mRNA_M-pyrifera_M_contig66007.16029.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66007.16029.1
Unique NamemRNA_M-pyrifera_M_contig66007.16029.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A5A8EHQ7_CAFRO (Guanylate cyclase domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EHQ7_CAFRO)

HSP 1 Score: 169 bits (427), Expect = 8.370e-48
Identity = 84/124 (67.74%), Postives = 98/124 (79.03%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFRGLGDRRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            VALLMFDLVGFTKLS AIGPH++V MLD LY  FD +V R GAYKVETIGDAFLVC GAP+PRP  ++A  V KCA +MM+ +  F+  G R +QAR+GIH G VL+G+IG QMPRYQLFGP V
Sbjct:  315 VALLMFDLVGFTKLSQAIGPHKLVMMLDELYDMFDKMVERRGAYKVETIGDAFLVCCGAPDPRPAADAAVRVTKCALDMMQRLRTFKAPGGRALQARVGIHVGPVLSGVIGTQMPRYQLFGPQV 438          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A5A8E558_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E558_CAFRO)

HSP 1 Score: 169 bits (427), Expect = 3.550e-46
Identity = 84/124 (67.74%), Postives = 98/124 (79.03%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFRGLGDRRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            VALLMFDLVGFTKLS AIGPH++V MLD LY  FD +V R GAYKVETIGDAFLVC GAP+PRP  ++A  V KCA +MM+ +  F+  G R +QAR+GIH G VL+G+IG QMPRYQLFGP V
Sbjct:  806 VALLMFDLVGFTKLSQAIGPHKLVMMLDELYDMFDKMVERRGAYKVETIGDAFLVCCGAPDPRPAADAAVRVTKCALDMMQRLRTFKAPGGRALQARVGIHVGPVLSGVIGTQMPRYQLFGPQV 929          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A8IU22_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IU22_CHLRE)

HSP 1 Score: 110 bits (276), Expect = 1.520e-28
Identity = 53/125 (42.40%), Postives = 87/125 (69.60%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFR-GLGDRRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +L  D+VG+T +S+ + P +VV++L+ L+  FD++  ++  YKVETIGDA +  +G P+   P E+AA +A+ A +M+ CV+ F+  +   +++ RIG+HSG V+AG++G +MPRY LFG  V
Sbjct:   19 VTILFSDIVGYTSISSELTPLQVVSLLNDLFSSFDELTQKNNVYKVETIGDALMCVSGCPKEEEPREAAARMARMAQDMIHCVANFKCPIPGVKLKIRIGLHSGPVVAGVVGTRMPRYCLFGDTV 143          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A136PG41_9BACT (Adenylate cyclase n=1 Tax=Chlorobi bacterium OLB7 TaxID=1619898 RepID=A0A136PG41_9BACT)

HSP 1 Score: 112 bits (280), Expect = 2.150e-28
Identity = 61/125 (48.80%), Postives = 86/125 (68.80%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFRGLGDR-RIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +L  D+VGFT LS  I P  +VT LDLL+ +FD++  ++G  K++TIGDA++  +G PE R  H  +A  A+ A E++E V+ F GLGD  ++Q RIG+HSGEV+AGIIG +   Y L+G AV
Sbjct:   45 VTVLFADIVGFTVLSQRITPQELVTGLDLLFSQFDELAEKYGLEKIKTIGDAYMAVSGLPESREDHAESA--ARMAIELVEVVAGFDGLGDGIQLQVRIGLHSGEVVAGIIGKKKFAYDLWGDAV 167          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A8J4EZ81_9CHLO (Guanylate cyclase domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EZ81_9CHLO)

HSP 1 Score: 118 bits (295), Expect = 2.270e-28
Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFRGLGD-RRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +L  D+V +T LS+ + PH VV +L++LY +FD +V RH  YKVETIGDAF+   GAPEP  P ++A  VA+ A +M++CV  F      RRIQ R+G+++G+V+A ++G +MP + L G  V
Sbjct:  525 VTILFSDIVSYTNLSSELSPHEVVDLLNMLYLQFDSLVDRHKLYKVETIGDAFMCVGGAPEPCHPRDAAIRVARMALDMIDCVRVFTASASGRRIQIRVGMYTGDVVAAVMGKKMPHWCLVGDTV 649          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A150GWP1_GONPE (Guanylate cyclase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GWP1_GONPE)

HSP 1 Score: 117 bits (292), Expect = 5.550e-28
Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFR-GLGDRRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +L  D+VG+T +++ + P +VVT+L+ L+  FDD+V R+G YKVETIGDA +  AG P P+ P  +A  +A+ A +M+  V +FR  L   ++Q RIGIHSG V+AG++G +MPRY LFG  V
Sbjct:  352 VTVLFSDIVGYTTVASNLTPFQVVTLLNELFTVFDDLVHRNGVYKVETIGDALMCVAGCPVPQEPAANAERIARMALDMVAAVEQFRPSLDGLKLQIRIGIHSGPVVAGVVGRRMPRYCLFGDTV 476          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A8J4LKU9_9CHLO (Guanylate cyclase domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LKU9_9CHLO)

HSP 1 Score: 114 bits (285), Expect = 5.020e-27
Identity = 56/125 (44.80%), Postives = 84/125 (67.20%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFRG-LGDRRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +L  D+V +T LS+ + P  +V +L++LY +FD +V RH  YKVETIGDAF+   GAPEP  P ++A  VA+ A +M++CV  F      RRIQ R+G+++G+V+A ++G +MP + L G  V
Sbjct:  448 VTILFSDIVSYTNLSSELSPSELVDLLNMLYLQFDSLVDRHQLYKVETIGDAFMCVGGAPEPCHPRDAAIRVARMALDMIDCVRMFTASTSGRRIQIRVGMYTGDVVAAVMGKKMPHWCLVGDTV 572          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A136PCN9_9BACT (Adenylate cyclase (Fragment) n=1 Tax=Chlorobi bacterium OLB7 TaxID=1619898 RepID=A0A136PCN9_9BACT)

HSP 1 Score: 111 bits (278), Expect = 5.770e-27
Identity = 60/125 (48.00%), Postives = 86/125 (68.80%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFRGLGDR-RIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +L  D+VGFT LS  I P  +VT LD+L+ +FD++  ++G  K++TIGDA++  +G PE R  H  +A  A+ A E++E V+ F GLGD  ++Q RIG+HSGEV+AGIIG +   Y L+G AV
Sbjct:  180 VTVLFADIVGFTVLSQGITPRELVTGLDVLFSQFDELAEKYGLEKIKTIGDAYMAVSGLPESREDHAESA--ARMAIELVEVVAGFDGLGDGIQLQVRIGLHSGEVVAGIIGKKKFAYDLWGDAV 302          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: A0A7S2PSW3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PSW3_9STRA)

HSP 1 Score: 114 bits (284), Expect = 6.760e-27
Identity = 59/124 (47.58%), Postives = 80/124 (64.52%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMMECVSRFRGLGDRRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +   D+VGFT ++  + P +V+ ML+ LY EFD +V RH  YKVETIGDA++V  GAP+     E+AA VA+ A E  + V  +R     RI  R+G+HSG V+AG++G  MPRY LFG  V
Sbjct:  521 VTIFFSDIVGFTSMAGEMQPIQVMKMLNDLYVEFDKIVERHNLYKVETIGDAYMVVGGAPDRCTGPEAAAKVAQFALEATKFVQNYRTSTGTRIYIRVGLHSGPVMAGVVGQAMPRYCLFGDTV 644          
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Match: UPI001B888ED3 (guanylate cyclase soluble subunit beta-1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B888ED3)

HSP 1 Score: 111 bits (277), Expect = 1.010e-26
Identity = 64/125 (51.20%), Postives = 79/125 (63.20%), Query Frame = 1
Query:    1 VALLMFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFLVCAGAPEPRPPHESAAIVAKCATEMME-CVSRFRGLGDRRIQARIGIHSGEVLAGIIGDQMPRYQLFGPAV 372
            V +L  D+VGFT +     P ++V+ML+ LY  FD V+  +  YKVETIGDA++V  G PE  P H  A  VA  A +MM  C    R   D  IQ RIGIHSGEV+AGI+G +MPRY LFG AV
Sbjct:  188 VTILFSDIVGFTSICGKCEPIQIVSMLNKLYTMFDQVIGTNRVYKVETIGDAYMVVGGLPEKNPVH--AECVANQALDMMYYCKQVVRPDSDEPIQMRIGIHSGEVVAGIVGRRMPRYCLFGNAV 310          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66007.16029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EHQ7_CAFRO8.370e-4867.74Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A5A8E558_CAFRO3.550e-4667.74Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A8IU22_CHLRE1.520e-2842.40Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A136PG41_9BACT2.150e-2848.80Adenylate cyclase n=1 Tax=Chlorobi bacterium OLB7 ... [more]
A0A8J4EZ81_9CHLO2.270e-2846.40Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A150GWP1_GONPE5.550e-2848.00Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A8J4LKU9_9CHLO5.020e-2744.80Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A136PCN9_9BACT5.770e-2748.00Adenylate cyclase (Fragment) n=1 Tax=Chlorobi bact... [more]
A0A7S2PSW3_9STRA6.760e-2747.58Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
UPI001B888ED31.010e-2651.20guanylate cyclase soluble subunit beta-1-like n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66007contigM-pyrifera_M_contig66007:3..374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score113.6
Seed ortholog evalue6.3e-23
Seed eggNOG ortholog10224.XP_006814368.1
KEGG rclassRC00295
KEGG koko:K12323,ko:K12324
KEGG ReactionR00434
KEGG Pathwayko00230,ko04022,ko04024,ko04270,ko04714,ko04921,ko04923,ko04924,ko04925,map00230,map04022,map04024,map04270,map04714,map04921,map04923,map04924,map04925
KEGG ModuleM00694
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Adenylyl- / guanylyl cyclase, catalytic domain
EggNOG OGs38E22@33154,3B9DY@33208,3DDWB@33213,COG2114@1,KOG1023@2759
EC4.6.1.2
COG Functional cat.T
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Exons1
Model size372
Cds size360
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816549.230727-CDS-M-pyrifera_M_contig66007:2..3621622816549.230727-CDS-M-pyrifera_M_contig66007:2..362Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66007 3..362 -
1692278040.727343-CDS-M-pyrifera_M_contig66007:2..3621692278040.727343-CDS-M-pyrifera_M_contig66007:2..362Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66007 3..362 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816549.2433403-UTR-M-pyrifera_M_contig66007:362..3741622816549.2433403-UTR-M-pyrifera_M_contig66007:362..374Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig66007 363..374 -
1692278040.7390773-UTR-M-pyrifera_M_contig66007:362..3741692278040.7390773-UTR-M-pyrifera_M_contig66007:362..374Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig66007 363..374 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66007.16029.1prot_M-pyrifera_M_contig66007.16029.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66007 3..362 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66007.16029.1

>prot_M-pyrifera_M_contig66007.16029.1 ID=prot_M-pyrifera_M_contig66007.16029.1|Name=mRNA_M-pyrifera_M_contig66007.16029.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MFDLVGFTKLSAAIGPHRVVTMLDLLYFEFDDVVARHGAYKVETIGDAFL
VCAGAPEPRPPHESAAIVAKCATEMMECVSRFRGLGDRRIQARIGIHSGE
VLAGIIGDQMPRYQLFGPAV
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mRNA from alignment at M-pyrifera_M_contig66007:3..374-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66007.16029.1 ID=mRNA_M-pyrifera_M_contig66007.16029.1|Name=mRNA_M-pyrifera_M_contig66007.16029.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig66007:3..374- (Macrocystis pyrifera P11B4 male)
GTTGCTTTGTTGATGTTTGACCTTGTTGGATTCACAAAACTCTCTGCTGC CATTGGTCCGCATCGTGTCGTTACGATGCTTGATCTTCTCTACTTTGAGT TTGACGATGTAGTAGCACGGCATGGAGCGTACAAAGTCGAAACAATTGGA GATGCATTTCTGGTCTGTGCAGGAGCTCCAGAGCCACGTCCACCCCATGA ATCTGCTGCCATTGTTGCAAAGTGTGCGACTGAAATGATGGAATGTGTGT CACGATTTCGTGGTCTTGGTGATCGTCGCATTCAAGCAAGAATTGGAATT CACTCAGGTGAAGTCCTCGCGGGGATTATCGGAGATCAAATGCCTCGCTA CCAATTGTTTGGCCCAGCAGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66007:3..374-

>mRNA_M-pyrifera_M_contig66007.16029.1 ID=mRNA_M-pyrifera_M_contig66007.16029.1|Name=mRNA_M-pyrifera_M_contig66007.16029.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig66007:3..374- (Macrocystis pyrifera P11B4 male)
ATGTTTGACCTTGTTGGATTCACAAAACTCTCTGCTGCCATTGGTCCGCA
TCGTGTCGTTACGATGCTTGATCTTCTCTACTTTGAGTTTGACGATGTAG
TAGCACGGCATGGAGCGTACAAAGTCGAAACAATTGGAGATGCATTTCTG
GTCTGTGCAGGAGCTCCAGAGCCACGTCCACCCCATGAATCTGCTGCCAT
TGTTGCAAAGTGTGCGACTGAAATGATGGAATGTGTGTCACGATTTCGTG
GTCTTGGTGATCGTCGCATTCAAGCAAGAATTGGAATTCACTCAGGTGAA
GTCCTCGCGGGGATTATCGGAGATCAAATGCCTCGCTACCAATTGTTTGG
CCCAGCAGTGATGTTTGACCTTGTTGGATTCACAAAACTCTCTGCTGCCA
TTGGTCCGCATCGTGTCGTTACGATGCTTGATCTTCTCTACTTTGAGTTT
GACGATGTAGTAGCACGGCATGGAGCGTACAAAGTCGAAACAATTGGAGA
TGCATTTCTGGTCTGTGCAGGAGCTCCAGAGCCACGTCCACCCCATGAAT
CTGCTGCCATTGTTGCAAAGTGTGCGACTGAAATGATGGAATGTGTGTCA
CGATTTCGTGGTCTTGGTGATCGTCGCATTCAAGCAAGAATTGGAATTCA
CTCAGGTGAAGTCCTCGCGGGGATTATCGGAGATCAAATGCCTCGCTACC
AATTGTTTGGCCCAGCAGTG
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