mRNA_M-pyrifera_M_contig66162.16060.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66162.16060.1
Unique NamemRNA_M-pyrifera_M_contig66162.16060.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8EP52_CAFRO (Uncharacterized protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8EP52_CAFRO)

HSP 1 Score: 176 bits (446), Expect = 3.210e-46
Identity = 96/261 (36.78%), Postives = 150/261 (57.47%), Query Frame = 1
Query:   19 VLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS----WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQ 786
            ++D  Q+ AF ++ S   PWG  PI  V+  GL+F++   AD+  G   F+VLL +A AW V+F+A+   +G  F+    Q+ ++LR  R ++ LST+ LFLP+S +LFRA AC    S    W GT  +C+   RV + + +   L +F+ L+ +V A F+DR+P S++W+A  HGRV + ++V+KL L+ ++N    +L G   +T  +IVAG  WY  +   L MI    N +    AATF W  + +  AQ   G+ 
Sbjct:   68 LVDTLQLVAFSVNTSPNQPWGAFPIGSVISQGLAFLTPDSADITFGPVAFQVLLALAAAWAVIFVAMAAVIGCAFVQERKQSGLLLRSFRAVAALSTSALFLPISSLLFRAFACDAGSSATGGWLGTSMRCNDPVRVGVLVAIAIVLALFAVLAGFVTATFIDREPASSTWTARLHGRVDLAMLVLKLALTAVYNLSPADLVGDPVVTVALIVAGLAWYATIFRELYMINSAGNVIVGASAATFLWSAMVLGFAQLAPGSD 328          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A813D533_9DINO (TmcB protein n=5 Tax=Sar TaxID=2698737 RepID=A0A813D533_9DINO)

HSP 1 Score: 162 bits (410), Expect = 2.050e-41
Identity = 96/262 (36.64%), Postives = 147/262 (56.11%), Query Frame = 1
Query:   19 VLDFFQMAAFPLSISKGMPW-GGTPIEVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPN--PQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQS-----FTG 780
            V+D  QM AF  S S+  PW      + +   L F++   AD   GL  ++V+  +AT W  +F+AL +++G  F++++ Q+  VLR+ R I+ LS + LFLP++ VL RA AC    P  W+GT   C S  R+V  ++L   L++F  +S++V A FVDR+P S +W+A +HGRV +GL++ K +L+ + N +  +  G   LTG +I AG +W+  V   L    P  N +    A TF W    +A AQ      FTG
Sbjct:  114 VIDTAQMLAFVFSASQLHPWHSAEATDGLSQALVFVTPDSADKTFGLLAYQVMFILATVWATLFVALAVQIGRAFVLDSMQSPTVLRVFRAIASLSVSVLFLPVASVLLRAFACDASAPLGWYGT--SCGSPVRIVATVILAVLLMLFLGVSVFVTATFVDREPGSLTWTAKAHGRVDVGLLLFKFLLTAVVN-IDPSTVGSPLLTGFLIAAGVVWFSAVFRELPHSNPMGNAMAGASAMTFLWATATLAFAQGSPTSDFTG 372          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8CR55_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CR55_CAFRO)

HSP 1 Score: 153 bits (387), Expect = 2.390e-38
Identity = 100/276 (36.23%), Postives = 150/276 (54.35%), Query Frame = 1
Query:   34 QMAAFPLSISKGMPWGGTPIE--VVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS-------WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
            QM AFP S S+ + W GT +   VV   L+ +    AD+  G  V++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+  C    S       W G G  CD+  R+V   V+   L++F  L+ +VAA FVDR P S  W+A SHGRV + L+V K++L+ ++N      +G    T  +IV    W   +   L M+ P  N L+AG AA F W  + + +AQ      + ++ V A P   I G
Sbjct:   62 QMLAFPFSASQHI-WDGTVVRNFVVPM-LTVVMPASADVWFGPMVYRVMFFLGIAWVLIFVSLSVSIAVAFIREQKQSEFALRLFRGVAVLSTTALFLPVSSLLFRSYTCDAGSSVKGSTNDWLGAGIPCDNVWRMVGLGVVAVLLVLFFVLASFVAATFVDRRPGSLRWAAKSHGRVAVALLVAKVVLTAIYNVSPVTARGVG-TTVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWASLSLLVAQLMPENNISIVAVMAVPVAAIAG 334          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8DI18_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DI18_CAFRO)

HSP 1 Score: 146 bits (369), Expect = 6.170e-37
Identity = 95/285 (33.33%), Postives = 150/285 (52.63%), Query Frame = 1
Query:    4 FLFLLVLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
            F+   V++  QM AFP S S+ + W  T I    G  L+ +     D+  G   ++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+ +C        +   W G G  CD+  R++   V+   L++F  L+++VAA FVDR P S  W+A SHGRV I L+V K+IL+ ++N      +       ++I A   W   +   L M+ P  N L+AG A  F W  + + +A    G  V V+ +   P   + G
Sbjct:   52 FILATVIEAGQMLAFPFSASQTV-WRDTVIGNAAGPVLTVVMPASLDVWFGPMAYRVMFFLGIAWVLIFISLSVSIAAAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAAARSLGTCIALIITALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVAMMMPGHDVSVMTLLGIPVAALAG 334          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8EE20_CAFRO (Uncharacterized protein n=8 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE20_CAFRO)

HSP 1 Score: 147 bits (370), Expect = 4.360e-36
Identity = 95/285 (33.33%), Postives = 150/285 (52.63%), Query Frame = 1
Query:    4 FLFLLVLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
            F+   V++  QM AFP S S+ + W  T I    G  L+ +     D+  G   ++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+ +C        +   W G G  CD+  R++   V+   L++F  L+++VAA FVDR P S  W+A SHGRV I L+V K+IL+ ++N      +       ++I A   W   +   L M+ P  N L+AG A  F W  + + +A    G  V V+ +   P   + G
Sbjct:   52 FILATVIEAGQMLAFPFSASQTV-WRDTVIGNAAGPVLTVVMPASLDVWFGPMAYRVMFFLGIAWVLIFISLSVSIAAAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAAARSLGTCIALIITALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVAMMMPGHDVSVMTLVGIPVAALAG 334          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8EE84_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE84_CAFRO)

HSP 1 Score: 145 bits (367), Expect = 9.290e-36
Identity = 92/252 (36.51%), Postives = 139/252 (55.16%), Query Frame = 1
Query:   37 MAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS-------WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQ 768
            M AFP S  + + W GT I  +V   L+ +    AD+  G   ++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+  C    S       W G G  CD+  R+V   V+   L++F  L+ +VAA FVDR P S  W+A SHGRV + L+V K++L+ ++N      +G    T  +IV    W   +   L M+ P  N L+AG AA F W  + + +AQ
Sbjct:    1 MLAFPFSAVQHI-WNGTIIGSIVSPLLTVVMPASADIWFGPVFYQVMFFLGIAWVLIFVSLSVSIAVAFIREQKQSEFALRLFRGVAVLSTTALFLPVSSLLFRSYTCDAGSSVKGSTTDWLGAGIPCDNVWRMVGLGVVAVLLVLFFVLASFVAATFVDRRPGSLRWAAKSHGRVAVALLVAKVVLTAIYNVSPVTARGVG-TTVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWANVMLLVAQ 250          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8D262_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D262_CAFRO)

HSP 1 Score: 145 bits (366), Expect = 1.490e-35
Identity = 93/270 (34.44%), Postives = 146/270 (54.07%), Query Frame = 1
Query:   19 VLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVV 804
            V++  QM AFP S S+ + W  T I    G  L+ +     D+  G   ++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+ +C        +   W G G  CD+  R++   V+   L++F  L+++VAA FVDR P S  W+A SHGRV I L+V K+IL+ ++N      +       ++I A   W   +   L M+ P  N L+AG A  F W  + + +A+   G  V V+ V
Sbjct:   93 VIEAGQMLAFPFSASQTV-WRDTVIGNAAGPVLTVVMPASLDVWFGPMAYRVMFFLGIAWVLIFISLSVSIAVAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAAARSLGTCIALIITALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVAELMPGHDVSVMAV 360          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8ECD4_CAFRO (Uncharacterized protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ECD4_CAFRO)

HSP 1 Score: 145 bits (365), Expect = 2.030e-35
Identity = 94/285 (32.98%), Postives = 151/285 (52.98%), Query Frame = 1
Query:    4 FLFLLVLDFFQMAAFPLSISKGMPWGGTPIEVVGFG-LSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
            F+   V++  QM AFP S  + + W GT I       L+ +     DL  G   ++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+ +C        +   W G G  CD+  R+V+  V+   L++F  L+++VAA FV+R P S  W+A SHGRV I L+V K++L+ +FN      +       +++VA   W   +   L M+ P  N L+AG A  F W  + + ++    G  V V+ +   P   + G
Sbjct:   52 FILATVIEAGQMLAFPFSAVQTV-WQGTIIRSAALPVLTVVMPASLDLWFGPAAYQVMFFLGIAWVLIFISLSVSIAVAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMVVLGVVAVMLLLFFILAMFVAATFVNRHPGSLRWAAKSHGRVAIALLVAKVLLTAIFNVSPAAARSLGTCIALIVVALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVSNLMPGHDVSVMTLLGIPVAALAG 334          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8CQH5_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CQH5_CAFRO)

HSP 1 Score: 143 bits (361), Expect = 6.920e-35
Identity = 89/261 (34.10%), Postives = 144/261 (55.17%), Query Frame = 1
Query:   19 VLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS-------WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFN---TLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQ 768
            V++  QM AFP S ++ + W  T +  +V   L+ +    AD+  G   ++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+ +C    S       W G G  CD+  R+++   +   L +F  L+ +VAA FVDR P S  W+A SHGRV + L++ K++L+ ++N   T   ++      T  +IV    W   +   L M+ P  N L+AG AA F W  + + +AQ
Sbjct:   57 VIEAGQMLAFPFSATQRI-WDNTVVGSIVAPMLTVVMPASADVWFGPMAYQVMFFLGIAWVLIFISLSISIAVAFIREKKQSEFALRLFRGVAVLSTTALFLPVSSLLFRSYSCSAGSSVKGSTNDWLGAGIPCDNEWRLIILGFVAVLLALFFILATFVAATFVDRRPGSLRWAAKSHGRVAVALLMAKVVLTAIYNVSPTAARSIGT----TVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWANVMLLVAQ 312          
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8DZS9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DZS9_CAFRO)

HSP 1 Score: 142 bits (357), Expect = 2.190e-34
Identity = 91/274 (33.21%), Postives = 145/274 (52.92%), Query Frame = 1
Query:   37 MAAFPLSISKGMPWGGTPIEVVGFG-LSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
            M AFP S  + + W GT I       L+ +     DL  G   ++V+  +  AWV++F++L + +   F+    Q+E  LRL RG+++LSTT LFLP+S +LFR+ +C        +   W G G  CD+  R+V+  V+   L++F  L+++VAA FV+R P S  W+A SHGRV I L+V K++L+ +FN      +       +++VA   W   +   L M+ P  N L+AG A  F W  + + ++    G  V V+ +   P   + G
Sbjct:    1 MLAFPFSAVQTV-WQGTIIRSAALPVLTVVMPASLDLWFGPAAYQVMFFLGIAWVLIFISLSVSIAVAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMVVLGVVAVMLLLFFILAMFVAATFVNRHPGSLRWAAKSHGRVAIALLVAKVLLTAIFNVSPAAARSLGTCIALIVVALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVSNLMPGHDVSVMTLLGIPVAALAG 272          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A5A8EP52_CAFRO3.210e-4636.78Uncharacterized protein n=5 Tax=Sar TaxID=2698737 ... [more]
A0A813D533_9DINO2.050e-4136.64TmcB protein n=5 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
A0A5A8CR55_CAFRO2.390e-3836.23Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A5A8DI18_CAFRO6.170e-3733.33Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8EE20_CAFRO4.360e-3633.33Uncharacterized protein n=8 Tax=Cafeteria roenberg... [more]
A0A5A8EE84_CAFRO9.290e-3636.51Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A5A8D262_CAFRO1.490e-3534.44Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A5A8ECD4_CAFRO2.030e-3532.98Uncharacterized protein n=6 Tax=Cafeteria roenberg... [more]
A0A5A8CQH5_CAFRO6.920e-3534.10Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A5A8DZS9_CAFRO2.190e-3433.21Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66162contigM-pyrifera_M_contig66162:445..1284 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size840
Cds size840
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816551.223773-CDS-M-pyrifera_M_contig66162:444..12841622816551.223773-CDS-M-pyrifera_M_contig66162:444..1284Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66162 445..1284 -
1692278041.8181305-CDS-M-pyrifera_M_contig66162:444..12841692278041.8181305-CDS-M-pyrifera_M_contig66162:444..1284Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66162 445..1284 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66162.16060.1prot_M-pyrifera_M_contig66162.16060.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66162 445..1284 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66162.16060.1

>prot_M-pyrifera_M_contig66162.16060.1 ID=prot_M-pyrifera_M_contig66162.16060.1|Name=mRNA_M-pyrifera_M_contig66162.16060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp
MFLFLLVLDFFQMAAFPLSISKGMPWGGTPIEVVGFGLSFISTGVADLVG
GLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLL
STTTLFLPLSGVLFRALACPNPQSWFGTGWQCDSGARVVLAIVLGCTLII
FSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGE
NLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGI
CVALAQSFTGTQVWVLVVGATPFVLIVGYF
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mRNA from alignment at M-pyrifera_M_contig66162:445..1284-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66162.16060.1 ID=mRNA_M-pyrifera_M_contig66162.16060.1|Name=mRNA_M-pyrifera_M_contig66162.16060.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig66162:445..1284- (Macrocystis pyrifera P11B4 male)
ATGTTTTTGTTCCTACTCGTGTTGGACTTCTTCCAAATGGCTGCATTTCC CCTCTCGATTTCGAAAGGGATGCCTTGGGGTGGAACACCAATTGAAGTCG TTGGGTTTGGCTTGTCATTTATTTCAACTGGTGTAGCTGACTTGGTTGGT GGCCTAACTGTGTTCAAAGTCCTTCTTGGGGTTGCCACAGCCTGGGTCGT TGTTTTCTTGGCGCTTGTGCTCCGAGTTGGACACAATTTCTTGGTCAATG CGCCACAAAACGAAGTTGTCTTACGACTGCTACGTGGTATTTCCCTCTTG TCCACTACAACCCTATTTCTTCCTCTCTCCGGGGTTTTGTTTCGTGCCCT AGCGTGTCCAAATCCTCAATCATGGTTTGGAACTGGATGGCAATGTGATT CTGGTGCACGAGTTGTACTCGCAATAGTACTCGGTTGCACCCTAATCATC TTTTCATCCCTAAGCCTCTGGGTTGCAGCCGTGTTCGTGGATCGTGATCC TACTTCCACTTCCTGGTCGGCCATGTCTCATGGCCGTGTTCACATAGGAT TGATTGTGATCAAGCTCATTCTCTCATTCCTCTTCAATACGCTTGGTGAA AACTTGCAAGGTCATTGGTTCCTTACAGGAGTCATGATCGTTGCTGGCGC GATTTGGTACTGGCAAGTTGTGTCTCGTCTAGTAATGATAACTCCTTGGG TGAACCATTTGCAAGCAGGATTTGCTGCTACGTTTACTTGGCTCGGCATT TGTGTAGCACTTGCACAAAGTTTCACTGGTACTCAAGTTTGGGTACTTGT TGTTGGAGCGACACCTTTCGTTCTTATTGTTGGATACTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66162:445..1284-

>mRNA_M-pyrifera_M_contig66162.16060.1 ID=mRNA_M-pyrifera_M_contig66162.16060.1|Name=mRNA_M-pyrifera_M_contig66162.16060.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig66162:445..1284- (Macrocystis pyrifera P11B4 male)
ATGTTTTTGTTCCTACTCGTGTTGGACTTCTTCCAAATGGCTGCATTTCC
CCTCTCGATTTCGAAAGGGATGCCTTGGGGTGGAACACCAATTGAAGTCG
TTGGGTTTGGCTTGTCATTTATTTCAACTGGTGTAGCTGACTTGGTTGGT
GGCCTAACTGTGTTCAAAGTCCTTCTTGGGGTTGCCACAGCCTGGGTCGT
TGTTTTCTTGGCGCTTGTGCTCCGAGTTGGACACAATTTCTTGGTCAATG
CGCCACAAAACGAAGTTGTCTTACGACTGCTACGTGGTATTTCCCTCTTG
TCCACTACAACCCTATTTCTTCCTCTCTCCGGGGTTTTGTTTCGTGCCCT
AGCGTGTCCAAATCCTCAATCATGGTTTGGAACTGGATGGCAATGTGATT
CTGGTGCACGAGTTGTACTCGCAATAGTACTCGGTTGCACCCTAATCATC
TTTTCATCCCTAAGCCTCTGGGTTGCAGCCGTGTTCGTGGATCGTGATCC
TACTTCCACTTCCTGGTCGGCCATGTCTCATGGCCGTGTTCACATAGGAT
TGATTGTGATCAAGCTCATTCTCTCATTCCTCTTCAATACGCTTGGTGAA
AACTTGCAAGGTCATTGGTTCCTTACAGGAGTCATGATCGTTGCTGGCGC
GATTTGGTACTGGCAAGTTGTGTCTCGTCTAGTAATGATAACTCCTTGGG
TGAACCATTTGCAAGCAGGATTTGCTGCTACGTTTACTTGGCTCGGCATT
TGTGTAGCACTTGCACAAAGTTTCACTGGTACTCAAGTTTGGGTACTTGT
TGTTGGAGCGACACCTTTCGTTCTTATTGTTGGATACTTTATGTTTTTGT
TCCTACTCGTGTTGGACTTCTTCCAAATGGCTGCATTTCCCCTCTCGATT
TCGAAAGGGATGCCTTGGGGTGGAACACCAATTGAAGTCGTTGGGTTTGG
CTTGTCATTTATTTCAACTGGTGTAGCTGACTTGGTTGGTGGCCTAACTG
TGTTCAAAGTCCTTCTTGGGGTTGCCACAGCCTGGGTCGTTGTTTTCTTG
GCGCTTGTGCTCCGAGTTGGACACAATTTCTTGGTCAATGCGCCACAAAA
CGAAGTTGTCTTACGACTGCTACGTGGTATTTCCCTCTTGTCCACTACAA
CCCTATTTCTTCCTCTCTCCGGGGTTTTGTTTCGTGCCCTAGCGTGTCCA
AATCCTCAATCATGGTTTGGAACTGGATGGCAATGTGATTCTGGTGCACG
AGTTGTACTCGCAATAGTACTCGGTTGCACCCTAATCATCTTTTCATCCC
TAAGCCTCTGGGTTGCAGCCGTGTTCGTGGATCGTGATCCTACTTCCACT
TCCTGGTCGGCCATGTCTCATGGCCGTGTTCACATAGGATTGATTGTGAT
CAAGCTCATTCTCTCATTCCTCTTCAATACGCTTGGTGAAAACTTGCAAG
GTCATTGGTTCCTTACAGGAGTCATGATCGTTGCTGGCGCGATTTGGTAC
TGGCAAGTTGTGTCTCGTCTAGTAATGATAACTCCTTGGGTGAACCATTT
GCAAGCAGGATTTGCTGCTACGTTTACTTGGCTCGGCATTTGTGTAGCAC
TTGCACAAAGTTTCACTGGTACTCAAGTTTGGGTACTTGTTGTTGGAGCG
ACACCTTTCGTTCTTATTGTTGGATACTTT
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