prot_M-pyrifera_M_contig6763.16327.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6763.16327.1
Unique Nameprot_M-pyrifera_M_contig6763.16327.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length541
Homology
BLAST of mRNA_M-pyrifera_M_contig6763.16327.1 vs. uniprot
Match: D7FNU1_ECTSI (CG-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU1_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 3.180e-150
Identity = 323/579 (55.79%), Postives = 347/579 (59.93%), Query Frame = 0
Query:    1 ADDAAQNWPGCFRHVARCRRLNKEEVVLILSDPLKFGLVRTDVLPAEGISNGTVYLCSKDRVRVLKHDGIDYVKRNAAQGSNRIREDVVKMKVNGRHAVNSYSSRGSGSACFWRRRYALEPPSVAPNGSSRGXXXXXXXXXXXXXXXQNVTWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGRGTQLPRDGNLFLPPSRRDSRREDLATQAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLSSLVTVSSCPSSVKKEEGCFRGGGGLGGANDCGGGWVGGSGKVAPGARSNGGRYGAGG----------GPQDARGATVHNTVWAGGXXXXXXDLYAMXXXXXXHVXXXXDVAG---------IRASMPSPPGNRQGGGEGGPGSTVAFWETKKGMEAHHQXXX-AAALNAGGFADEDIGGL-EFEGLGVGDVNGGANGSNTDEDMNDLFRSFLVDGEDLLAVSGNXXXXXXXXXQAAMAAPSDLSPPAGFCLRVGV-----------------SAGGGGGGVRVXXXXXXXXXXXXXXPMRRRANTSPDCEDIATSSTP 541
            A+DAAQNWPGCFRHVARCRRLNKEEVVLILSDPLKFGLVRT+VLPAEGI+NGTVYLCSKDRVRVLKHDGIDYVKRNAAQGSNRIREDVVKMKVNGRHAVNSYSSRGSGSACFWRRRYALEPPSV   G  R                Q VTWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGRG QLP DGNLFLP SRR+SRREDLA      XXXXXXXXXXXX                               S+   S +   G   GGGG GG       WVG   KV PGAR                    GP D R A + N VW G       D+YAM               G         +R+ M SP   R   GE  P S +  W+ KK   A   XXX AA LN   F D+++ GL EFEGLG GD N GANGSNTDEDM+DLFRSFLVDGEDLL VS           Q++   P +L+PP+GF LRVG                  S+G   GG   XXX            MRRRANTSP+C+D  T   P
Sbjct:   15 AEDAAQNWPGCFRHVARCRRLNKEEVVLILSDPLKFGLVRTEVLPAEGIANGTVYLCSKDRVRVLKHDGIDYVKRNAAQGSNRIREDVVKMKVNGRHAVNSYSSRGSGSACFWRRRYALEPPSVPGPGGGRSH--------------QTVTWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGRGAQLPPDGNLFLPASRRESRREDLAXXXXXXXXXXXXXXXXXX-------------------------------SAQEGSSQFARGVLGGGGGTGG-------WVG---KVLPGARGGXXXXXXXXXXXXXXXXXXGPVDVRAAALRNNVWVG---TGGSDIYAMNVNGSSRKGPGRGGRGREATEGISPMRSDMSSPHTPR---GEPEPASGLPLWDPKKMAGAQXXXXXXAACLNPTAFGDDEMVGLAEFEGLGAGDTNPGANGSNTDEDMHDLFRSFLVDGEDLLTVSSQGNHSSGS--QSSSVHP-ELTPPSGFLLRVGSGXXXXXXXXXXXLGSGSSSGSRFGGXXXXXXYDANGSLGG---MRRRANTSPECDDKVTGPIP 526          
BLAST of mRNA_M-pyrifera_M_contig6763.16327.1 vs. uniprot
Match: A0A6H5KVR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR6_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 3.990e-77
Identity = 244/502 (48.61%), Postives = 269/502 (53.59%), Query Frame = 0
Query:   91 MKVNGRHAVNSYSSRGSGSACFWRRRYALEPPSVAPNGSSRGXXXXXXXXXXXXXXXQNVTWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGRGTQLPRDGNLFLPPSRRDSRREDLATQAVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLSSLVTVSSCPSSVKKEEGCFRGGGGLGGANDCGGGWVGGSGKVAPGARSNGGRYGAGGG------------------------PQDARGATVHNTVWAGGXXXXXXDLYAMXXXXXXHVXXXXDVAG---------IRASMPSPPGNRQGGGEGGPGSTVAFWETKKGMEAHHQXXX-AAALNAGGFADEDIGGLEFEGLGVGDVNGGANGSNTDEDMNDLFRSFLVDGEDLLAVSGNXXXXXXXXXQAAMAAPSDLSPPAGFCLRVGV-----------------SAGGGGGGVRVXXXXXXXXXXXXXXPMRRRANTSPDCEDIATSSTP 541
            MKVNGRHAVNSYSSRGSGSACFWRRRYALEPPSV   G  R                Q VTWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGRG QLP DGNLFLP SRR+SRRE         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           +    PS+  K+EG      G+ G     GGWVG   KV PGAR         GG                        P D R A + N VW G       D+Y M               G         +R+ M SP   R   GE  P S +  W+ KK   A   XXX AA LN   F D+++       +G+GD N GANGSNTDEDM+DLFRSFLVDGEDLL VS           Q++   P +L+PP+GF LRVG                  S+G   GG   XXX            MRRRANTSP+C+D  T   P
Sbjct:    1 MKVNGRHAVNSYSSRGSGSACFWRRRYALEPPSVPGPGGGRSH--------------QTVTWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGRGAQLPPDGNLFLPASRRESRREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------SPPRTPSAGIKQEGSSHFARGVLGGGGGAGGWVG---KVLPGAR---------GGXXXXXXXXXXXXXXXXXXXXXXXXPADVRAAALRNNVWVG---TSGGDMYTMNVNGSSRKGPGRGGRGREATEGISPMRSDMSSPQTPR---GEPEPASGLPLWDPKKMAGAQXXXXXXAACLNPTAFGDDEM-------VGLGDTNPGANGSNTDEDMHDLFRSFLVDGEDLLTVSSQGNHSSGS--QSSSVHP-ELTPPSGFLLRVGSGXXXXXXXXXXXLGSGSSSGSRFGGXXXXXXYDANGSLGG---MRRRANTSPECDDKVTGPIP 446          
BLAST of mRNA_M-pyrifera_M_contig6763.16327.1 vs. uniprot
Match: A0A835YS93_9STRA (CG-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS93_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.300e-11
Identity = 61/192 (31.77%), Postives = 84/192 (43.75%), Query Frame = 0
Query:    3 DAAQNWPGCFRHVARCRRLNKEEVVLILSDPLKFG--LVRTDVLPAEGISNGTVYLCSKDRVRVLKHDGIDYVKRNAAQGSNRIREDVVKMKVNGRHAVNSYSSRGSGSACFWRRRYALEPPSVAPNGSSRGXXXXXXXXXXXXXXXQNVTWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGR 192
            D  + W  C RHVA+CR L  +E+++ILS    +G  LV     P E   +G + LC+   V  L+ DGI++VKR     + ++RED V +K+NG  AV    +         RRRY L                                 G  LVHYLD   A     +SP  A  +A+PLT +  W  R
Sbjct:   39 DRWRAWRACVRHVAKCRWLTLQELLVILSRYHAYGIPLVTCHARPPE---SGALLLCATKDVSALRQDGIEWVKR---PNTKKVREDHVSLKLNGAVAVRGSYTHAVHPPTLHRRRYTLGETDA----------------------------GVTLVHYLDVARAEARRAQSPH-ADLIAQPLT-DRAWLAR 194          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6763.16327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNU1_ECTSI3.180e-15055.79CG-1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KVR6_9PHAE3.990e-7748.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YS93_9STRA2.300e-1131.77CG-1 domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005559CG-1 DNA-binding domainPFAMPF03859CG-1coord: 19..121
e-value: 1.9E-9
score: 37.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6763contigM-pyrifera_M_contig6763:744..8751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6763.16327.1mRNA_M-pyrifera_M_contig6763.16327.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6763 744..8751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6763.16327.1 ID=prot_M-pyrifera_M_contig6763.16327.1|Name=mRNA_M-pyrifera_M_contig6763.16327.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=541bp
ADDAAQNWPGCFRHVARCRRLNKEEVVLILSDPLKFGLVRTDVLPAEGIS
NGTVYLCSKDRVRVLKHDGIDYVKRNAAQGSNRIREDVVKMKVNGRHAVN
SYSSRGSGSACFWRRRYALEPPSVAPNGSSRGGAGGGRGGGGGGGHHQNV
TWGDQLVHYLDDEEARGFARRSPFGAAGVARPLTSEECWRGRGTQLPRDG
NLFLPPSRRDSRREDLATQAVAGAAAAAAAAVSAAAVAVVPSSDTSGQSS
PSSGGGDKCLSSLVTVSSCPSSVKKEEGCFRGGGGLGGANDCGGGWVGGS
GKVAPGARSNGGRYGAGGGPQDARGATVHNTVWAGGGGNGGNDLYAMNGG
GNGHVGGGGDVAGIRASMPSPPGNRQGGGEGGPGSTVAFWETKKGMEAHH
QQAAAAALNAGGFADEDIGGLEFEGLGVGDVNGGANGSNTDEDMNDLFRS
FLVDGEDLLAVSGNNNNNHSGGSQAAMAAPSDLSPPAGFCLRVGVSAGGG
GGGVRVGGGGGGYEADGGSGPMRRRANTSPDCEDIATSSTP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005559CG-1_dom