mRNA_M-pyrifera_M_contig106819.1464.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig106819.1464.1
Unique NamemRNA_M-pyrifera_M_contig106819.1464.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A518A3A7_9PLAN (Lactonase, 7-bladed beta-propeller n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518A3A7_9PLAN)

HSP 1 Score: 370 bits (950), Expect = 2.320e-123
Identity = 177/192 (92.19%), Postives = 188/192 (97.92%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVN 576
            EVQDFEHTIRGPLMQGRGLVTGRIN SLKAPNKGLS+ALDAMAAYSNTH+FTLSP+AK+GL+PAA+RGRE+FFS+QTKCATCHSGPFYSDSNPT KIIRHNVGTAVDNPGE MGPEYDTPTLLG+YRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADL+EFLKALPYEDPVPQA+AAGLVKV 
Sbjct:  429 EVQDFEHTIRGPLMQGRGLVTGRINASLKAPNKGLSRALDAMAAYSNTHKFTLSPYAKKGLNPAAKRGREIFFSQQTKCATCHSGPFYSDSNPTAKIIRHNVGTAVDNPGEKMGPEYDTPTLLGVYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLVEFLKALPYEDPVPQAQAAGLVKVK 620          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A3C0AEJ3_9PLAN (Cytochrome c domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AEJ3_9PLAN)

HSP 1 Score: 335 bits (859), Expect = 2.080e-115
Identity = 158/192 (82.29%), Postives = 177/192 (92.19%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVN 576
            EVQDFEHTIRGPLM+G+GLV G++++SL  PNKGLS+ALDAMAAYSNTH+FTLSP++K GLS AAQRGR+LFFSKQT+CATCHSGPF +DS P++ I RHNVGTAVDNPGE MGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLT YNHDDQHG TSQLS+Q+ ADL+EFLKALPYEDPVPQA AAGL+KV 
Sbjct:   10 EVQDFEHTIRGPLMKGKGLVRGKLHESLDKPNKGLSEALDAMAAYSNTHDFTLSPYSKNGLSSAAQRGRQLFFSKQTQCATCHSGPFLTDSVPSETITRHNVGTAVDNPGEKMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTTYNHDDQHGKTSQLSRQDIADLVEFLKALPYEDPVPQANAAGLIKVT 201          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A3D3RBC4_9PLAN (Uncharacterized protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A3D3RBC4_9PLAN)

HSP 1 Score: 342 bits (877), Expect = 2.310e-112
Identity = 163/193 (84.46%), Postives = 178/193 (92.23%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVNK 579
            EVQDFEHTIRGPLMQG+GL  GRI +SL  PNKGLS+ALDAMAAYSNTH+FTLSP+AK GLSPAAQRGR+LFFSKQT+CATCHSGPF +DS P+  I RHNVGTAVDNPGE MGPEYDTPTLLGIYRTAPYLSHGKA+TLEEVLT +NH+DQHG TSQLSKQERADL+EFLKALPYEDPVPQA+AAGLVK+ K
Sbjct:  429 EVQDFEHTIRGPLMQGKGLARGRIYESLDKPNKGLSEALDAMAAYSNTHDFTLSPYAKNGLSPAAQRGRQLFFSKQTQCATCHSGPFLTDSVPSKSITRHNVGTAVDNPGEKMGPEYDTPTLLGIYRTAPYLSHGKAKTLEEVLTTFNHNDQHGKTSQLSKQERADLVEFLKALPYEDPVPQAKAAGLVKITK 621          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A517RCM5_9PLAN (Lactonase, 7-bladed beta-propeller n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RCM5_9PLAN)

HSP 1 Score: 342 bits (876), Expect = 3.260e-112
Identity = 163/193 (84.46%), Postives = 180/193 (93.26%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVNK 579
            EVQDFEHTIRGPLMQG GLV G+IN SL APNKGLS+ALDAMAAYSNTHEFTLSP+AK+GLSPAA+RGRELFFSKQTKCA+CHSGPF +DS P+ KI+RH+VGT+VDNPGE MGP YDTPTLLGIYRTAPYL HGKA+TLEEV T+YNHDDQHG TSQLSKQE ADL+EFLKALPYEDPVPQA+AAG+VKV+K
Sbjct:  429 EVQDFEHTIRGPLMQGSGLVRGKINPSLDAPNKGLSRALDAMAAYSNTHEFTLSPYAKKGLSPAAKRGRELFFSKQTKCASCHSGPFLTDSVPSAKIVRHDVGTSVDNPGEKMGPAYDTPTLLGIYRTAPYLHHGKAKTLEEVFTIYNHDDQHGNTSQLSKQELADLVEFLKALPYEDPVPQAKAAGMVKVSK 621          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A517WXD6_9PLAN (Di-heme cytochrome c peroxidase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WXD6_9PLAN)

HSP 1 Score: 337 bits (863), Expect = 2.930e-110
Identity = 157/193 (81.35%), Postives = 181/193 (93.78%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVNK 579
            EVQDFEHTIRGPLMQG+GL  G+IN SL+APNKGLS+ALDAMAAYSNTHEFTLSP+AK+GL+PAA+RGR LFFSKQT+CATCHSGPF +DS PT +I+RH+VGT+VDNPGE MGP YDTPTLLG+YRTAPYL HGKAQ+LEEVLT+YNHDD+HG TSQLSKQ+ ADL+EFLKALPYEDPVP+A+AAGLVK++K
Sbjct:  429 EVQDFEHTIRGPLMQGKGLAQGKINPSLEAPNKGLSRALDAMAAYSNTHEFTLSPYAKKGLTPAAKRGRRLFFSKQTQCATCHSGPFLTDSVPTGRIVRHDVGTSVDNPGEKMGPAYDTPTLLGLYRTAPYLHHGKAQSLEEVLTIYNHDDKHGKTSQLSKQQIADLVEFLKALPYEDPVPKAKAAGLVKISK 621          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A059X405_9BACT (Cytochrome c (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A059X405_9BACT)

HSP 1 Score: 266 bits (681), Expect = 5.600e-88
Identity = 129/193 (66.84%), Postives = 150/193 (77.72%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVNK 579
            EVQDFEHTIRGPLMQG GL+ G++N  L   NKG S ALDA++AYSN+HE+ LSPHAK GLS AAQRG++LFFS + KCATCHSG FY+DS        H+VGT  D+P E MGP++DTPTL GIYRTAPYL HG+A TL +VLT  N  D+HG TS L   E ADL+EFLKALPYEDPVPQA AAGL KV++
Sbjct:   32 EVQDFEHTIRGPLMQGSGLIQGKLNAGLADANKGKSAALDALSAYSNSHEYALSPHAKGGLSEAAQRGKKLFFSSEAKCATCHSGIFYTDSTTERPFRMHDVGTGGDDPSEKMGPKFDTPTLHGIYRTAPYLHHGRAATLTDVLTTCNAGDKHGQTSHLKTGEIADLVEFLKALPYEDPVPQARAAGLTKVDR 224          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: UPI001421ED35 (hypothetical protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001421ED35)

HSP 1 Score: 271 bits (694), Expect = 5.510e-85
Identity = 129/197 (65.48%), Postives = 157/197 (79.70%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDS----NPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVNK 579
            EVQDFEHTIRG LMQGRGL  GR+NDSL A N+GLS+ LDA++AY+NTH+F +SPHAK GLS AA+RGR+LF+SK+T+CA CHSGPF +DS    N     +RH+VGT +D+P E MGP+YDTPTLLG+YRTAPYL HG A+TL +VLT  N  DQHG TSQL+  E  DL+EFLK+LPYEDP P A+AAGL +  +
Sbjct:  424 EVQDFEHTIRGQLMQGRGLFRGRLNDSLGATNRGLSKDLDALSAYANTHKFAISPHAKNGLSEAAKRGRDLFYSKETQCANCHSGPFLTDSLSNPNSDGNFVRHDVGTGLDDPTEAMGPKYDTPTLLGVYRTAPYLHHGTAKTLRDVLTTANPKDQHGRTSQLTSAEITDLVEFLKSLPYEDPEPAAQAAGLHRFER 620          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A3L7PE27_9BACT (Cytochrome c domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PE27_9BACT)

HSP 1 Score: 271 bits (694), Expect = 6.480e-85
Identity = 127/192 (66.15%), Postives = 157/192 (81.77%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVN 576
            EVQDFEHTIRGPLMQGRGL  G I++SL+ PN+GLS+ LDA+A Y+N+H F +SPHAK GLS AAQRG++ FFSK+T CA CHSGPFY+DS P  +   H+VGT   +  E MGP+YDTPTL+G+YRTAPYL HGKA+TLEEVLT +N ++QHG T+QL+  + ADL+EFLKALPYEDPV QA+ AGL++V 
Sbjct:  425 EVQDFEHTIRGPLMQGRGLARGSIHESLEKPNQGLSRDLDALAVYTNSHTFAMSPHAKSGLSEAAQRGKQHFFSKETGCAKCHSGPFYTDSQPGAERKLHDVGTGNADSSEKMGPKYDTPTLIGVYRTAPYLHHGKAKTLEEVLTTFNPENQHGTTTQLTPAQIADLVEFLKALPYEDPVEQAKKAGLIQVR 616          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A517ZSC0_9PLAN (Lactonase, 7-bladed beta-propeller n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZSC0_9PLAN)

HSP 1 Score: 265 bits (676), Expect = 2.090e-82
Identity = 124/192 (64.58%), Postives = 153/192 (79.69%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVN 576
            EVQDFEHTIR  LMQGRGL+ G +N +L+ PN+GLS  LDA+AAYSN+H+FTLSPHAK GL+ AA+RG++LFF ++T+CATCH GPF++DS        H+VGT  D+P E+MGP+YDTPTLLGIYRTAPYL HGKA+TL +VLT  N +DQHG TS LS ++  DL+EFLK LPYEDP P A  AGL +V+
Sbjct:  419 EVQDFEHTIRSQLMQGRGLIRGDVNPALETPNRGLSAELDAIAAYSNSHKFTLSPHAKTGLNAAAKRGQKLFFDEETQCATCHGGPFFTDSRMEKPFRLHDVGTGNDDPSEIMGPKYDTPTLLGIYRTAPYLHHGKAKTLRDVLTTQNKNDQHGQTSHLSAEQIDDLVEFLKCLPYEDPEPAAIKAGLRRVD 610          
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Match: A0A353Z5R2_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353Z5R2_9PLAN)

HSP 1 Score: 264 bits (675), Expect = 3.220e-82
Identity = 120/193 (62.18%), Postives = 155/193 (80.31%), Query Frame = 1
Query:    1 EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHEFTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRHNVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHDDQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVNK 579
            EVQDFEHTIRGPLMQG+GL+ G ++DSL  PN GLS  LDA+A+YSN+H+F+LSPH++QGLS AA RG++LF + +T+C  CH+GPFY+DS P      H+VGT VD+P E +GP YDTP+LLGIYR+APYL HGKA TLEEVLT YN +D+HG TS L+ ++ +DL+EFLKALP+E+P   A  AGL+++ K
Sbjct:  422 EVQDFEHTIRGPLMQGQGLIRGSVHDSLGTPNSGLSADLDALASYSNSHKFSLSPHSRQGLSEAASRGQQLFQAAETRCVECHNGPFYTDSRPERPFRSHDVGTGVDDPTEKLGPTYDTPSLLGIYRSAPYLHHGKATTLEEVLTKYNPEDRHGKTSHLNSKQISDLVEFLKALPFEEPEADANRAGLIRIEK 614          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106819.1464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A3A7_9PLAN2.320e-12392.19Lactonase, 7-bladed beta-propeller n=9 Tax=Gimesia... [more]
A0A3C0AEJ3_9PLAN2.080e-11582.29Cytochrome c domain-containing protein (Fragment) ... [more]
A0A3D3RBC4_9PLAN2.310e-11284.46Uncharacterized protein n=9 Tax=Planctomycetaceae ... [more]
A0A517RCM5_9PLAN3.260e-11284.46Lactonase, 7-bladed beta-propeller n=2 Tax=Gimesia... [more]
A0A517WXD6_9PLAN2.930e-11081.35Di-heme cytochrome c peroxidase n=2 Tax=Gimesia aq... [more]
A0A059X405_9BACT5.600e-8866.84Cytochrome c (Fragment) n=1 Tax=uncultured bacteri... [more]
UPI001421ED355.510e-8565.48hypothetical protein n=1 Tax=Rubinisphaera sp. JC6... [more]
A0A3L7PE27_9BACT6.480e-8566.15Cytochrome c domain-containing protein n=1 Tax=Pla... [more]
A0A517ZSC0_9PLAN2.090e-8264.58Lactonase, 7-bladed beta-propeller n=3 Tax=Symmach... [more]
A0A353Z5R2_9PLAN3.220e-8262.18Cytochrome c domain-containing protein n=1 Tax=Pla... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106819contigM-pyrifera_M_contig106819:43..624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score345.9
Seed ortholog evalue1.2e-92
Seed eggNOG ortholog344747.PM8797T_15883
Hectar predicted targeting categoryother localisation
EggNOG free text desc.amine dehydrogenase activity
EggNOG OGs2IXUA@203682,COG1858@1,COG1858@2,COG3391@1,COG3391@2
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size582
Cds size582
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815578.196287-CDS-M-pyrifera_M_contig106819:42..6241622815578.196287-CDS-M-pyrifera_M_contig106819:42..624Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106819 43..624 -
1692277472.185228-CDS-M-pyrifera_M_contig106819:42..6241692277472.185228-CDS-M-pyrifera_M_contig106819:42..624Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106819 43..624 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106819.1464.1prot_M-pyrifera_M_contig106819.1464.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig106819 43..624 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig106819.1464.1

>prot_M-pyrifera_M_contig106819.1464.1 ID=prot_M-pyrifera_M_contig106819.1464.1|Name=mRNA_M-pyrifera_M_contig106819.1464.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp
EVQDFEHTIRGPLMQGRGLVTGRINDSLKAPNKGLSQALDAMAAYSNTHE
FTLSPHAKQGLSPAAQRGRELFFSKQTKCATCHSGPFYSDSNPTDKIIRH
NVGTAVDNPGELMGPEYDTPTLLGIYRTAPYLSHGKAQTLEEVLTVYNHD
DQHGVTSQLSKQERADLIEFLKALPYEDPVPQAEAAGLVKVNK*
back to top

mRNA from alignment at M-pyrifera_M_contig106819:43..624-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig106819.1464.1 ID=mRNA_M-pyrifera_M_contig106819.1464.1|Name=mRNA_M-pyrifera_M_contig106819.1464.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig106819:43..624- (Macrocystis pyrifera P11B4 male)
GAAGTCCAGGATTTTGAGCACACCATCCGCGGCCCTCTGATGCAGGGACG GGGCCTGGTCACCGGTAGAATCAACGATTCACTCAAAGCTCCCAATAAAG GACTCTCGCAGGCATTGGATGCGATGGCCGCCTATTCCAACACACACGAA TTCACCCTCAGCCCTCATGCCAAACAGGGACTCAGCCCGGCTGCCCAACG GGGACGAGAGCTCTTCTTTTCCAAGCAGACGAAGTGCGCCACCTGTCATT CCGGGCCCTTCTATTCTGATTCGAATCCCACCGACAAAATCATTCGGCAC AACGTGGGCACCGCCGTCGATAACCCCGGCGAACTGATGGGCCCCGAATA TGACACCCCTACTCTGCTGGGAATCTATCGCACTGCTCCCTATCTGTCCC ACGGAAAAGCACAGACCCTCGAAGAAGTCCTGACCGTCTACAACCATGAC GACCAGCACGGCGTTACCAGCCAGCTCTCCAAACAGGAACGGGCTGACCT CATCGAGTTTCTGAAAGCCCTCCCCTATGAAGACCCGGTCCCCCAGGCAG AAGCCGCCGGACTGGTGAAAGTTAACAAATAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig106819:43..624-

>mRNA_M-pyrifera_M_contig106819.1464.1 ID=mRNA_M-pyrifera_M_contig106819.1464.1|Name=mRNA_M-pyrifera_M_contig106819.1464.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1164bp|location=Sequence derived from alignment at M-pyrifera_M_contig106819:43..624- (Macrocystis pyrifera P11B4 male)
GAAGTCCAGGATTTTGAGCACACCATCCGCGGCCCTCTGATGCAGGGACG
GGGCCTGGTCACCGGTAGAATCAACGATTCACTCAAAGCTCCCAATAAAG
GACTCTCGCAGGCATTGGATGCGATGGCCGCCTATTCCAACACACACGAA
TTCACCCTCAGCCCTCATGCCAAACAGGGACTCAGCCCGGCTGCCCAACG
GGGACGAGAGCTCTTCTTTTCCAAGCAGACGAAGTGCGCCACCTGTCATT
CCGGGCCCTTCTATTCTGATTCGAATCCCACCGACAAAATCATTCGGCAC
AACGTGGGCACCGCCGTCGATAACCCCGGCGAACTGATGGGCCCCGAATA
TGACACCCCTACTCTGCTGGGAATCTATCGCACTGCTCCCTATCTGTCCC
ACGGAAAAGCACAGACCCTCGAAGAAGTCCTGACCGTCTACAACCATGAC
GACCAGCACGGCGTTACCAGCCAGCTCTCCAAACAGGAACGGGCTGACCT
CATCGAGTTTCTGAAAGCCCTCCCCTATGAAGACCCGGTCCCCCAGGCAG
AAGCCGCCGGACTGGTGAAAGTTAACAAATAAGAAGTCCAGGATTTTGAG
CACACCATCCGCGGCCCTCTGATGCAGGGACGGGGCCTGGTCACCGGTAG
AATCAACGATTCACTCAAAGCTCCCAATAAAGGACTCTCGCAGGCATTGG
ATGCGATGGCCGCCTATTCCAACACACACGAATTCACCCTCAGCCCTCAT
GCCAAACAGGGACTCAGCCCGGCTGCCCAACGGGGACGAGAGCTCTTCTT
TTCCAAGCAGACGAAGTGCGCCACCTGTCATTCCGGGCCCTTCTATTCTG
ATTCGAATCCCACCGACAAAATCATTCGGCACAACGTGGGCACCGCCGTC
GATAACCCCGGCGAACTGATGGGCCCCGAATATGACACCCCTACTCTGCT
GGGAATCTATCGCACTGCTCCCTATCTGTCCCACGGAAAAGCACAGACCC
TCGAAGAAGTCCTGACCGTCTACAACCATGACGACCAGCACGGCGTTACC
AGCCAGCTCTCCAAACAGGAACGGGCTGACCTCATCGAGTTTCTGAAAGC
CCTCCCCTATGAAGACCCGGTCCCCCAGGCAGAAGCCGCCGGACTGGTGA
AAGTTAACAAATAA
back to top