mRNA_M-pyrifera_M_contig6840.16461.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A6H5KJ22_9PHAE (BED-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ22_9PHAE) HSP 1 Score: 262 bits (670), Expect = 9.370e-83 Identity = 144/236 (61.02%), Postives = 155/236 (65.68%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYAERVAKKARTADSNSGEGPSTAQ-----EMPAGGISAPGQNTGAFGQGMPQQGEAQPQMPGMMFHGGAPVPGLGFHPMGQPGY-PGMMGEPRPGFNRMQHGMPQMQHGVANMPPHMFGGPRGPNGXXXXXXSGAMQGGYQR 690
MGKKKKQ V KD+ EAWCYYCDRVFEHEEVLI HQK KH C C KKLSTAGGLVVH QVH+ETI+ VPNAKEGR+SVD EIYG+NGIP EA+AER AKKAR A +N E P + PGQ GQGMP Q MPGMMF GGAP PG+GFHPMGQPG+ PGMMG P HG NMPPHM GGPRGPNG G MQGG+ R
Sbjct: 1 MGKKKKQKVAKDETEAWCYYCDRVFEHEEVLILHQKTKHLSCMFCKKKLSTAGGLVVHAQQVHRETISEVPNAKEGRKSVDLEIYGINGIPAEAWAERAAKKARIAGTNGXXXXXXXXXXXXPETPKVETATPGQQPAXXGQGMPPQFNGHQPMPGMMFPGGAPGPGMGFHPMGQPGFHPGMMGPXXXXXXXXXXXXPPPMHGGPNMPPHMLGGPRGPNGQML---GGPMQGGFPR 233
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A835ZE93_9STRA (BED-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE93_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.190e-43 Identity = 77/111 (69.37%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYAERVAKKARTADSNSG 333
MGKKKKQ V ++ ++ WC+YCDRVF+HEEVLIQHQKAKHFKC CNKKL+TAGGLVVH QVHKET+T V NAKEGRES ++EI+G+ GIP EA AER A+KA A +G
Sbjct: 1 MGKKKKQKVEEEKEQPWCFYCDRVFDHEEVLIQHQKAKHFKCLVCNKKLTTAGGLVVHCQQVHKETVTQVQNAKEGRESAEYEIFGMEGIPAEAIAERAARKAAEAAGTAG 111
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A7S3YKR3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKR3_HETAK) HSP 1 Score: 139 bits (350), Expect = 4.190e-37 Identity = 62/101 (61.39%), Postives = 82/101 (81.19%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYAERVAK 303
MGKKKK++ +++++ WC+YC+R+FE E+VLIQHQK+KHFKC CNKKLSTAGG+VVH QVHKETI V NA + R++ D+EIYG+ G+P+EA E AK
Sbjct: 1 MGKKKKKTAVREEEKPWCFYCERIFEDEKVLIQHQKSKHFKCHVCNKKLSTAGGMVVHCLQVHKETIKNVHNAIKERDTTDYEIYGMEGVPQEAVDEHRAK 101
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A834FYY0_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FYY0_RHOSS) HSP 1 Score: 136 bits (343), Expect = 2.270e-36 Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYA 288
MGKKKK++ K E WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+V+H QVHKE++ VPNAK GRES D EIYG+ GIP + A
Sbjct: 1 MGKKKKRAALK---EVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHKESVPKVPNAKPGRESTDIEIYGMQGIPPDVLA 93
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: T1E1I5_SILLA (C2H2-type zinc finger protein (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=T1E1I5_SILLA) HSP 1 Score: 134 bits (336), Expect = 1.830e-35 Identity = 61/96 (63.54%), Postives = 75/96 (78.12%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYA 288
MG+KKK+ K +CYYCDR F+ E++L+QHQKAKHFKC CNKKLSTAGG+V+H QVHKE++T VPNAKEGRES + EIYG+ GIP + A
Sbjct: 1 MGRKKKRQNDK----VFCYYCDREFDDEKILVQHQKAKHFKCHACNKKLSTAGGMVIHVLQVHKESVTKVPNAKEGRESTEIEIYGMQGIPADVLA 92
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A1Q3BMZ7_CEPFO (BED-type domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BMZ7_CEPFO) HSP 1 Score: 135 bits (339), Expect = 2.490e-35 Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYAERVAKKARTADS 324
MGKKKK+ K WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+ +H QVHKE++T VPNAK GRES D EIYG+ GIP + A ++ A S
Sbjct: 1 MGKKKKRVPSK----VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKSGRESTDIEIYGMQGIPPDVLAAHYGEEEEEAPS 104
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A2I4H1I3_JUGRE (protein SUPPRESSOR OF FRI 4-like n=16 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4H1I3_JUGRE) HSP 1 Score: 141 bits (356), Expect = 3.120e-35 Identity = 84/177 (47.46%), Postives = 107/177 (60.45%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYAERVAKKARTADSNSGEG--PSTAQEMPAGGISAPGQNTGAFGQGMPQQGEAQPQMPGMMFHGGAPVPGLGF--HPMGQPGY 519
MGKKKK++ K WCYYCDR FE E++L+QHQKAKHFKC C+KKLSTAGG+++H QVHKE++T VPNAK RES D EIYG+ GIP + A ++ A S + PST++ GG+ PG + AFG P QP G ++ PVP + P QP Y
Sbjct: 1 MGKKKKRTSSK----VWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMIIHVLQVHKESVTKVPNAKPSRESTDIEIYGMQGIPPDVLAAHYGEEEGDAPSKVAKVDIPSTSR----GGV-VPGSS--AFGYPQPTLSTMQPMGVGYSYNSAVPVPPAAWAVRPRPQPWY 166
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A7J7GW28_CAMSI (BED-type domain-containing protein n=4 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GW28_CAMSI) HSP 1 Score: 139 bits (351), Expect = 6.220e-35 Identity = 64/96 (66.67%), Postives = 76/96 (79.17%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYA 288
MGKKKK++V K WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+V+H QVHKE+IT VPNAK GRES D EIYG+ GIP + A
Sbjct: 1 MGKKKKRAVSK----VWCYYCDREFDDEKILVQHQKAKHFKCHACHKKLSTAGGMVIHVLQVHKESITKVPNAKPGRESTDIEIYGMQGIPPDVLA 92
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: A0A0D2SV14_GOSRA (BED-type domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2SV14_GOSRA) HSP 1 Score: 137 bits (345), Expect = 1.460e-34 Identity = 77/168 (45.83%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYAERVAKKARTADSNSGEGPSTAQEMPAGGISAPGQNTGAFGQGMPQQ---GEAQPQMPGMMFHGGAPVPGLGF 495
MGKKKK+ K WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+ +H QVHKE++T VPNAK GRES D EIYG+ GIP + A ++ A S + + + ++ G + P G G P Q G QP M++ PVP +G+
Sbjct: 1 MGKKKKRVPSK----VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEEAPSKAAKLDIPSTQLVGGLMPGP------LGVGYPPQSTLGAVQP-----MYNAAVPVPPVGW 153
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Match: UPI001263C3E2 (protein SUPPRESSOR OF FRI 4 n=2 Tax=Anacardiaceae TaxID=4011 RepID=UPI001263C3E2) HSP 1 Score: 139 bits (350), Expect = 2.030e-34 Identity = 80/176 (45.45%), Postives = 99/176 (56.25%), Query Frame = 1
Query: 1 MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSTAGGLVVHNSQVHKETITAVPNAKEGRESVDFEIYGVNGIPEEAYAERVAKKARTADSNSGEGPSTAQEMPAGGISAPGQNTGAFGQGMPQQGEAQPQMPGMMFHGGAPVPGLGFH--PMGQPGYP 522
MGKKKK+ K WCYYCDR F+ E++L+QHQKAKHFKC C+KKLSTAGG+ +H QVHKE++T VPNAK GRES D EIYG+ GIP + A ++ E PS ++ G G G G P Q P ++ PVP G+ P QP YP
Sbjct: 1 MGKKKKRVASK----VWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKAGRESTDIEIYGMQGIPPDVLAAHYGEEEE-------EAPSKVAKVDTPYTQLAGMVPGQLGVGYPPQSTLGAMRP--IYSSAVPVPPAGWPVPPRPQPWYP 163 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6840.16461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6840.16461.1 >prot_M-pyrifera_M_contig6840.16461.1 ID=prot_M-pyrifera_M_contig6840.16461.1|Name=mRNA_M-pyrifera_M_contig6840.16461.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=349bp MGKKKKQSVPKDDKEAWCYYCDRVFEHEEVLIQHQKAKHFKCPTCNKKLSback to top mRNA from alignment at M-pyrifera_M_contig6840:192..2978+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6840.16461.1 ID=mRNA_M-pyrifera_M_contig6840.16461.1|Name=mRNA_M-pyrifera_M_contig6840.16461.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2787bp|location=Sequence derived from alignment at M-pyrifera_M_contig6840:192..2978+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6840:192..2978+ >mRNA_M-pyrifera_M_contig6840.16461.1 ID=mRNA_M-pyrifera_M_contig6840.16461.1|Name=mRNA_M-pyrifera_M_contig6840.16461.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2094bp|location=Sequence derived from alignment at M-pyrifera_M_contig6840:192..2978+ (Macrocystis pyrifera P11B4 male)back to top |