mRNA_M-pyrifera_M_contig6688.16189.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: D7FZE6_ECTSI (Eukaryotic translation initiation factor 3 subunit L n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZE6_ECTSI) HSP 1 Score: 493 bits (1268), Expect = 2.330e-171 Identity = 241/278 (86.69%), Postives = 255/278 (91.73%), Query Frame = 1
Query: 1 SIPANREETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRS--DSDEPEDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPS-NVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARILNE 825
S P N+EETQSLDFLLPE+VKDFVFDLHD+MRRAKRV ELEPLYN+ FK +TDAYFKGSTWPEAEVI NQCSNDELFLCFYRELRNRH+FATTN Q DYL SWENYCRLFDALLDC DTNFVITE WAFDLVHEFVYQFQSFCQM+GQRR +E EDAWAVQNVIGYLHGLIKVSNI+P L+AK+RP+ NVAVPAAPSQLHQM GYFAIVGMSRLQCLLGDYYECIKVLEAIDITDK+ LFA NMLAFVTVHQHAGLAFLMLKRYKDAARIL+E
Sbjct: 28 STPQNKEETQSLDFLLPESVKDFVFDLHDAMRRAKRVDELEPLYNTTFKAVTDAYFKGSTWPEAEVIANQCSNDELFLCFYRELRNRHMFATTNVQMPDYLRSWENYCRLFDALLDCRDTNFVITEEWAFDLVHEFVYQFQSFCQMKGQRRGGESEEELEDAWAVQNVIGYLHGLIKVSNIMPILEAKKRPAANVAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNELFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILSE 305
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A835YSE4_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE4_9STRA) HSP 1 Score: 288 bits (738), Expect = 8.370e-92 Identity = 136/268 (50.75%), Postives = 182/268 (67.91%), Query Frame = 1
Query: 22 ETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEPEDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARILNE 825
E + LDF + VKDFVFDLHD+MRR+ ++ ELE LY F+KL+D Y+K WP A+VI NQC D++FL FY E+R RH+ D +W NYCRLFD LL+C DT+F+IT WAFD+++EFVYQ D WAVQNV+ YLHGLI SNI ++A++ + P +PSQLHQM GY+ ++GMSRL CL+GDY++C+ L +D+TD+ LF SNM A+V+++ H GL+FLMLKRY+DAAR+L+E
Sbjct: 5 EEKPLDFDVVSAVKDFVFDLHDAMRRSLQLEELETLYTVTFRKLSDDYYKIGPWPAADVISNQCGEDQIFLQFYSEMRLRHMNVHLKITIHDRFEAWANYCRLFDVLLECRDTDFIITSTWAFDIINEFVYQ-------------------DVWAVQNVVSYLHGLITKSNIGAIMEARR--TGATAPKSPSQLHQMMGYYGLIGMSRLHCLMGDYHQCLSTLAPLDVTDRSDLFGSNMHAYVSLYMHMGLSFLMLKRYRDAARVLSE 251
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S3XNM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNM3_HETAK) HSP 1 Score: 254 bits (648), Expect = 6.550e-78 Identity = 128/267 (47.94%), Postives = 176/267 (65.92%), Query Frame = 1
Query: 37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSD-TNFVITEGWAFDLVHEFVYQFQSFCQMRGQ--RRSDSD-----EPEDAWAVQNVIGYLHGLIKVSNIVPFLDA---KQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKD 804
DF+LP+ V+DF+F+LH + R + + +++ LY+ +F+ L++AYFK + WP AEV +D LFL FY ELR RHLFAT D L +W +YC LFDALL+ + ++T WAFD+VHEFVYQFQSFCQ R Q RRS++D E AWAVQ+V+ YLH L +VSN+V ++A +Q P P S +H M GYF++VG+SRL+CLLGDY+ ++VL ID DK LF S++ + + H G A LML+RY+D
Sbjct: 59 DFMLPDAVRDFIFNLHQACRETQIMEDIQQLYDGQFRALSEAYFKQAPWPPAEVAARTVGDDPLFLAFYSELRCRHLFATLKITVADRLEAWSHYCELFDALLEAEGGDDLLVTAQWAFDIVHEFVYQFQSFCQFRCQVDRRSEADLAALREAGGAWAVQSVLTYLHRLARVSNVVAIMEAHRHRQPP-----PPGVSNVHLMLGYFSLVGLSRLECLLGDYHAALEVLGPIDTADKSELFTSSLACHLNLFYHTGFAQLMLRRYRD 320
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S2S5S7_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5S7_9STRA) HSP 1 Score: 218 bits (554), Expect = 1.040e-63 Identity = 113/280 (40.36%), Postives = 165/280 (58.93%), Query Frame = 1
Query: 37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYF--KGSTWPEAEVIQNQCSN-----DELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQ-RRSDSDEPE------DAWAVQNVIGYLHGLIKVSNIVPFLDAK---QRPS---NVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARI 816
DF + + +KDFVFD+ S R + R E++ LY +F +L+ Y+ K +TWP + I + DE FLCFY+E+ R+LF +D + +W NYC LFD ++ D V E W FD+++EF+YQFQ+FCQ R R + +E E AWAVQ+V YL LI+VSN+ L+A Q PS +V+ PS+LH GYFAI G+SRL+CLLGDY+ C+ VL+ ID+ ++ ++ ++ H G A+LM++RYKD R+
Sbjct: 11 DFPVNDAIKDFVFDMRQSCRMSLRQDEVDALYGIKFPELSRTYYGEKDATWPGVDAIASMAETKDRTPDEYFLCFYKEMTYRYLFQHGKPSVQDRIDAWNNYCSLFDFVIAAQDVEMVANEQWTFDIINEFIYQFQAFCQYRTDLTRREPEEIEVLKANPSAWAVQSVAMYLKQLIQVSNVTSILEAHRQIQTPSQYIDVSSQTTPSKLHFDLGYFAIFGLSRLECLLGDYHACLSVLDPIDVFSGQEIYHKVFACYLNLYYHMGFAYLMMRRYKDCIRV 290
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S3GPW5_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPW5_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.130e-59 Identity = 105/271 (38.75%), Postives = 159/271 (58.67%), Query Frame = 1
Query: 34 LDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEP-------EDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARILNE 825
+DF LP +KDF+FDLHD+ RR+ R+ E++ LY+++FK++TD YF S WPE +VI ++ NDE FL FYRE+ RH+ Q D++ASW+NY +LFD +L+ + + ++ W D+V EFVYQFQ FCQ R Q S + E DAW + V+ L LI+ S ++ N A P GYFA + ++RL+CL GD+ + + A+ ++D+ LF L V HAG++ L+L+++ AA +L+E
Sbjct: 4 VDFNLPSVIKDFLFDLHDATRRSARIDEVQRLYDAKFKEITDKYFAQSPWPETKVIASEVGNDEGFLVFYREMAMRHVTTKLKPQLADHIASWKNYVQLFDIVLNTKEEDLCLSTQWICDIVLEFVYQFQGFCQFRSQVTSLNAETIKVLEANRDAWNLPEVVSILKKLIRASK-----NSSSAGKNTPFNAGP--FIAQFGYFATIELARLECLTGDFTASLSTISALKLSDRSELFVQLPLCHFNVFYHAGVSNLLLRKFSTAADVLSE 267
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: F0XXG4_AURAN (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXG4_AURAN) HSP 1 Score: 202 bits (515), Expect = 3.600e-58 Identity = 113/269 (42.01%), Postives = 147/269 (54.65%), Query Frame = 1
Query: 37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQC-----SNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEPED-------AWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDA 807
DFL+ + +KDF FDLHD+ RR+ +++ LY EFK+L++ Y WP AE I +QC + D FLC YREL RH+FA ED LA+W NY LFD +L D ++ W FD++HEFVYQFQSFCQ R Q S E W V+GYL L ++ A P+ A APS LH GYFA + SR++CLLGDY + L A+D D+ A FA + V H G + +MLKRY+DA
Sbjct: 8 DFLVNQQIKDFAFDLHDATRRSHLAEDIKRLYTVEFKELSEKYCDKQPWPVAEAIASQCIGNDGAPDAYFLCVYRELMFRHMFAKLKTTLEDRLAAWANYRALFDFVLAGDDAATELSSQWVFDILHEFVYQFQSFCQYRTQNSGRSAEERSLLEASDACWHAPTVLGYLLRLAELGR------AADGPAGRA--RAPSPLHYQMGYFATISRSRVECLLGDYEASVAALGAVDPFDEGAEFAKIFSCRLNVLYHLGYSLMMLKRYRDA 268
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S3ZVD0_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVD0_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.600e-54 Identity = 106/271 (39.11%), Postives = 146/271 (53.87%), Query Frame = 1
Query: 37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSN-----DELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEPE-------DAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAAR 813
D+L+ + +KDFVFDLHD+ RR+ +L+ LYN EFK L+D Y + WP A + +QC D FLC Y+EL RH+FA +D L +W NYC LF+ +L D + +T W FD++HEFVYQFQSFCQ R Q + E DAWA V+ YL ++ P A A S LH FA V +SR +CLLGDY ++ L+ ID+ D+ + + + + H G A +ML+RY+DA R
Sbjct: 7 DYLVNQQIKDFVFDLHDASRRSHIAEDLKRLYNLEFKDLSDKYCDKAPWPSAPAVSSQCIGNDGQPDAYFLCVYKELVYRHMFAKLKTSLDDKLNAWNNYCELFEFVLASEDASLELTAQWVFDVLHEFVYQFQSFCQFRCQNAGRNSEERMKLEAAGDAWAAPTVLRYL---ARLRGCAP------TGGMAAKAQARSPLHFYYATFASVCLSRAECLLGDYEASVQALDGIDVFDEASEVSRIFGCRLNMLYHLGYALMMLRRYRDALR 268
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S0GKJ9_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKJ9_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.220e-53 Identity = 109/298 (36.58%), Postives = 153/298 (51.34%), Query Frame = 1
Query: 34 LDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDT---------NFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEP---------------------------EDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARIL 819
+D LP +KDFVFDLHDS RR+ V E E LY EF++LT YF + WP + + ++C D LFL Y+EL +RHL + + Q D + W Y LFD LL +D I WAFD++HEFVYQFQ FCQ R S++ + DAWAV+ V+ YLH L+ + AP++ H G FA V +SR++CLLGDY C+ + I ++ A+ + A +++ HAG+++LML+RY+DAAR L
Sbjct: 4 IDACLPAPLKDFVFDLHDSARRSFVVTEQEALYTGEFRELTSKYFSNTAWPSTDSVSSECGADPLFLALYKELTHRHLHSISRPQVRDRIDGWRVYRALFDQLLKEADAASEEGAEVQELYILPTWAFDIMHEFVYQFQGFCQFRTTSASNASQAAKKEDDGNNGQNKSHHLNETMDVLTSNRDAWAVETVLFYLHRLVVFAG----------------GNAPTKAHYHLGVFARVALSRMECLLGDYRACLSAVSPI--VEERAVVDTVFSARLSLAYHAGVSYLMLRRYRDAARTL 283
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S1FPR6_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FPR6_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.340e-53 Identity = 116/312 (37.18%), Postives = 165/312 (52.88%), Query Frame = 1
Query: 7 PANREETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEG-------WAFDLVHEFVYQFQSFCQMR----GQRRSDSD---EPEDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAI----------------------DITDKDALFASNMLAFV----TVHQHAGLAFLMLKRYKDAARILN 822
P D +P+TVK+FVFDLHD+ RR++ E LY E++ L + YF WP + I ++C+ D +FL Y EL RH T D + SW Y LFD LL+ ++ T G WAF V+EFVYQFQ+FCQ R G++ + E DAWAV+ V+ YLHGL++++ + DA PAA +Q H++ G +A VG+SRL+CLLGDY C+ L+ + +T K A FA + V TV HAG+++L+L+RY+DAARI++
Sbjct: 6 PPKAASADERDACIPDTVKNFVFDLHDACRRSQSAVEARNLYVVEYRSLCEKYFSNCAWPSSSGISSECNADPIFLALYGELTTRHYHGTCRTTVADRIDSWSTYRHLFDTLLNLANDPGADTMGGLYVPAEWAFAAVNEFVYQFQAFCQFRTNVVGRKEHEMKVLRENRDAWAVETVMFYLHGLVRIAGLDGEEDA---------PAA-TQGHRVFGTYAAVGLSRLECLLGDYTSCLAALKPLRHVMHSIIHPPPLPLENSTGGPPVTPKTA-FADPLHGIVPARATVAYHAGVSYLLLRRYRDAARIMS 306
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: M2Y1Y0_GALSU (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1Y0_GALSU) HSP 1 Score: 183 bits (464), Expect = 1.640e-50 Identity = 89/273 (32.60%), Postives = 152/273 (55.68%), Query Frame = 1
Query: 40 FLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEP-------EDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPA------APSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARIL 819
F++PE+V+ F+ R V E+ LY + F + ++ YFK ++WP E+ NDE+FL FY+EL RH+++ + +W+NYC LF+ +L+ +F + W +D+ EF+YQF+++C R + ++ ++E E W V ++ YLH ++ SNI P+L P + P + +++ GYF+I+G+ R+ CLLGDY + VL+ +D D ALF +++++ + AFLML+RY+DA R+L
Sbjct: 38 FVVPESVQQFLSYFRQKFREGN-VSEVHTLYETSFNRYSERYFKTTSWPNPEIAAKYVDNDEVFLLFYKELYYRHIYSRLQPTLAQRVEAWDNYCDLFNFILNDGIVDFDLPPSWLWDITDEFIYQFETWCHYRNRLKNKTEEELAYLKDNEHIWNVNFLLQYLHAMVNKSNICPWLLNGNEPVGSSDPDDDDFDYSTIPVYRFLGYFSIIGLLRVHCLLGDYKLALMVLQPLDFDDNTALFTRVTACYISLYYYMTFAFLMLRRYEDAVRVL 309 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6688.16189.1 >prot_M-pyrifera_M_contig6688.16189.1 ID=prot_M-pyrifera_M_contig6688.16189.1|Name=mRNA_M-pyrifera_M_contig6688.16189.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp SIPANREETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKback to top mRNA from alignment at M-pyrifera_M_contig6688:9824..13608+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6688.16189.1 ID=mRNA_M-pyrifera_M_contig6688.16189.1|Name=mRNA_M-pyrifera_M_contig6688.16189.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3785bp|location=Sequence derived from alignment at M-pyrifera_M_contig6688:9824..13608+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6688:9824..13608+ >mRNA_M-pyrifera_M_contig6688.16189.1 ID=mRNA_M-pyrifera_M_contig6688.16189.1|Name=mRNA_M-pyrifera_M_contig6688.16189.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig6688:9824..13608+ (Macrocystis pyrifera P11B4 male)back to top |