prot_M-pyrifera_M_contig65577.15937.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig65577.15937.1
Unique Nameprot_M-pyrifera_M_contig65577.15937.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
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BLAST of mRNA_M-pyrifera_M_contig65577.15937.1 vs. uniprot
Match: D7FNJ2_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNJ2_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 6.550e-22
Identity = 69/112 (61.61%), Postives = 79/112 (70.54%), Query Frame = 0 
Query:    2 VARRQARSREQEEAFLKGVTASVEESASNPWARVCDLVDLKAPILSV-STASARSGXXXXXXXXRSGXXXRKGSXXXXXXXXXXXXXXXXXGMAEEDAFQATAKMRSLIIQV 112
            VARRQARSREQEE FLKGV+AS+EES SNPWAR+CDLVDLK P++S  S+ SA +GXXXXXXXX      RKGS                 GM EE+ F+AT KMRSLIIQ+
Sbjct:  166 VARRQARSREQEETFLKGVSASIEESTSNPWARICDLVDLKKPVISAKSSFSAGAGXXXXXXXXXX----RKGSATAQS------------GMEEEEVFRATEKMRSLIIQM 261
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65577.15937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNJ2_ECTSI6.550e-2261.61Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65577contigM-pyrifera_M_contig65577:726..1061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65577.15937.1mRNA_M-pyrifera_M_contig65577.15937.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig65577 726..1061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig65577.15937.1 ID=prot_M-pyrifera_M_contig65577.15937.1|Name=mRNA_M-pyrifera_M_contig65577.15937.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
KVARRQARSREQEEAFLKGVTASVEESASNPWARVCDLVDLKAPILSVST
ASARSGGGGGGGGSRSGGGGRKGSGSSGSRSGSRRGSGAGGGMAEEDAFQ
ATAKMRSLIIQV
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