prot_M-pyrifera_M_contig6670.16160.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig6670.16160.1
Unique Nameprot_M-pyrifera_M_contig6670.16160.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length298
Homology
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI)

HSP 1 Score: 418 bits (1075), Expect = 3.270e-140
Identity = 229/291 (78.69%), Postives = 244/291 (83.85%), Query Frame = 0
Query:    1 MARLPGASNQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPATDRGTPAPAPQHFQQQQKPP-------PGMGQMPMGAAPMGLTAAPTQQEHMQLAQAMGALDSNAAQAALNSMARVAAAGVGVAA 284
            MARLPGASNQQTRHARRLYIGGCPKTTEEEMS FFNE+INRAL  P++GG VASVYVSQEKAFAFLELKTMELAT+VLELDGIV+KETQLKMRRPSD+NP LVPA+ GPIPKLNLS LGI+SSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEY++ GVTAIACEGLHGMTLGDKTLTVRPATDRG+                      PGM QM  G   MGLTA PTQQE MQLAQAM ALD NA+QAA+ S+A+  A  V  AA
Sbjct:  232 MARLPGASNQQTRHARRLYIGGCPKTTEEEMSSFFNEVINRALEYPIDGGAVASVYVSQEKAFAFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPGM-QM-GGGQQMGLTAPPTQQEQMQLAQAMAALDPNASQAAMASLAQGGAGAVPSAA 520          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: A0A7S3Y2H1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2H1_HETAK)

HSP 1 Score: 266 bits (680), Expect = 2.150e-85
Identity = 130/201 (64.68%), Postives = 164/201 (81.59%), Query Frame = 0
Query:    9 NQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPATDR 209
            NQQTRHARRLY+GG    +EE++  FFN+ I+RAL  P  GG V SVY++ E+AFAF+EL T+ELATA + LDG+ F+  QLK+RRPSD+NP+L+P S GP+P+L+LSALG++SS V D  NK+FIGGLPY+L ++QVRELL+AFG LK+FHLVR+PGS TSKGYGFCEY  P VT  AC GL+GM LGDKTLTV+ AT++
Sbjct:   13 NQQTRHARRLYVGGVQGISEEDLKAFFNQTIDRALRAPQPGGAVLSVYINLERAFAFVELPTIELATACMALDGLRFRGLQLKIRRPSDYNPALLPPS-GPLPQLDLSALGVISSQVQDGPNKIFIGGLPYHLADEQVRELLTAFGALKAFHLVREPGSATSKGYGFCEYQEPSVTVKACAGLNGMALGDKTLTVKMATNK 212          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL)

HSP 1 Score: 259 bits (662), Expect = 3.610e-79
Identity = 125/200 (62.50%), Postives = 162/200 (81.00%), Query Frame = 0
Query:    7 ASNQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPA 206
            AS+QQTRHARR+Y+GG  +  E+E++ FFN++I+RAL    EGG V SVY+++E+ FAF+ELKT+EL TA + LDG+ F+   LK+RRP+D+NPS VP  LGPIP+LNL+ALGIVS+TV DS +K+F+GG+PY+L +DQV+ELL AFGPLKSFHLV++  +  SKGYGFCEY+ P VT  AC GL+ M LGDKTLTVR A
Sbjct:  209 ASHQQTRHARRIYVGGIGEVAEQEITEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKTIELTTACMNLDGVSFRGQPLKIRRPNDYNPSNVPKDLGPIPQLNLAALGIVSTTVQDSPHKIFVGGIPYHLNDDQVKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRA 408          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: A0A2D4BU71_PYTIN (Splicing factor U2AF subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU71_PYTIN)

HSP 1 Score: 256 bits (654), Expect = 9.150e-79
Identity = 123/200 (61.50%), Postives = 162/200 (81.00%), Query Frame = 0
Query:    7 ASNQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPA 206
            AS+QQTRHARRLY+GG  + +E E+  FFN++I+RAL    EGG V SVY+++E+ FAF+ELK++EL TA + LDGI F+   +K+RRP+D+NP+ VP  LGPIP+LNL+ALG+VS+TV DS +K+FIGG+PY+LT+DQV+ELL AFGPLKSFHLV+D  +  SKGYGFCE++ P VT  AC GL+ M +GD+TLTVR A
Sbjct:  170 ASHQQTRHARRLYVGGIGEVSEAEIVEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKSIELTTACMNLDGISFRGQPVKVRRPNDYNPATVPKDLGPIPQLNLAALGVVSTTVQDSPSKIFIGGIPYHLTDDQVKELLQAFGPLKSFHLVKDLATNMSKGYGFCEFLDPNVTDAACAGLNDMKIGDRTLTVRRA 369          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: A0A835ZGN1_9STRA (Splicing factor U2AF subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.970e-78
Identity = 123/196 (62.76%), Postives = 156/196 (79.59%), Query Frame = 0
Query:   10 QQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASL-GPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVR 204
            QQTRHARRLY+G  P+  E+E+  FFNE++ RAL    E  PV SVY++Q++ FAF+EL+++ L TA ++LDG+++ +  LK+RRPSD+NPS VP+     +  LNLSALGIVS+TVPDS NKVFIGGLPY+LTE+QV+ELLSAFG LK+ HLV+D G+  SKGY FCEY  P VT+IACEGL+GM LGDKTLTVR
Sbjct:   54 QQTRHARRLYVGNIPRVPEQEVQRFFNEVLTRALGGRQESDPVVSVYLNQDRGFAFVELRSVALTTAAIQLDGLMYGDISLKIRRPSDYNPSAVPSEFTNEVVHLNLSALGIVSNTVPDSPNKVFIGGLPYHLTEEQVKELLSAFGALKALHLVKDAGATNSKGYAFCEYQDPAVTSIACEGLNGMALGDKTLTVR 249          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: A0A7S2V800_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V800_9STRA)

HSP 1 Score: 255 bits (652), Expect = 3.470e-78
Identity = 130/217 (59.91%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    2 ARLPGASN-QQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGP-VASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPATDRGTPAPAP 216
            A +PGA     +RHARRLY+GG    TE E++ FFNE++ +A+    +GG  V SVYV+QE+AFAF+ELK +EL TA + LDGI +++ QL++RRPSD+N +  P   GPIP LNL+ALGIVS+TV D  NKVFIGG+PY+L+E+QVRELL+AFGPLK+FHLVR+ GS TSKGY FCEY+ P +T  ACEGL G+ LG+K+LTVR AT +GT  P P
Sbjct:   25 AMIPGAGQGAMSRHARRLYVGGVQGITEGELTTFFNEILVKAVGPSPDGGQHVLSVYVNQERAFAFVELKGIELTTACMALDGIRYQDHQLRIRRPSDYNAATAPQPTGPIPTLNLAALGIVSTTVSDGPNKVFIGGIPYHLSEEQVRELLTAFGPLKAFHLVREVGSATSKGYAFCEYLDPAITVKACEGLDGLQLGEKSLTVRVATTKGTSEPPP 241          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA)

HSP 1 Score: 253 bits (646), Expect = 3.180e-76
Identity = 121/201 (60.20%), Postives = 160/201 (79.60%), Query Frame = 0
Query:    6 GASNQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPA 206
            G ++QQTRHARRLY+GG  +  E+E++ FFN++I+RAL   +EGG V SVY+++E+ FAF+EL+++EL TA + LDG+ F+   LK+RRP+D+NP+ VP  LGPIP+LNL+ALGIVS+TV D   K+FIGGLPY+L E+Q++ELL AFGPL+SFHLV++  S  SKGYGFCEY+ P  T  AC GL+ M LGDKTLTVR A
Sbjct:  267 GGNSQQTRHARRLYVGGLGEVGEQEITEFFNDVIDRALGERMEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVAFRGQPLKVRRPNDYNPATVPTELGPIPQLNLAALGIVSTTVCDGPGKIFIGGLPYHLNEEQIKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRA 467          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: F0WWX4_9STRA (Splicing factor U2AF subunit n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWX4_9STRA)

HSP 1 Score: 251 bits (641), Expect = 4.140e-76
Identity = 124/197 (62.94%), Postives = 155/197 (78.68%), Query Frame = 0
Query:   10 QQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPA 206
            QQTRHARR+Y+GG  +  E E+S FFN++I+RAL    EGG V SVY+++E+ FAF+ELK++EL TA + LDGI F+   LK+RRP+D+NP LVP  LGPIP LNL+ALGIVS+TV D   KVFIGG+PY+LTE+Q++ELL AFGPLKSFHLV+D  +  SKGY FCEY+  GVT  AC GL+ M LGD+TLTVR A
Sbjct:  209 QQTRHARRIYVGGIGEVNETEISAFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKSIELTTACMNLDGIAFRGQPLKVRRPNDYNPGLVPKDLGPIPALNLAALGIVSTTVQDGPGKVFIGGIPYHLTEEQIKELLQAFGPLKSFHLVKDLTTNLSKGYAFCEYMDSGVTDAACIGLNDMKLGDRTLTVRRA 405          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: K3WB93_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB93_GLOUD)

HSP 1 Score: 251 bits (640), Expect = 1.760e-75
Identity = 124/201 (61.69%), Postives = 156/201 (77.61%), Query Frame = 0
Query:    6 GASNQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPA 206
            G ++QQTRHARR+Y+GG     E E+S FFN++I+RAL    EGG V SVY+++E+ FAF+EL+++EL TA + LDG+ F+   LK+RRP+D+NPS VP  LGPIP LNL+ALGIVS+TV D   KVFIGGLPY+L ++QV+ELL AFGPLKSFHLV++  S  SKGYGFCEY+   VT  AC GL+ M LGDKTLTVR A
Sbjct:  252 GGNSQQTRHARRIYVGGIGDVNEAEISEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVSFRGQPLKIRRPNDYNPSTVPKDLGPIPTLNLAALGIVSTTVSDGPGKVFIGGLPYHLNDEQVKELLQAFGPLKSFHLVKELNSNLSKGYGFCEYVDINVTDSACLGLNDMKLGDKTLTVRRA 452          
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Match: A0A0P1B7G2_PLAHL (Splicing factor U2AF subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G2_PLAHL)

HSP 1 Score: 249 bits (636), Expect = 3.330e-75
Identity = 124/203 (61.08%), Postives = 158/203 (77.83%), Query Frame = 0
Query:    4 LPGASNQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGGPVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNPSLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKTLTVRPA 206
            LPG S QQTRHARRLY+GG  + +E E++ FFN++I+RAL    EGG V SVY+++E+ FAF+EL+T+EL TA + LDG+ +    LK+RRP+D+NP  VP  LGPIP+LNL+ALGIVS+TV D   K+F+GGLPY+L E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY+   VT  AC GL+ M LGDKTLTVR A
Sbjct:  221 LPGMS-QQTRHARRLYVGGIGEISEAEITVFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPTDLGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDVNVTDAACLGLNDMRLGDKTLTVRRA 422          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6670.16160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ9_ECTSI3.270e-14078.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y2H1_HETAK2.150e-8564.68Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8K1C271_PYTOL3.610e-7962.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BU71_PYTIN9.150e-7961.50Splicing factor U2AF subunit n=1 Tax=Pythium insid... [more]
A0A835ZGN1_9STRA1.970e-7862.76Splicing factor U2AF subunit n=1 Tax=Tribonema min... [more]
A0A7S2V800_9STRA3.470e-7859.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A5D6XX73_9STRA3.180e-7660.20Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
F0WWX4_9STRA4.140e-7662.94Splicing factor U2AF subunit n=1 Tax=Albugo laibac... [more]
K3WB93_GLOUD1.760e-7561.69Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1B7G2_PLAHL3.330e-7561.08Splicing factor U2AF subunit n=1 Tax=Plasmopara ha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 131..204
e-value: 4.7E-20
score: 82.6
coord: 17..93
e-value: 0.064
score: 17.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 132..201
e-value: 1.5E-15
score: 56.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 130..208
score: 15.357
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 16..97
score: 11.281
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 101..181
e-value: 1.2E-43
score: 150.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 16..203
e-value: 1.2E-43
score: 150.8
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 8..233
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF 65 KDA SUBUNITcoord: 8..233
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 16..99
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 123..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6670contigM-pyrifera_M_contig6670:177..10194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6670.16160.1mRNA_M-pyrifera_M_contig6670.16160.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig6670 171..13485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig6670.16160.1 ID=prot_M-pyrifera_M_contig6670.16160.1|Name=mRNA_M-pyrifera_M_contig6670.16160.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=298bp
MARLPGASNQQTRHARRLYIGGCPKTTEEEMSHFFNEMINRALLVPVEGG
PVASVYVSQEKAFAFLELKTMELATAVLELDGIVFKETQLKMRRPSDFNP
SLVPASLGPIPKLNLSALGIVSSTVPDSDNKVFIGGLPYNLTEDQVRELL
SAFGPLKSFHLVRDPGSPTSKGYGFCEYISPGVTAIACEGLHGMTLGDKT
LTVRPATDRGTPAPAPQHFQQQQKPPPGMGQMPMGAAPMGLTAAPTQQEH
MQLAQAMGALDSNAAQAALNSMARVAAAGVGVAAYRRRRLSQLSPRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf