mRNA_M-pyrifera_M_contig66943.16210.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: A0A2R5GVZ5_9STRA (Thymidine kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVZ5_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.300e-15 Identity = 68/204 (33.33%), Postives = 94/204 (46.08%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSGGVFVLKHALDAPRDGPKRLRSRTGL--VLEGVELADDSSLELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRLQEEPLVQTDDENSRVLVGGAESYQPSCVD 621
++ MGPMFSGK+++L++ +ED P F G V K + D + + TG + A LEL P N L A+DEG FF D L + V + + ++GLD DFR +G + LA A P VE L A C H C A F+ R+ ++VLVGGAESYQP+C +
Sbjct: 65 RVIMGPMFSGKTSRLLQLLEDLEPQF-GRCLVAKWSEDLRAGSLSAVSTHTGKRRTSDVHAFASLDDLEL-PGHQNLLVAVDEGQFFGDDLLRLHDRIVRAEQHHALIVAGLDLDFRKNPFGRMLDLADRA------DPTNVET--LAAQC-----------HICGAAAPFTSRIVHSA--------NQVLVGGAESYQPTCAE 239
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: A0A5A8CEX9_CAFRO (Thymidine kinase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CEX9_CAFRO) HSP 1 Score: 81.3 bits (199), Expect = 4.750e-15 Identity = 59/164 (35.98%), Postives = 85/164 (51.83%), Query Frame = 1
Query: 19 IFMGPMFSGKSAKLIRAIEDARPMFSGGVF----------VLKHALDAPRDGPKRLRSRTGLVLEGVELADDSSLELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAR----EALLGSSIAPKT-VEVVRLTASCS 465
+FMGPM+SGK+++++RA+ AR G F V + +D R P + SR GL G + SL+ + P + A DE FF +L W+ V + +G +SGLDRDFRG +G V AL+R +A +GS A VEV RL + C+
Sbjct: 6 VFMGPMYSGKTSEMLRAVRAAR---QSGAFTTDDGVRKLTVARSRMDT-RSPPGAVVSRDGLEERGEHVLVVDSLDELEVVPGGMVACDEAQFFGDGSLLRLWERVAAQQGA-LLVSGLDRDFRGRPFGDVLALSRLHLGDAAVGSGAAGDALVEVRRLVSRCA 164
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: A0A6L7VQQ1_9GAMM (Thymidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L7VQQ1_9GAMM) HSP 1 Score: 70.9 bits (172), Expect = 1.350e-11 Identity = 62/205 (30.24%), Postives = 88/205 (42.93%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSGG-VFVLKHALDAPRDGPKRLRSRTGLVLEGVELADDSSLELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRLQEEPLVQTDDENSRVLVGGAESYQPSCVDCH 627
++ G MFSGKS +LIR I R + +G V + K LD G ++ S G ++ ++D + L + AIDE F + + + G + G D DFRGE +G + AL A EV +LTA C C + A +QRL + D + VGGAESY+ C DCH
Sbjct: 8 EVVTGVMFSGKSEELIRRIR--RALIAGRQVQLFKSHLDDRYSGKFQISSHDGRTIDAEPISDSNELRAKILPTTEVVAIDEAQFLDDGITQVV--ELLAMAGKRVIVVGTDMDFRGEPFGPMGALLARA----------EEVTKLTAICVV-----------CGERATRNQRLIDGKPATVD--GPTIQVGGAESYEARCRDCH 185
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: UPI00047FA3E4 (thymidine kinase n=1 Tax=Mycoplasma testudinis TaxID=33924 RepID=UPI00047FA3E4) HSP 1 Score: 68.9 bits (167), Expect = 9.290e-11 Identity = 62/208 (29.81%), Postives = 96/208 (46.15%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSGGVFVLKHALDAPRDGPKRLRSRTGLVLEGVELADDSSL-ELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRL---QEEPLVQTDDENSRVLVGGAESYQPSCVDCH 627
++ GPMF+GKS +LIR I R V K +D+ G + SR G ++ + ++D + + V + L AIDE FF + +E + G ++GL+RDF+GE +G +PAL +IA + + +LTA C+ C A SQRL +E P + ++L+G ESY C H
Sbjct: 15 EVICGPMFAGKSEELIRKINRVR-YAEVNFLVFKPLVDSRSKG---VESRDGRYVDAIVVSDAYKIYDHVDEKHPDLVAIDEAQFFGNEIIEVV--QTLADNGINVLIAGLERDFKGEPFGPIPALL-------TIAER---ITKLTAICTE-----------CGAEATRSQRLIDGKEAPY-----NSPQILIGNQESYTARCRHHH 190
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: A0A3N5P936_9CHLR (Thymidine kinase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3N5P936_9CHLR) HSP 1 Score: 68.2 bits (165), Expect = 1.180e-10 Identity = 63/204 (30.88%), Postives = 94/204 (46.08%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSGGVFVLKHALDAPRDGPKRLRSRTGLVLEGVELADDSSLELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRLQEEPLVQTDDENSRVLVGGAESYQPSCVDCH 627
++ G MFSGK+ ++IR + AR + V V K LD R +R+ S GL E + + + + + A+DE FF + + + + + +G L+GLD DFRGE +G +P L EA EV +L A C C A +QRL + DD + +LVGG+ESY+ C CH
Sbjct: 11 EVVCGSMFSGKTEEVIRRVRRAR-IARQQVQVFKPVLDN-RYYTERVSSHNGLQWEAIPVGNAREILERLDPETTVVAVDEAQFFDWE-ISAVCRELAE-RGLRVILAGLDMDFRGEPFGPMPLLMAEA----------EEVTKLQAICVV-----------CGAPASRTQRLIDGEPAAYDD--AVILVGGSESYEARCRQCH 187
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: UPI00051B47F8 (thymidine kinase n=1 Tax=Mycoplasma alvi TaxID=78580 RepID=UPI00051B47F8) HSP 1 Score: 67.4 bits (163), Expect = 3.360e-10 Identity = 69/214 (32.24%), Postives = 96/214 (44.86%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSG-GVFVLKHALDAPRDGPKRLRSRTGLVLEGVELAD--DSSLELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRL-------QEEPLVQTDDENSRVLVGGAESYQPSCVDCH 627
++ GPMF+GKS +LIR + R F+ V K +D+ K +RSR G + + + D D + RP+ L AIDE FF + +E + G ++GLDRDFRGE +G +PAL +IA K V +LTA C+ C A +QRL E PL+ L+G ESY C H
Sbjct: 15 EVICGPMFAGKSEELIRRVN--RWSFANIKCLVFKPDVDSRN---KDVRSRDGRHIAAITIHDPYDMYKHVDTQRPD-LVAIDEVQFFGDEIIEIV--QTFADNGINVLVAGLDRDFRGEPFGSIPALL-------TIAEK---VTKLTAICTE-----------CGAEASRTQRLINGNPAPYESPLI---------LIGNQESYTARCRHHH 190
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: UPI000484704A (thymidine kinase n=1 Tax=Mycoplasma pirum TaxID=2122 RepID=UPI000484704A) HSP 1 Score: 67.4 bits (163), Expect = 3.460e-10 Identity = 65/207 (31.40%), Postives = 94/207 (45.41%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSG-GVFVLKHALDAPRDGPKRLRSRTGLVLEGVELADDSSL-ELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRL-QEEPLVQTDDENSRVLVGGAESYQPSCVDCH 627
++ GPMF+GKS +L+R I R F+ V K ++D + ++SR G E + + D L V L AIDE FF + +E + G ++GLDRDFRGE +G +PAL +IA K + +LTA C+ C A +QRL +P E+ +L+G ESY C H
Sbjct: 15 EVICGPMFAGKSEELLRRIN--RMSFANVKCLVFKPSIDTRN---RDVKSRDGRSAEAIIIEDPYELYSYVQKERPDLVAIDEVQFFGKEIIEIV--QTFADNGINVLVAGLDRDFRGEPFGSIPALL-------TIAEK---ITKLTAICTE-----------CGAEASRTQRLINGKPAPY---ESQLILIGNQESYTARCRHHH 190
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: A0A1M2YH98_9ARCH (Thymidine kinase n=4 Tax=Archaea TaxID=2157 RepID=A0A1M2YH98_9ARCH) HSP 1 Score: 65.9 bits (159), Expect = 6.980e-10 Identity = 62/208 (29.81%), Postives = 99/208 (47.60%), Query Frame = 1
Query: 19 IFMGPMFSGKSAKLIRAIEDARPMFSGG-VFVLKHALDAPRDGPKRLRSRTGLVLEGVEL----ADDSSLELVPCRPNALYAIDEGHFFHPDA-LESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRLQEEPLVQTDDENSRVLVGGAESYQPSCVDC 624
+ GPMFSGK+++LI +E R F+G V + K +D R ++++ G L+ + A ++ V N + IDE F+ D+ LE + S K Y+S L++D+RG +P E LL + + LTA C++ C + AVFSQR+ + T R+++GG E+YQP C +C
Sbjct: 2 VITGPMFSGKTSRLIELLE--RERFAGRKVILFKPEIDT-RSVESKVKTHKGAELDATVVRTGKAGVKAIFDVSSDYNVI-GIDEAQFWDDDSGLEDTLNKLASMKKI-VYVSTLNKDYRG-----IPFNISEKLLAYADY-----IYSLTAVCTK-----------CGEEAVFSQRM----IDGTSKSGPRIVIGGKEAYQPRCRNC 179
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: A0A6B0YXE0_9CHLR (Thymidine kinase n=2 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6B0YXE0_9CHLR) HSP 1 Score: 65.1 bits (157), Expect = 1.950e-9 Identity = 61/205 (29.76%), Postives = 96/205 (46.83%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSGGVFVLKHALDAPRDGPKRLRSRTGLVLEGVELADDSSLELVPC-RPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRLQEEPLVQTDDENSRVLVGGAESYQPSCVDCH 627
++ G MFSGK+ +L+R + + + + + K +D R G L S G+ V + +D++ L R + AIDE FF+P A+ + + +G +GLD+DFRGE +G +P L A V +L A C + C A +QRL + + D+ +LVGG+ESY+ C DCH
Sbjct: 11 ELICGSMFSGKTEELLRRVRRSE-IARRRIQLFKPQIDN-RYGRDLLASHNGMSRGDVVILEDTASLLTRVKRGTEVVAIDEVQFFNP-AVAGICQELAD-QGKQVIAAGLDQDFRGEPFGPIPLLMALA----------ERVDKLHAICVQ-----------CGSPATRTQRLIDGKPARYDE--PIILVGGSESYEARCRDCH 188
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Match: UPI001C3240FB (Thymidine kinase n=1 Tax=Tenericutes bacterium TaxID=2231116 RepID=UPI001C3240FB) HSP 1 Score: 63.2 bits (152), Expect = 9.180e-9 Identity = 58/204 (28.43%), Postives = 92/204 (45.10%), Query Frame = 1
Query: 16 KIFMGPMFSGKSAKLIRAIEDARPMFSGGVFVLKHALDAPRDGPKRLRSRTGLVLEGVELADDSSLELVPCRPNALYAIDEGHFFHPDALESFWKSVTSTKGTGFYLSGLDRDFRGEEWGGVPALAREALLGSSIAPKTVEVVRLTASCSRVLKGKRGKEHRCDKHAVFSQRLQEEPLVQTDDENSRVLVGGAESYQPSCVDCH 627
++ GPMF+GK+ +L+R I+ + V K +D R G + S + + ++ + + + AIDE F +A+E + KG +SGLDR+FRGEE+ +P+L S+A V +LTA C + C A +QR+ + DD +LVG +SY+ C DCH
Sbjct: 11 EVITGPMFAGKTEELLRRIKRLE-YAKQNIIVFKPTIDN-RYGEGHVVSHDHNKTQSINISKAKEILKYVNKDTQVVAIDEIQFLDEEAVEIC--EYLADKGIRVIVSGLDRNFRGEEFSFMPSLL-------SLAEY---VTKLTAICVK-----------CQTPASRTQRIINGKPAKYDD--PIILVGEKDSYEARCRDCH 187 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66943.16210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig66943.16210.1 >prot_M-pyrifera_M_contig66943.16210.1 ID=prot_M-pyrifera_M_contig66943.16210.1|Name=mRNA_M-pyrifera_M_contig66943.16210.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp MSRATKIFMGPMFSGKSAKLIRAIEDARPMFSGGVFVLKHALDAPRDGPKback to top mRNA from alignment at M-pyrifera_M_contig66943:261..887- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig66943.16210.1 ID=mRNA_M-pyrifera_M_contig66943.16210.1|Name=mRNA_M-pyrifera_M_contig66943.16210.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=627bp|location=Sequence derived from alignment at M-pyrifera_M_contig66943:261..887- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig66943:261..887- >mRNA_M-pyrifera_M_contig66943.16210.1 ID=mRNA_M-pyrifera_M_contig66943.16210.1|Name=mRNA_M-pyrifera_M_contig66943.16210.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig66943:261..887- (Macrocystis pyrifera P11B4 male)back to top |