prot_M-pyrifera_M_contig67051.16228.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig67051.16228.1
Unique Nameprot_M-pyrifera_M_contig67051.16228.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length73
Homology
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: A0A6H5L1F8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1F8_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 7.910e-29
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLKKYSDLV 58
            VTKAVWAYIRAESLQDPKDGRKIRND+KMFRVFKCKTM+MM IAKKLSPHLKK SDLV
Sbjct:  120 VTKAVWAYIRAESLQDPKDGRKIRNDEKMFRVFKCKTMNMMHIAKKLSPHLKKVSDLV 177          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: D7G2V1_ECTSI (SWIB/MDM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V1_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.560e-28
Identity = 58/73 (79.45%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLKKYSDLVGAEAVGGGGGGKCDS 73
            VTKAVWAYIRAESLQDPKD RKIRNDDKMF VFKCKTM+MM IAKKLSPHLKK SDLV  E+ GG  G + D+
Sbjct:   56 VTKAVWAYIRAESLQDPKDRRKIRNDDKMFPVFKCKTMNMMHIAKKLSPHLKKLSDLV--ESGGGAPGEEVDT 126          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: A0A1L0BPF9_9ASCO (CIC11C00000000240 n=1 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0BPF9_9ASCO)

HSP 1 Score: 59.3 bits (142), Expect = 5.500e-9
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0
Query:    1 VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLKKYSDLVGAE 61
            V K +W YI+   LQDPKD RK++ D+K+  VFK   + M ++ K L  HL K  DLV  E
Sbjct:   95 VVKQIWVYIKEHGLQDPKDKRKVKCDEKLQAVFKKLVVGMFEMNKLLGNHLYKDEDLVDGE 155          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: UPI001E464649 (SWIB/MDM2 domain-containing protein n=1 Tax=Sphingobium sp. Cam5-1 TaxID=2789327 RepID=UPI001E464649)

HSP 1 Score: 55.5 bits (132), Expect = 1.630e-8
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLK 52
            V K +WAYI+   LQ+PKD R+I  DDK+ ++F  K  SM ++ K L+ HLK
Sbjct:   25 VVKKIWAYIKTNDLQNPKDKREILADDKLEKIFGGKKASMFEMNKHLAKHLK 76          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: A0A6V1PA97_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PA97_HETAK)

HSP 1 Score: 58.2 bits (139), Expect = 3.410e-8
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLKKYSDLVG 59
            V K +WAYI+   LQ+P+D R+I  DD++  +FK K ++M ++ K L+ H+K Y DL G
Sbjct:  151 VVKQMWAYIKENDLQNPRDKREILCDDQLQAIFKRKKINMFKMNKVLAGHMKTYEDLGG 209          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: A0A7N2MYS9_QUELO (Uncharacterized protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2MYS9_QUELO)

HSP 1 Score: 58.2 bits (139), Expect = 3.730e-8
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHL 51
            V K VWAYIR  +LQDPK+ R IR D+ +  +F+ KT++M Q+ K LS H+
Sbjct:  151 VVKKVWAYIRENNLQDPKNRRNIRCDESLHTLFRVKTINMFQMNKALSKHI 201          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: UPI001AE05434 (SWIB/MDM2 domain-containing protein n=1 Tax=Roseomonas sp. SG15 TaxID=2820811 RepID=UPI001AE05434)

HSP 1 Score: 55.5 bits (132), Expect = 3.730e-8
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLK 52
            V   VWAYI+A  LQ+PKDGR+I  DDK+  VF    ++M ++ K L+ HLK
Sbjct:   62 VVSKVWAYIKANKLQNPKDGREILADDKLREVFGKDKVTMFEMNKHLAQHLK 113          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: A0A1M6N0A0_9PROT (SWIB/MDM2 domain-containing protein n=1 Tax=Roseomonas rosea TaxID=198092 RepID=A0A1M6N0A0_9PROT)

HSP 1 Score: 55.1 bits (131), Expect = 4.940e-8
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    5 VWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLK 52
            VWAYI+A  LQ+PKDGR+I  DDK+ +VF    ++M ++ K L+ HLK
Sbjct:   63 VWAYIKANKLQNPKDGREILADDKLRKVFGKDKVTMFEMNKHLAQHLK 110          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: A0A519E786_PSESP (SWIB/MDM2 domain-containing protein n=1 Tax=Pseudomonas sp. TaxID=306 RepID=A0A519E786_PSESP)

HSP 1 Score: 55.1 bits (131), Expect = 5.160e-8
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    5 VWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLK 52
            VWAYI+A  LQ+PKDGR+I  DDK+ +VF    ++M ++ K L+ HLK
Sbjct:   65 VWAYIKANKLQNPKDGREILADDKLRKVFGKDKVTMFEMNKHLAQHLK 112          
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Match: A0A6P3Z719_ZIZJJ (upstream activation factor subunit spp27-like n=4 Tax=cellular organisms TaxID=131567 RepID=A0A6P3Z719_ZIZJJ)

HSP 1 Score: 55.1 bits (131), Expect = 5.270e-8
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    5 VWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPHLK 52
            VWAYI+A  LQ+PKDGR+I  DDK+ +VF    ++M ++ K L+ HLK
Sbjct:   66 VWAYIKANKLQNPKDGREILADDKLRKVFGKDKVTMFEMNKHLAQHLK 113          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67051.16228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1F8_9PHAE7.910e-2993.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2V1_ECTSI1.560e-2879.45SWIB/MDM2 domain-containing protein n=1 Tax=Ectoca... [more]
A0A1L0BPF9_9ASCO5.500e-945.90CIC11C00000000240 n=1 Tax=[Candida] intermedia Tax... [more]
UPI001E4646491.630e-848.08SWIB/MDM2 domain-containing protein n=1 Tax=Sphing... [more]
A0A6V1PA97_HETAK3.410e-844.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7N2MYS9_QUELO3.730e-850.98Uncharacterized protein n=5 Tax=Fagaceae TaxID=350... [more]
UPI001AE054343.730e-850.00SWIB/MDM2 domain-containing protein n=1 Tax=Roseom... [more]
A0A1M6N0A0_9PROT4.940e-852.08SWIB/MDM2 domain-containing protein n=1 Tax=Roseom... [more]
A0A519E786_PSESP5.160e-852.08SWIB/MDM2 domain-containing protein n=1 Tax=Pseudo... [more]
A0A6P3Z719_ZIZJJ5.270e-852.08upstream activation factor subunit spp27-like n=4 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019835SWIB domainSMARTSM00151swib_2coord: 1..56
e-value: 1.1E-8
score: 44.9
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10coord: 1..58
e-value: 8.5E-18
score: 66.1
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 1..57
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 1..51
e-value: 3.3E-16
score: 58.9
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67051contigM-pyrifera_M_contig67051:224..442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67051.16228.1mRNA_M-pyrifera_M_contig67051.16228.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig67051 224..442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig67051.16228.1 ID=prot_M-pyrifera_M_contig67051.16228.1|Name=mRNA_M-pyrifera_M_contig67051.16228.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp
VTKAVWAYIRAESLQDPKDGRKIRNDDKMFRVFKCKTMSMMQIAKKLSPH
LKKYSDLVGAEAVGGGGGGKCDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019835SWIB_domain
IPR036885SWIB_MDM2_dom_sf
IPR003121SWIB_MDM2_domain