mRNA_M-pyrifera_M_contig106806.1462.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A7X1H9N7_9DELT (Tetratricopeptide repeat protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A7X1H9N7_9DELT) HSP 1 Score: 176 bits (447), Expect = 1.380e-48 Identity = 98/209 (46.89%), Postives = 130/209 (62.20%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFGEGPSRNRRQSPKAVWALVVEKIPLFAISILGSVLVLWAQGHTQI--SLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 W+SERKNVLST W +TM Y YV R ++ Y + + G+MSK MLVTLPC LLLLD+WPL RF F E S N Q+ ++ L+ EKIPLFA+ I+ L +AQ H SLD +P A R+ N+L++YV Y+GK ++P L YP LA ++++A GL LL++SA+ I + PY +VGWLWYLGTLVP Sbjct: 138 WMSERKNVLSTFFWMLTMGCYAAYVFRPSISRYFGMLVFFVFGLMSKPMLVTLPCVLLLLDYWPLERFSFQES-SGNHSQNNPSILKLLWEKIPLFALVIISCGLTYYAQKHGGAVKSLDYIPFADRVTNALVSYVLYIGKMMYPVKLACLYP-HPGTLAWWKVLTA--------GLFLLMVSALAIRTAKTHPYFMVGWLWYLGTLVP 336
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A533YM66_9BACT (Tetratricopeptide repeat protein n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A533YM66_9BACT) HSP 1 Score: 176 bits (445), Expect = 4.210e-48 Identity = 96/211 (45.50%), Postives = 133/211 (63.03%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFG--EGPSRNRRQSPKAVWALVVEKIPLFAISILGSVLVLWAQ--GHTQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 W+SERK+VLS W +T+ Y+RY R T+ NY+L+ ++ ALG++SKQM+VTLP LLLLD+WPLGR +FG E +R + +AL+ EK PLFA++I+GSV + Q S + P+ AR N++++Y+ YL K LWP L ++YP A+L E+ A+ LV+ VISA R+ PYL VGWLWYLG LVP Sbjct: 62 WISERKDVLSAFFWMLTLWCYLRYCERRTLRNYMLVLLAFALGVLSKQMVVTLPFVLLLLDYWPLGRLRFGLAESTIESRFGGKLSFFALLKEKAPLFALAIIGSVTIYLVQRSAGAMTSRELFPIGARFSNAIVSYIVYLRKTLWPVDLAIFYPHPGASLQAWEIGGAV--------LVVGVISAFAFWNVRRFPYLTVGWLWYLGCLVP 264
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: UPI0019FFB025 (Tetratricopeptide repeat protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FFB025) HSP 1 Score: 175 bits (443), Expect = 5.900e-48 Identity = 98/218 (44.95%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFGEGPSRNRRQSPKAV---------WALVVEKIPLFAISILGSVLVLWAQ--GHTQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 WV+ERK+VLS W +TM AY RY R ++ YLL+ +S ALG+M+K MLVTLP LLLLD+WPL R +FG+ NR ++ + LV+EK+P A++ + S + L+AQ G SL++L L RI N+L++YV Y+ K +WP GL V+YP + P V+ +GL+L+ +S + I R RPY+IVGWLWYLGTLVP Sbjct: 143 WVAERKDVLSIFFWMLTMWAYSRYAERPSLNRYLLVFLSFALGLMAKSMLVTLPFVLLLLDYWPLRRLRFGQEAGDNRLKAQGSFIPLHKRSVPLRLVLEKVPFIALAGVSSAVTLFAQQYGGAVTSLESLSLKVRIANALVSYVNYIWKMIWPEGLAVFYP--HPGMLPMWQVAG-------AGLLLVCVSFLAIRTARSRPYMIVGWLWYLGTLVP 351
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A2N2GIW5_9DELT (PMT_2 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-6 TaxID=2013756 RepID=A0A2N2GIW5_9DELT) HSP 1 Score: 173 bits (438), Expect = 1.510e-47 Identity = 99/214 (46.26%), Postives = 134/214 (62.62%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQF---GEGPSRNR--RQSPKAVWALVVEKIPLFAISILGSVLVLWAQGH--TQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 W++ERKNVLST W +TM YVRYV+R YL + + ALG+MSK MLVTLP TLLLLD+WPL R F GEGP ++ + + V L+ EKIPLF +SI+ S + L+AQ + T LD +P+ RI N++++Y Y+ K LWP L V YPL P V+ +GL LL+++ + I RK P++ VGWLWY+GTL+P Sbjct: 139 WIAERKNVLSTFFWMLTMMFYVRYVKRPVWERYLPVLLCFALGLMSKPMLVTLPFTLLLLDYWPLHRTYFNTLGEGPEKSCEIKGMKQKVSFLIAEKIPLFVLSIVFSCITLYAQHNDGTLSDLDMVPITDRISNAIVSYSLYIKKLLWPMDLAVLYPLEHI---PIWQVT-------FAGLFLLIVTTLVIKYVRKYPFMAVGWLWYMGTLIP 342
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A2V5T1B5_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5T1B5_9BACT) HSP 1 Score: 173 bits (438), Expect = 1.800e-47 Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRF-QFGEGPSRNRR----QSPKAVWALVVEKIPLFAISILGSVLVLWAQGHTQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 WVSERK+VLS + + +T+ YVRY R ++G YL +T+ ALG+MSK MLVTLP LLLLD+WPLGRF + +R RR + L +EKIPLF +S L L AQ ++D LP R+ N+ ++YVTY+ + WPA L V+YP L P +++ A+ L+V+S I R+K PY++ GWLWYLG LVP Sbjct: 42 WVSERKDVLSAVFFMLTLGLYVRYARAPSLGRYLAVTVLFALGLMSKPMLVTLPFVLLLLDYWPLGRFDKAASAVARGRRVFWLDRRSTIQRLFLEKIPLFVLSALSCGATLLAQSKDAGAIDQLPFIWRLNNAFVSYVTYISEMFWPARLAVFYPHPNNQLTPWQIIMAIT--------FLVVVSLAAISLRKKNPYILTGWLWYLGMLVP 245
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A661TBI2_9DELT (PMT_2 domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661TBI2_9DELT) HSP 1 Score: 172 bits (435), Expect = 2.340e-47 Identity = 94/210 (44.76%), Postives = 131/210 (62.38%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFGEGPSRNRRQSP-KAVWALVVEKIPLFAISILGSVLVLWAQGHTQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISA--VCILQRRKRPYLIVGWLWYLGTLVP 621 W+SERK+VLSTL W +TM AY YV G Y+ + + +G+M+K MLVTLP LLL+DFWPL RF+ +N + SP +V L+ EK+P F I+ + S++ + AQG +LD+LPL+ R+ N I+Y YL K +WP+ L V+YP P+ +P +SG VLL++S + I RK PYL VGWLW++GTLVP Sbjct: 121 WISERKDVLSTLFWLLTMYAYACYVEVPKTGRYIAVLLLYIMGLMAKPMLVTLPFVLLLMDFWPLNRFRPFPADEKNSQSSPGTSVQRLIFEKVPFFVIAFVFSIICVIAQGKAVQTLDSLPLSLRLLNVFISYSQYLSKTIWPSHLSVFYPY------PES-----YPVWQVSGAVLLLVSVSVIMICTARKYPYLAVGWLWFIGTLVP 319
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A2V9SZI9_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9SZI9_9BACT) HSP 1 Score: 174 bits (441), Expect = 2.950e-47 Identity = 96/207 (46.38%), Postives = 134/207 (64.73%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFGEGPSRNRRQSPKAVWALVVEKIPLFAISILGSVLVLWAQGHTQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 W+SERK+VLS + + +T+ AYVRYVR+ ++G+Y++++I +ALG+MSK MLVT+P LLL+D+WPL RF G N+R ++ EKIPL +S+ S + WAQ + ++ LPL RI N+L+T VTYL + +WPA L V+YP P++ + L A A+ L L I+AV IL R KRPYLI GW WYL L P Sbjct: 127 WISERKDVLSAVFFMLTLGAYVRYVRQPSLGHYVMMSILVALGLMSKPMLVTVPFVLLLVDYWPLRRFA---GRRINQR--------IIFEKIPLLVLSVALSAVTFWAQTRGMVPVEKLPLMERINNALVTCVTYLQQMIWPARLAVFYP------HPEDRLQLLQVALAVGLLTL--ITAVAILLRHKRPYLITGWFWYLAMLAP 314
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A538P015_9BACT (Tetratricopeptide repeat protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A538P015_9BACT) HSP 1 Score: 173 bits (438), Expect = 6.420e-47 Identity = 98/216 (45.37%), Postives = 131/216 (60.65%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFGEGPSRNRRQSPKAVWA--------LVVEKIPLFAISILGSVLVLWAQGHTQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSAL-FPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 WV+ERK+VLS + + +T+ AYVRYVR ++G Y+ + ALG+MSK MLVTLP LLLLD+WPL RF E PS + +S W L++EKIPL A+S V L AQG S+D LP R+ N+ ++YVTYL + WPA L V+YP L E++ A+ F AAA + + +L R+KRPY++ GW WYLG LVP Sbjct: 148 WVAERKDVLSAVFFMLTLGAYVRYVRAPSIGRYVAVAFLFALGLMSKPMLVTLPFVLLLLDYWPLRRF---EKPSSAKSKSKSRSWLDRQSIPRQLILEKIPLLALSAGSCVATLVAQGQRTGSIDQLPFLWRVNNAFVSYVTYLWEMFWPARLAVFYPHPNNRLPVWEILLAIAFLAAA---------TVIALLLRKKRPYILTGWFWYLGMLVP 351
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A3A4SM13_9DELT (Tetratricopeptide repeat protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4SM13_9DELT) HSP 1 Score: 172 bits (436), Expect = 1.320e-46 Identity = 89/212 (41.98%), Postives = 139/212 (65.57%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFGEG---PSRNRRQSPKAVWALVVEKIPLFAISILGSVLVLWAQGHTQ--ISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 W++ERKN+LST W +TM AY+RY R+ T+ YL++ +++ALG+++K MLVTLPC LLLLD+WP+GR +FG+ S + S + + L++EK+PL +S++ + + ++ H + I+L PL+ R+EN+L++Y+TYL K +WPA L V+YP P E+ F + ++LL IS + + + PY +GW WYLGTLVP Sbjct: 152 WIAERKNLLSTTFWMLTMLAYIRYARKPTIARYLIVFLTLALGLLAKPMLVTLPCVLLLLDYWPMGRMRFGQSLPIGSETKFHSNR-LSRLMMEKVPLIVLSLIITGIFAYSLQHNRQLINLTNSPLSLRLENALVSYITYLWKLIWPAKLAVFYPY------PKEIP---FWKTLGAAMLLLTISIPMMTRIKTNPYFSIGWFWYLGTLVP 353
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Match: A0A7V3VZX5_9BACT (Tetratricopeptide repeat protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7V3VZX5_9BACT) HSP 1 Score: 172 bits (435), Expect = 1.520e-46 Identity = 96/207 (46.38%), Postives = 125/207 (60.39%), Query Frame = 1 Query: 1 WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLVTLPCTLLLLDFWPLGRFQFGEGPSRNRRQSPKAVWALVVEKIPLFAISILGSVLVLWAQGHTQISLDTLPLAARIENSLITYVTYLGKFLWPAGLIVYYPLRTANLAPDEMVSALFPAAALSGLVLLVISAVCILQRRKRPYLIVGWLWYLGTLVP 621 WV+ERK+VLSTL W +T+ AY Y + G YLL + ALG+M+K MLVTLPC LLLLDFWPL R G W LV EK+P FA++ S+L + AQ H SLD LPL R+ N+ + Y+ Y+ WP L VYYP ++++ F AA++ +LL ++A+ Q R+RPYL VGWLWYLGTLVP Sbjct: 142 WVAERKDVLSTLFWMLTLWAYSAYAAQPGGGRYLLTLVLFALGLMAKPMLVTLPCVLLLLDFWPLQRRGVG--------------WGLVKEKLPFFALAAGCSLLTVAAQQHIMQSLDLLPLPYRLANAPLAYLAYVRMMFWPRHLAVYYPHPGSDIS--------FTLAAVAAGLLLAVTALTFWQARRRPYLAVGWLWYLGTLVP 326 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106806.1462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106806.1462.1 >prot_M-pyrifera_M_contig106806.1462.1 ID=prot_M-pyrifera_M_contig106806.1462.1|Name=mRNA_M-pyrifera_M_contig106806.1462.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp WVSERKNVLSTLLWFVTMAAYVRYVRRSTVGNYLLLTISMALGMMSKQMLback to top mRNA from alignment at M-pyrifera_M_contig106806:3..623+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106806.1462.1 ID=mRNA_M-pyrifera_M_contig106806.1462.1|Name=mRNA_M-pyrifera_M_contig106806.1462.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig106806:3..623+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106806:3..623+ >mRNA_M-pyrifera_M_contig106806.1462.1 ID=mRNA_M-pyrifera_M_contig106806.1462.1|Name=mRNA_M-pyrifera_M_contig106806.1462.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig106806:3..623+ (Macrocystis pyrifera P11B4 male)back to top |