCACCAAAGTC
AAGGCACTCTCTGAAGAACTGGAAAACCCCATGAACGTCCATCGATGGCG
AAGATTGGAAGGCTCAGATCCTGCAACATTCGAA
back to top