mRNA_M-pyrifera_M_contig107653.1634.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A2D6UA30_9ACTN (Riboflavin synthase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UA30_9ACTN) HSP 1 Score: 278 bits (710), Expect = 8.300e-93 Identity = 138/190 (72.63%), Postives = 159/190 (83.68%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVERLVRPS 570
EVGT+RSV VGEGAR+ I A TVL D +GASIAVNGCCLTV+E+ + WAADAVPET+DRTN+G L PGD VNLERPLAANGRYGGHVVQGHVD T + I+ELDDGS+R+ F LP+ +A YVVEKGS+A+DGISLTVAAV S+FS+AIIPHT VT +G R VGD VN+EADVLAKYVERLVRP+
Sbjct: 8 EVGTIRSVASVGEGARVTIAASTVLGDVEMGASIAVNGCCLTVVEWGDDWWAADAVPETMDRTNLGGLAPGDPVNLERPLAANGRYGGHVVQGHVDGTGEVHSIEELDDGSWRFTFTLPSELANYVVEKGSIAVDGISLTVAAVTPSTFSIAIIPHTFAVTAMGQRNVGDTVNLEADVLAKYVERLVRPA 197
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A3M2GM54_ACTSX (Riboflavin synthase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GM54_ACTSX) HSP 1 Score: 236 bits (602), Expect = 2.730e-76 Identity = 123/192 (64.06%), Postives = 145/192 (75.52%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVD--ASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVERLVRPS 570
E+G +R P G+GAR+ I A VL+ A+LG SIAV+GCCLTV+E WAADAVPETL RT +G PGD VNLERPL A+GR+GGH+VQGHVDAT + E DDGS+R RF LP + YVVEKGS+A+DG+SLTVAAVD +F +A+IPHTH VTTLG R GDRVNVEAD+LAKYVERLV S
Sbjct: 8 ELGELRERLPTGDGARLRIGASRVLEGAALGDSIAVDGCCLTVVELGEGWWAADAVPETLARTTLGDRAPGDAVNLERPLRADGRFGGHIVQGHVDATTELVERRACDDGSWRLRFALPPAVDRYVVEKGSIAIDGVSLTVAAVDERGGTFEIALIPHTHAVTTLGRRRPGDRVNVEADILAKYVERLVTAS 199
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A2E1CR17_9ACTN (Riboflavin synthase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E1CR17_9ACTN) HSP 1 Score: 235 bits (599), Expect = 8.070e-76 Identity = 118/185 (63.78%), Postives = 140/185 (75.68%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVER 555
EVGTV +TP G G RI +EA V+ D S+GASIAVNGCCLTV EYD SW+ADAVPET+ RTN+G+L G +VNLERPL + GR+GGHVVQGHVD T I+ I DDGS+RY F+L YV EKGS+A+DGISLTVA+V SFSVAIIPHT T L ++VGD VN+E D+LAKY+ER
Sbjct: 8 EVGTVSRITPSGSGVRITLEAEIVIKDISIGASIAVNGCCLTVTEYDNTSWSADAVPETMSRTNLGTLALGSKVNLERPLKSEGRFGGHVVQGHVDCTTYIANISNEDDGSYRYEFDLSNEWGRYVCEKGSIAIDGISLTVASVSDDSFSVAIIPHTWGSTNLNQKSVGDLVNIEVDILAKYIER 192
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A381TAK2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381TAK2_9ZZZZ) HSP 1 Score: 235 bits (599), Expect = 8.340e-76 Identity = 125/188 (66.49%), Postives = 143/188 (76.06%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESW-AADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVERLV 561
E+G VRSV VG+G R+V+EA TVLDD +LGASIAVNGCCLTV+E+ A+ W A DAVPETLD T +G L PGD VNLERPL A GR+GGHVVQGHVD + + EL DGS R F LP +AG VVEKGSV LDG SLTVAAVD +F VA+IPHT +VTT G R GD+VNVEADVLA YV L+
Sbjct: 8 ELGAVRSVDEVGDGRRVVVEATTVLDDVTLGASIAVNGCCLTVVEW-ADGWFAVDAVPETLDCTTVGGLSPGDPVNLERPLVAGGRFGGHVVQGHVDMVTEVLAVRELSDGSRRLSFRLPDELAGKVVEKGSVTLDGASLTVAAVDNDTFDVALIPHTLQVTTFGRRAPGDQVNVEADVLAHYVAGLL 194
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A2E8BFU1_9ACTN (Riboflavin synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8BFU1_9ACTN) HSP 1 Score: 234 bits (598), Expect = 1.810e-75 Identity = 120/192 (62.50%), Postives = 148/192 (77.08%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAV-----DASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVERLV 561
E+GT+RSV VG+G R+V++A TVLDD +LGASIAVNGCCLTV+E+ + +A DAVPETLDRT +G L GDRVNLERPLAA+GR+GGHVVQGHVD + + + DGS R F LP +AG +VEKGSV LDG SLTVA+V + ++F VA+IPHT EVTT GGR+ GDR NVEADV+A+YV L+
Sbjct: 8 ELGTLRSVDAVGDGRRLVVDAATVLDDVTLGASIAVNGCCLTVVEWGDDWFAVDAVPETLDRTTVGDLSTGDRVNLERPLAADGRFGGHVVQGHVDTVTDVVAVADQSDGSRRLTFRLPGELAGQIVEKGSVTLDGTSLTVASVGNPSAEGATFDVALIPHTLEVTTFGGRSPGDRCNVEADVIARYVAGLL 199
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A2E5P2V1_9ACTN (Riboflavin synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5P2V1_9ACTN) HSP 1 Score: 232 bits (591), Expect = 1.370e-74 Identity = 119/187 (63.64%), Postives = 141/187 (75.40%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVERLV 561
E+G VRSV V +G R+VIEA TVLDD +LGASIAVNGCCLT++E+ + + DAVPETLDRT +G L PG VNLERPL A GR+GGHVVQGHVD + + EL DGS R F LP G+AG +VEKGSV LDG+SLTVAAV +F VA+IPHT +VTT G R G +VNVEADVLA+YV L+
Sbjct: 8 ELGVVRSVDKVDDGRRVVIEATTVLDDVTLGASIAVNGCCLTIVEWAGDWFGVDAVPETLDRTTVGGLRPGGLVNLERPLTAGGRFGGHVVQGHVDTVTEVLTVRELSDGSRRLSFRLPDGLAGQIVEKGSVTLDGVSLTVAAVVDDTFEVALIPHTLQVTTFGRRDSGHQVNVEADVLARYVAGLL 194
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A2E3ZF47_9ACTN (Riboflavin synthase n=6 Tax=Actinobacteria TaxID=201174 RepID=A0A2E3ZF47_9ACTN) HSP 1 Score: 231 bits (589), Expect = 2.670e-74 Identity = 114/185 (61.62%), Postives = 137/185 (74.05%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVER 555
EVG V +TP G G RI + A TV++D S+GASIAVNGCCLTV EYD SW+ADAVPET+ RTN+G+L G +VNLERPL + GR+GGHVVQGH+D T I+ I DDGS+RY F L YV EKGS+A+DGISLTVA V FS+AIIPHT T L ++VGD VN+E D+LAKY+ER
Sbjct: 8 EVGIVSGITPSGSGVRITLNAKTVIEDISIGASIAVNGCCLTVTEYDETSWSADAVPETMSRTNLGTLTHGSKVNLERPLKSEGRFGGHVVQGHIDCTTQIASISNEDDGSYRYEFNLGDDWGRYVCEKGSIAIDGISLTVANVSNDKFSIAIIPHTWSETNLNQKSVGDIVNIEVDILAKYIER 192
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A2E9LCL6_9ACTN (Riboflavin synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E9LCL6_9ACTN) HSP 1 Score: 231 bits (589), Expect = 2.670e-74 Identity = 113/185 (61.08%), Postives = 145/185 (78.38%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVER 555
EVG V ++TP G G RI ++A VL+D ++GASIAVNGCCLTV EYD SW+ADAVPET++RT++G+L G +VNLERPL ++GR+GGH+VQGHVD+T IS++ DDGS+RY F+L YV EKGS+A+DGISLTVA+V ++ FSVAIIPHT E T L + GD VN+E D+LAKY+ER
Sbjct: 8 EVGIVENITPSGSGVRISLQASIVLEDITIGASIAVNGCCLTVTEYDDLSWSADAVPETMNRTSLGTLVAGSKVNLERPLNSDGRFGGHIVQGHVDSTTTISKVSNEDDGSYRYEFDLANEWERYVCEKGSIAIDGISLTVASVASNKFSVAIIPHTWEATNLSQKNKGDIVNIEVDILAKYIER 192
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A7C7SC07_9ACTN (Riboflavin synthase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7C7SC07_9ACTN) HSP 1 Score: 231 bits (590), Expect = 8.120e-74 Identity = 116/187 (62.03%), Postives = 146/187 (78.07%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVERLV 561
E+G++RS+ VG+G R+V++A TVL D SLGASIAVNGCCLTV+E+ +A DAVPETL+RT +G++GPG+ VNLERPLAA+GR+GGHVVQGHVD + +++ L DGS R F LP +AG VVEKGS+ LDG SLTVA+V +F VA+IPHT +VTT G R GD VNVEADVLA+YV L+
Sbjct: 8 ELGSIRSIDEVGDGRRLVVDAATVLADVSLGASIAVNGCCLTVVEWGDAWFAVDAVPETLERTTLGAMGPGEAVNLERPLAADGRFGGHVVQGHVDTVTEVVDLETLSDGSRRLTFRLPDELAGQVVEKGSITLDGASLTVASVGRYTFDVALIPHTLDVTTFGRRAPGDLVNVEADVLARYVAGLL 194
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Match: A0A7Y2DB66_9ACTN (Riboflavin synthase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DB66_9ACTN) HSP 1 Score: 230 bits (586), Expect = 9.290e-74 Identity = 115/188 (61.17%), Postives = 143/188 (76.06%), Query Frame = 1
Query: 1 EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESWAADAVPETLDRTNIGSLGPGDRVNLERPLAANGRYGGHVVQGHVDATAAISEIDELDDGSFRYRFELPAGIAGYVVEKGSVALDGISLTVAAVDASSFSVAIIPHTHEVTTLGGRTVGDRVNVEADVLAKYVERLVR 564
E+G++ S+ G+GARIV+ A TVL DA+ GASIAVNGCCLT++E A WA DAVPETLDRTNIG L G VNLERPLA +GR+GGH+VQGH+D + I + DGS R+ F P +A Y+VEKGSVALDGISLTVA+ D SSF +A+IPHT VTTLG R VGD VN+E D+L K++E+L++
Sbjct: 8 ELGSITSIDHHGDGARIVVAASTVLSDATRGASIAVNGCCLTLVEQGAGWWATDAVPETLDRTNIGELQVGSPVNLERPLAGDGRFGGHIVQGHIDGVTTVMAIADQADGSRRFTFATPPHLAHYIVEKGSVALDGISLTVASDDDSSFDIAVIPHTLAVTTLGARQVGDTVNIETDILGKHIEKLLQ 195 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107653.1634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107653.1634.1 >prot_M-pyrifera_M_contig107653.1634.1 ID=prot_M-pyrifera_M_contig107653.1634.1|Name=mRNA_M-pyrifera_M_contig107653.1634.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp EVGTVRSVTPVGEGARIVIEAVTVLDDASLGASIAVNGCCLTVIEYDAESback to top mRNA from alignment at M-pyrifera_M_contig107653:2..577+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107653.1634.1 ID=mRNA_M-pyrifera_M_contig107653.1634.1|Name=mRNA_M-pyrifera_M_contig107653.1634.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig107653:2..577+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107653:2..577+ >mRNA_M-pyrifera_M_contig107653.1634.1 ID=mRNA_M-pyrifera_M_contig107653.1634.1|Name=mRNA_M-pyrifera_M_contig107653.1634.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1152bp|location=Sequence derived from alignment at M-pyrifera_M_contig107653:2..577+ (Macrocystis pyrifera P11B4 male)back to top |