prot_M-pyrifera_M_contig6702.16219.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6702.16219.1
Unique Nameprot_M-pyrifera_M_contig6702.16219.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length565
Homology
BLAST of mRNA_M-pyrifera_M_contig6702.16219.1 vs. uniprot
Match: D8LI68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI68_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 5.580e-103
Identity = 301/587 (51.28%), Postives = 359/587 (61.16%), Query Frame = 0
Query:    1 QVARLKAISAELQVQVDDLNDERVRLLKKLRDGA-ASAAISSAATSEGVLGS-GERGDGGREPNKEAEQLTGAVKRLALEVERRDAQIEKLEKSLLTLGGEDAVFSREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------DTLSAPPAVEEMDRLERENRSLREALTAMS--SGRGXXXXXXXXNTAADGIRIVAEAEAGVGVEAEEKKVAEXXXXTAAELQQQAADDRVEQLTRVNESIVRKLQELMDRRDTPREVARRGGRASAXXXXXXXXXXXXXXXXXXXXXXRGKESGKPAA-VQVDMQRLIMEMGDLRRLVAGGFAKNSSSDNNVATASSRSQAQPGTNALYPPVSTKNGDGXXXXXXXXXXXNGATEWAVEGDRGVAAAGARAVGXXXXGSLEEEAVGTRGGXXXXXVPAPAAGTAEPFT-RPRRM--PQTVQGQEALRSRLRRLNLPAEGWAEEVRDVYAQLVETLEQLQAREVELDEHEELIARYETHLSDMRAQAATLYREHADREKEWXXXXXXXXXXXXXXXEERDAFAIRSRRLEEVLDAEDSGAADDPAAPHR 565
            +VAR+ A++AELQ QVDDLNDERVRLLKKLRDGA A +   +   +EG  G   ER       + EA QL+ AVKRLALE+ RRDAQIEKLE+SLL+LGG D  F+                     XXXXXXXXXXXXXXXXXX              +     P+ EE+D+L +ENRSLREALTAM+  SG G         TA DG       + G      +++ A      +++LQQ+AAD RVEQLTRVNE+I+R+LQ LM R+D+PRE ARR  RA      XXXXXXXXXXXXX     + K+  +PAA VQ DMQRLI EMGDLR+LVAGGFA       N A A+      PGT   +P   + +GDG             AT  A    RG AA G    G    G+  EEA    GG     VPAPA G+AE F+ +P++   P+T QGQEALR +LRRLNLP E WAE+VR++ AQLVE LEQL+ RE ELDEHEELI RYE +LSDMRAQ A LYR+HADREKE+               EERDA A+R+RRL+EVLD ED  AADDP APHR
Sbjct:  464 EVARMTAVAAELQTQVDDLNDERVRLLKKLRDGAGAGSGAPTHGAAEGRQGDEDERRQQNTSSDGEAAQLSEAVKRLALEISRRDAQIEKLERSLLSLGGNDPTFTERGGAGAGNPTAAEAGTDPASXXXXXXXXXXXXXXXXXXXXXXXXXXGGNVAEEGAGVLPSREELDQLTKENRSLREALTAMAVKSGAGDARA-----TAGDGSGKPTPVDGGAEEAGAKEQRAVEEMEASSKLQQEAADKRVEQLTRVNETIMRQLQTLMARKDSPREAARRASRAVGGGRAXXXXXXXXXXXXXD----KDKDKSEPAAAVQADMQRLIAEMGDLRQLVAGGFANK-----NTAKAA----RNPGTVPSHPRGVSGDGDGGGVVPSDFHAP--ATTGA---SRGEAAGGEGVRGMKEGGTTLEEA---EGGGRGGGVPAPATGSAEEFSEKPQQQGGPKTAQGQEALRWQLRRLNLPPEEWAEDVRNINAQLVEALEQLREREAELDEHEELIVRYERNLSDMRAQVAALYRDHADREKEFDEKQKASKAEAGVLREERDALAVRARRLQEVLDVEDE-AADDPTAPHR 1023          
BLAST of mRNA_M-pyrifera_M_contig6702.16219.1 vs. uniprot
Match: A0A6H5KTB3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB3_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 8.350e-22
Identity = 89/182 (48.90%), Postives = 106/182 (58.24%), Query Frame = 0
Query:  311 MGDLRRLVAGGFAKNSSSDNNVATASSRSQAQPGTNALYPPVSTKNGDGXXXXXXXXXXXNGATEWAVEGDRGVAAAGARAVGXXXXGSLEEEAVGTRGGXXXXXVPAPAAGTAEPFT-RPRRM--PQTVQGQEALRSRLRRLNLPAEGWAEEVRDVYAQLVETLEQLQAREVELDEHEELI 489
            MGDLR+LVAGGFA       N A A+      PGT   +P   + +GDG             AT  A    R  AAAG    G    G+  EEA    GG     VPAPA G+AE F+ +P++   P+T QGQEALR +LRRLNLP E WAE+VR++ AQLVE LEQL+ RE ELDEHEELI
Sbjct:    1 MGDLRQLVAGGFANK-----NTAKAA----RNPGTVPSHPLAVSGDGDGGGVMPSDFPAP--ATTGA---SREEAAAGNGVRGMKEDGTTLEEA---EGGGSGGNVPAPATGSAEEFSEKPQQQWGPKTAQGQEALRWQLRRLNLPPEEWAEDVRNINAQLVEALEQLREREAELDEHEELI 165          
BLAST of mRNA_M-pyrifera_M_contig6702.16219.1 vs. uniprot
Match: A0A7S3URL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URL0_HETAK)

HSP 1 Score: 92.4 bits (228), Expect = 4.440e-19
Identity = 51/80 (63.75%), Postives = 56/80 (70.00%), Query Frame = 0
Query:  432 RMPQTVQGQEALRSRLRRLNLPAEGWAEEVRDVYAQLVETLEQLQAREVELDEHEELIARYETHLSDMRAQAATLYREHA 511
            R P T  G++ L  RLRRL LP E WAEEVR+  AQLV  LE L  RE ELD+HEEL+ RYE HLS MR Q A LYREHA
Sbjct:   10 RTPMTAAGKQLLAERLRRLRLPPEEWAEEVREANAQLVAALEDLALRERELDDHEELVRRYEEHLSGMRQQVAVLYREHA 89          
BLAST of mRNA_M-pyrifera_M_contig6702.16219.1 vs. uniprot
Match: A0A835Z5T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5T3_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.110e-12
Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = 0
Query:  447 LRRLNLPAEGWAEEVRDVYAQLVETLEQLQAREVELDEHEELIARYETHLSDMRAQ 502
            LR+LNLP E WA EVRD+ AQLVE LEQL ARE ELDEHEEL+  YETHL DMRAQ
Sbjct:    6 LRKLNLPPEEWANEVRDLNAQLVEALEQLSAREAELDEHEELLRHYETHLGDMRAQ 61          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6702.16219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LI68_ECTSI5.580e-10351.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTB3_9PHAE8.350e-2248.90Reverse transcriptase domain-containing protein n=... [more]
A0A7S3URL0_HETAK4.440e-1963.75Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z5T3_9STRA3.110e-1276.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 458..502
NoneNo IPR availableCOILSCoilCoilcoord: 2..29
NoneNo IPR availableCOILSCoilCoilcoord: 507..534
NoneNo IPR availableCOILSCoilCoilcoord: 155..175
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
NoneNo IPR availableCOILSCoilCoilcoord: 204..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6702contigM-pyrifera_M_contig6702:6493..13588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6702.16219.1mRNA_M-pyrifera_M_contig6702.16219.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6702 6493..13588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6702.16219.1 ID=prot_M-pyrifera_M_contig6702.16219.1|Name=mRNA_M-pyrifera_M_contig6702.16219.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=565bp
QVARLKAISAELQVQVDDLNDERVRLLKKLRDGAASAAISSAATSEGVLG
SGERGDGGREPNKEAEQLTGAVKRLALEVERRDAQIEKLEKSLLTLGGED
AVFSREAAAAGEERGGGGGGDDPRASLASVPPSNSDAAAAAAADTLSAPP
AVEEMDRLERENRSLREALTAMSSGRGKGDGGDGDNTAADGIRIVAEAEA
GVGVEAEEKKVAEAERKTAAELQQQAADDRVEQLTRVNESIVRKLQELMD
RRDTPREVARRGGRASASVAAAASAAAAAAAAAGGAEGGRGKESGKPAAV
QVDMQRLIMEMGDLRRLVAGGFAKNSSSDNNVATASSRSQAQPGTNALYP
PVSTKNGDGGGGGGGEDDGGNGATEWAVEGDRGVAAAGARAVGVGVGGSL
EEEAVGTRGGGEGIGVPAPAAGTAEPFTRPRRMPQTVQGQEALRSRLRRL
NLPAEGWAEEVRDVYAQLVETLEQLQAREVELDEHEELIARYETHLSDMR
AQAATLYREHADREKEWEERQKAYRQEAEGLREERDAFAIRSRRLEEVLD
AEDSGAADDPAAPHR
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