mRNA_M-pyrifera_M_contig106903.1476.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: A0A7S4HM80_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HM80_9EUKA) HSP 1 Score: 192 bits (489), Expect = 4.690e-55 Identity = 93/181 (51.38%), Postives = 134/181 (74.03%), Query Frame = 1 Query: 7 SRSAADEQLVEQIRLASGTEKRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSRPSSSHWLSWLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 SRS DE+++ +R + + + L IVDCRSR++AYANK G GTES+ +Y CT++F+G+ENIH MR+++H + S S ++W H +L SA V+K + + G+SVL+HCSDGWDRTAQ+S+L+Q+LLDP++RT+ GF L+EKEW++FGHKF DR GHG++SFW++ E SPI Sbjct: 179 SRSEPDEKMLRIVRELNPSGEALRIVDCRSRISAYANKAKMG-GTESLTYYEKCTIEFLGIENIHVMRDSMHGVASLVSSSSGGD-ITWNQHTSRVLKSAIKVSKHLLS-GISVLIHCSDGWDRTAQISSLSQILLDPYFRTMVGFEKLIEKEWISFGHKFGDRVGHGKASFWNDHECSPI 356
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: A0A7S4KBE0_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KBE0_9EUKA) HSP 1 Score: 181 bits (458), Expect = 4.000e-50 Identity = 90/170 (52.94%), Postives = 120/170 (70.59%), Query Frame = 1 Query: 73 LNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREAL---HELYLACSRPSSSHWLS------WLSHLELLLSSAFAVAKLVANDG--LSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 + I DCR RL A AN+ GAG E++++Y C L+++G+ NIH MR++L H+L + ++ SS WLS W H+ L+L A ++ K VA+ S LVHCSDGWDRT+QL +LA+LLLDP+YRTLEGF VL+EKEWL+FGHKF+DR G GR +WDE+E SPI Sbjct: 334 VTIFDCRPRLNAIANQTL-GAGAEALENYPGCRLEYLGIHNIHTMRDSLKRVHDLCRSLTKSGSSKWLSSLEYTGWFQHILLVLGGAASIVKCVASKDSPTSALVHCSDGWDRTSQLVSLAELLLDPYYRTLEGFEVLIEKEWLSFGHKFHDRLGVGRGGYWDENETSPI 502
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: A0A7J7TEG6_RHIFE (Myotubularin related protein 4 n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J7TEG6_RHIFE) HSP 1 Score: 172 bits (435), Expect = 1.230e-48 Identity = 93/194 (47.94%), Postives = 125/194 (64.43%), Query Frame = 1 Query: 4 DSRSAADEQLVEQIRLASGTE-----KRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSR-PSSSHWLS------WLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 D+ A D + SG E ++L I+D RS AA AN+ A+G G E ++Y +C + F+G+ NIHA+R + H L CS+ P S+WLS WL HL ++L +A VA V +G VLVHCSDGWDRT Q+ ALA++LLDP+YRTLEGF VLVE +WL FGHKF DRCGH ++ D++E+ P+ Sbjct: 113 DASEACDTDFDSSLTACSGVESTAAPQKLLILDARSYTAAVANR-AKGGGCECEEYYPNCEVVFMGMANIHAIRNSFHYLRAVCSQMPDPSNWLSALESTKWLQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTLEGFQVLVESDWLDFGHKFGDRCGHQENAE-DQNEQCPV 304
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: UPI00071CECCE (myotubularin-related protein 4-like n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071CECCE) HSP 1 Score: 168 bits (426), Expect = 2.830e-48 Identity = 85/172 (49.42%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 55 SGTEKRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSR-PSSSHWLS------WLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 +GT ++L I+D RS AA AN+ A+G G E ++Y +C + F+G+ NIH++R + L CS+ P S+WLS WL HL ++L +A V+ V +G VLVHCSDGWDRT Q+ ALA++LLDP+YRT+EGF VLVE +WL FGHKF DRCGH + D++E+ P+ Sbjct: 106 AGTPQKLLILDARSYTAAVANR-AKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGH-QEKVEDQNEQCPV 275
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: A0A7S4UDS2_9EUKA (Hypothetical protein n=2 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UDS2_9EUKA) HSP 1 Score: 173 bits (439), Expect = 7.280e-48 Identity = 86/167 (51.50%), Postives = 116/167 (69.46%), Query Frame = 1 Query: 73 LNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSRPSSSHW--------LSWLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 L I DCRS++AA AN A+GAGTE+ +Y C+L F+ ++NIHA+R +L L CS + S W WL H++ +LS + +VAK + + G SVL+HCSDGWDRTAQ+SALAQL LDP +RT+EGF VLVEKEW++FGHKF+DR GR ++ +E P+ Sbjct: 321 LEIYDCRSQIAAVAN-FAQGAGTENPGNYEGCSLSFLAIQNIHAVRSSLEMLRTLCSEQNVSEWKWYSSLEGTQWLCHIQTILSGSLSVAKTL-HFGRSVLIHCSDGWDRTAQVSALAQLFLDPFFRTMEGFEVLVEKEWISFGHKFHDRLAPGREKYFAHNEACPV 485
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: A0A8C9VGA1_SCLFO (Phosphatidylinositol-3-phosphatase n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VGA1_SCLFO) HSP 1 Score: 171 bits (433), Expect = 3.040e-47 Identity = 87/169 (51.48%), Postives = 118/169 (69.82%), Query Frame = 1 Query: 67 KRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSR-PSSSHWLS------WLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDE-SERSPI 549 ++L I+D RS AA AN+ A+G G E ++Y +C + F+G+ NIH++R + H L L C++ P ++WLS WL HL LL+ +A VA V D VLVHCSDGWDRT Q+ AL+++LLDP+YRT+EGF VLVE EWL FGHKF DRCGHG + W++ +ER P+ Sbjct: 299 QKLLILDARSYAAAVANR-AKGGGCEYPEYYPNCEVVFMGMANIHSIRRSFHSLRLLCTQMPDPTNWLSALEGTKWLQHLSLLIKAALLVANAVDRDHRPVLVHCSDGWDRTPQIVALSKILLDPYYRTIEGFQVLVEMEWLDFGHKFADRCGHGEN--WEDINERCPV 464
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: A0A2F0BGR6_ESCRO (Myotubularin-related protein 4 (Fragment) n=1 Tax=Eschrichtius robustus TaxID=9764 RepID=A0A2F0BGR6_ESCRO) HSP 1 Score: 169 bits (427), Expect = 3.620e-47 Identity = 92/194 (47.42%), Postives = 124/194 (63.92%), Query Frame = 1 Query: 4 DSRSAADEQLVEQIRLASGTE-----KRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSR-PSSSHWLS------WLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 D+ A D + SG E ++L I+D RS AA AN+ A+G G E ++Y +C + F+G+ NIHA+R + L CS+ P S+WLS WL HL ++L +A VA V +G VLVHCSDGWDRT Q+ ALA++LLDP+YRTLEGF VLVE +WL FGHKF DRCGH ++ D++E+ P+ Sbjct: 56 DATEACDTDFDSSLTACSGVESTAAPQKLLILDARSYTAAVANR-AKGGGCECEEYYPNCEVVFMGMANIHAIRNSFQYLRAVCSQMPDPSNWLSALESTRWLQHLSVMLKAAVLVANTVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTLEGFQVLVESDWLDFGHKFGDRCGHQENAE-DQNEQCPV 247
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: A0A091TK37_PELCR (Myotubularin-related protein 4 (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A091TK37_PELCR) HSP 1 Score: 168 bits (426), Expect = 4.790e-47 Identity = 85/172 (49.42%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 55 SGTEKRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSR-PSSSHWLS------WLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 +GT ++L I+D RS AA AN+ A+G G E ++Y +C + F+G+ NIH++R + L CS+ P S+WLS WL HL ++L +A V+ V +G VLVHCSDGWDRT Q+ ALA++LLDP+YRT+EGF VLVE +WL FGHKF DRCGH + D++E+ P+ Sbjct: 88 TGTPQKLLILDARSYTAAVANR-AKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGH-QEKVEDQNEQCPV 257
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: UPI001402C53D (myotubularin-related protein 4 isoform X8 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001402C53D) HSP 1 Score: 174 bits (440), Expect = 5.320e-47 Identity = 89/183 (48.63%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 22 DEQLVEQIRLASGTEKRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSR-PSSSHWLS------WLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 D + + + GT ++L I+D RS AA AN+ A+G G E ++Y +C + F+G+ NIH++R + H L CS+ P +WLS WL HL ++L +A VA +V +G VLVHCSDGWDRT Q+ ALA++LLDP+YRT+EGF VLVE EWL FGHKF DRCGH + D SE+ P+ Sbjct: 331 DSSITGSVAESGGTPQKLLILDARSYTAAVANR-AKGGGCECEEYYPNCEVMFMGMANIHSIRNSFHSLRAVCSQMPDPGNWLSAMENTKWLQHLSVMLKAAVLVANMVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTIEGFQVLVETEWLDFGHKFGDRCGHSENQD-DLSEQCPV 511
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Match: UPI0014041B60 (myotubularin-related protein 4 isoform X1 n=7 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014041B60) HSP 1 Score: 174 bits (440), Expect = 6.550e-47 Identity = 89/183 (48.63%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 22 DEQLVEQIRLASGTEKRLNIVDCRSRLAAYANKVARGAGTESVQHYAHCTLDFVGVENIHAMREALHELYLACSR-PSSSHWLS------WLSHLELLLSSAFAVAKLVANDGLSVLVHCSDGWDRTAQLSALAQLLLDPHYRTLEGFPVLVEKEWLAFGHKFYDRCGHGRSSFWDESERSPI 549 D + + + GT ++L I+D RS AA AN+ A+G G E ++Y +C + F+G+ NIH++R + H L CS+ P +WLS WL HL ++L +A VA +V +G VLVHCSDGWDRT Q+ ALA++LLDP+YRT+EGF VLVE EWL FGHKF DRCGH + D SE+ P+ Sbjct: 331 DSSITGSVAESGGTPQKLLILDARSYTAAVANR-AKGGGCECEEYYPNCEVMFMGMANIHSIRNSFHSLRAVCSQMPDPGNWLSAMENTKWLQHLSVMLKAAVLVANMVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTIEGFQVLVETEWLDFGHKFGDRCGHSENQD-DLSEQCPV 511 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106903.1476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106903.1476.1 >prot_M-pyrifera_M_contig106903.1476.1 ID=prot_M-pyrifera_M_contig106903.1476.1|Name=mRNA_M-pyrifera_M_contig106903.1476.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp ADSRSAADEQLVEQIRLASGTEKRLNIVDCRSRLAAYANKVARGAGTESVback to top mRNA from alignment at M-pyrifera_M_contig106903:76..624+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106903.1476.1 ID=mRNA_M-pyrifera_M_contig106903.1476.1|Name=mRNA_M-pyrifera_M_contig106903.1476.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig106903:76..624+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106903:76..624+ >mRNA_M-pyrifera_M_contig106903.1476.1 ID=mRNA_M-pyrifera_M_contig106903.1476.1|Name=mRNA_M-pyrifera_M_contig106903.1476.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig106903:76..624+ (Macrocystis pyrifera P11B4 male)back to top |