mRNA_M-pyrifera_M_contig106636.1433.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A7C1UCQ4_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UCQ4_9ACTN) HSP 1 Score: 310 bits (793), Expect = 1.230e-102 Identity = 137/208 (65.87%), Postives = 162/208 (77.88%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDGIPDAATEPVLITGQPDAFAREENRGGIAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPDF TEGAQA G GP GMRLPTG+++HE RLV+ADAWNHRLLIWDEVP ++ R PDHI+GQ +EEN GG CGPL MYWPFGLAM+DG+ +VADTGNRR+L WDG+P+ P L+ GQ + R ENRG + P +RWPHD+AGT D LFV+DAGNHR+LGW + + D AD VLGQTDF + GEFPY PQ+ATALRFPY Sbjct: 77 GQPDFRTEGAQAAGRGPEKGMRLPTGIVIHEGRLVIADAWNHRLLIWDEVPTQTDRAPDHIIGQPDATVVEENSGGECGPLTMYWPFGLAMIDGRLFVADTGNRRILAWDGLPEPGRVPDLLMGQDEFTQRVENRGAVGPRGYRWPHDMAGTGDFLFVSDAGNHRILGWRPAPTADVDADLVLGQTDFETAGEFPYGPQSATALRFPY 284
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A2E0RLX0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RLX0_9ACTN) HSP 1 Score: 301 bits (770), Expect = 6.410e-99 Identity = 135/208 (64.90%), Postives = 157/208 (75.48%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDGIPDAATEPVLITGQPDAFAREENRGGIAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPD +EGAQA G GP GMRLPTGVIVH++RLVVADAWNHRLL+WD VPE S PDH++GQ P ++ENRGG CGP G YWPFG+AMV G+ +VADTGNRR+L WDGIP+ P ++ GQ D +R+ENRG + P SFRWPHDVAGT R VADAGNHR+LGW D AD V GQ DFV+ GEFPY QTA++LRFPY Sbjct: 93 GQPDMTSEGAQAAGRGPERGMRLPTGVIVHDDRLVVADAWNHRLLVWDSVPETSDLAPDHVIGQPDPAAVDENRGGPCGPTGFYWPFGVAMVAGRCWVADTGNRRMLAWDGIPEPGQAPAVVLGQADGHSRDENRGELGPASFRWPHDVAGTDARFMVADAGNHRLLGWEPMPGGDVGADLVFGQPDFVTAGEFPYQAQTASSLRFPY 300
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A2W4NW32_9ACTN (Uncharacterized protein n=2 Tax=Actinomycetia TaxID=1760 RepID=A0A2W4NW32_9ACTN) HSP 1 Score: 271 bits (693), Expect = 4.190e-87 Identity = 132/211 (62.56%), Postives = 150/211 (71.09%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDG-IPDAATEPV-LITGQPDAFAREENRG-GIAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPD +EG AGG GP +GM LPTGV+VH+ RLVVADAW+HR+L+WD VPE+S RPPD ++GQ P E NRGG C + MYWP+G+A+ G+FYVADTGNRRVL W G IPD+ P L+ GQP AREENRG G P SFRWPHD+AGT D L VADAGNHRVLGW D AD VLGQ D S EFPY PQ LRFPY Sbjct: 96 GQPDGESEGPAAGGRGPEHGMHLPTGVLVHDGRLVVADAWHHRVLVWDRVPEDSGRPPDLVLGQPDPSAAEPNRGGDCSAVTMYWPYGVAVAGGRFYVADTGNRRVLGWSGGIPDSPDRPADLVLGQPGPQAREENRGEGAGPRSFRWPHDIAGTGDLLLVADAGNHRVLGWHPHPEADRDADLVLGQPDCHSTAEFPYGPQRPDRLRFPY 306
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A511D6X2_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardia asaccharolytica DSM 44247 = NBRC 16224 TaxID=1123024 RepID=A0A511D6X2_9PSEU) HSP 1 Score: 270 bits (691), Expect = 4.350e-87 Identity = 130/210 (61.90%), Postives = 149/210 (70.95%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDG-IPDAATEPVLITGQPDAFAREENRGG-IAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPD TEG AGG GP GM LPTGV+VHE RL+VADAW+HR+L+W+EVP ES R PD I+GQ P IE NRG C YWPFG+ +V G+FYVADTGNRRVL WDG IP+ L+ GQPD AREENRGG +AP+SFRWPHD+AGT + L +ADAGNHRVLGW D AD +LGQ D S E+PY PQ LRFPY Sbjct: 85 GQPDGTTEGRAAGGRGPERGMNLPTGVLVHEGRLIVADAWHHRVLVWNEVPRESDRAPDLILGQPDPASIEPNRGTECSANTFYWPFGIDVVGGRFYVADTGNRRVLAWDGGIPETDRPADLVLGQPDPAAREENRGGAVAPNSFRWPHDIAGTDELLLIADAGNHRVLGWPQHPDADRDADVLLGQADMGSAVEWPYGPQRGDRLRFPY 294
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A132MV13_9ACTN (NHL repeat containing protein n=2 Tax=Carbonactinospora thermoautotrophica TaxID=1469144 RepID=A0A132MV13_9ACTN) HSP 1 Score: 265 bits (677), Expect = 5.850e-85 Identity = 126/211 (59.72%), Postives = 146/211 (69.19%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVW-DGIPDAATEPV-LITGQPDAFAREENRGG-IAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPD TEG AGG GP GM LPTGV+VH+ RL+VADAW+HR+L+WDEVP S +PPD ++GQ E NRG C MYWP+G+ ++DG FYVADTGNRRVL W DGIPD+ P L+ GQPD +REENRG + P SFRWPHDV GTA L VADAGNHRV+GW D AD +LGQ DF + EFPY PQ RFPY Sbjct: 85 GQPDGTTEGPAAGGRGPERGMHLPTGVLVHDGRLIVADAWHHRILVWDEVPRRSDQPPDLVLGQPDVSSAEPNRGAQCSACSMYWPYGVGIIDGWFYVADTGNRRVLGWADGIPDSPDVPADLVLGQPDPSSREENRGEQVGPASFRWPHDVTGTAGLLLVADAGNHRVVGWRPLPEADRDADLLLGQPDFQTASEFPYGPQRGDRFRFPY 295
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A502EJX3_9MYCO (Uncharacterized protein n=3 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A502EJX3_9MYCO) HSP 1 Score: 263 bits (673), Expect = 2.650e-84 Identity = 123/210 (58.57%), Postives = 145/210 (69.05%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDG-IPDAATEPVLITGQPDAFAREENRGGIA-PDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPD TEG A G GP GM LPTGV+VHE RL+VADAW+HR+L+WDEVP PPDH++GQ P + N+GG C YWPFG+A+V +F+VADTGNRRVL WDG IP ++ GQPDA REENRGG A P SFRWPHD+ GT D L VADAG+HR+LGW VD AD V+GQ+DF + E+PY P T RFPY Sbjct: 90 GQPDGTTEGRAANGRGPERGMNLPTGVLVHEGRLIVADAWHHRILVWDEVPVLDDTPPDHVLGQPDPNSVLPNQGGECSASTFYWPFGIAIVGSRFWVADTGNRRVLGWDGGIPTPGRAADVVLGQPDAMHREENRGGDAGPASFRWPHDITGTDDLLLVADAGDHRILGWSPHPDVDGPADTVIGQSDFTTSTEWPYGPHTGDRFRFPY 299
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: UPI001F1F9554 (NHL repeat-containing protein n=1 Tax=Mycobacterium sp. MBM TaxID=2911369 RepID=UPI001F1F9554) HSP 1 Score: 263 bits (671), Expect = 6.530e-84 Identity = 123/210 (58.57%), Postives = 146/210 (69.52%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDG-IPDAATEPVLITGQPDAFAREENRGGIA-PDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPD TEG A G GP GM LPTGV+VH+ RL+VADAW+HR+L+WDEVP S PPDH++GQ + N+G C YWPFG+A++ G+F+VADTGNRRVL WDG IPD ++ GQPD REENRGG A P SFRWPHD+AG AD L VADAG+HR+LGW A D+ AD V+GQ DF S E+PY P T RFPY Sbjct: 97 GQPDGTTEGRAANGRGPERGMNLPTGVLVHKGRLIVADAWHHRILVWDEVPVLSDTPPDHVLGQPDSRSVAPNQGQRCSASTFYWPFGIAVIGGRFWVADTGNRRVLGWDGGIPDPGRPADIVLGQPDEHHREENRGGAAGPASFRWPHDLAGDADLLLVADAGDHRILGWSAHPDSDAPADIVIGQPDFTSAAEWPYGPHTGDRFRFPY 306
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A433BNY8_9MYCO (Uncharacterized protein n=1 Tax=Mycolicibacterium sp. TaxID=2320850 RepID=A0A433BNY8_9MYCO) HSP 1 Score: 262 bits (669), Expect = 1.520e-83 Identity = 125/210 (59.52%), Postives = 145/210 (69.05%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWD-GIPDAATEPVLITGQPDAFAREENRGG-IAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQ D +TEG AGG GP GM LPTGV+VH+ERLVVADAW+HR+LIWD VP S PPD I+GQ +E NRG C YWPFG+AMV +F+VADTGNRRVL WD GIPD ++ GQPDA AR+ENRGG + P SFRWPHD+ G D L +ADAG+HR+LGW + D AD VLGQ DF S E+PY P T RFPY Sbjct: 97 GQRDGVTEGRGAGGRGPERGMNLPTGVLVHDERLVVADAWHHRILIWDTVPRTSDTPPDVIIGQPDASSVEPNRGAGCSASTFYWPFGIAMVGSRFWVADTGNRRVLGWDNGIPDPDQPADIVLGQPDAGARDENRGGAVGPASFRWPHDITGNDDLLLIADAGDHRLLGWSPLPAQDRDADIVLGQPDFTSADEWPYGPHTGERFRFPY 306
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A7C3GDP1_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3GDP1_9CHLR) HSP 1 Score: 258 bits (660), Expect = 1.530e-83 Identity = 120/209 (57.42%), Postives = 152/209 (72.73%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDGIPDAATEPVLITGQPDAFAREENRG-GIAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPDF +EG AGG G NG+ LPTGV + E + VADAWNHR+L+W+++P +S+ PPD+++GQ + + ++RGGA L MYWPFG+A V G+FYV DTGNRRVLVW G+P A P LI GQ D ENRG G A ++FRWPHDVAGTAD L++ADAGNHRVLGW V+ D AD V+GQ DFV E+PY + A+++RFPY Sbjct: 83 GQPDFYSEGPNAGGRGAENGVHLPTGVAIFEGKFFVADAWNHRVLVWNQLPTQSNTPPDYVLGQANLREVSKDRGGAVSALSMYWPFGIAYVAGKFYVTDTGNRRVLVWHGLPTAEQPPDLIMGQDDPTLGLENRGMGAAGNTFRWPHDVAGTADVLYIADAGNHRVLGWRGEVA-DRVADLVIGQKDFVDSAEWPYGDKNASSMRFPY 290
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Match: A0A1M6SMF8_PSETH (Uncharacterized protein n=1 Tax=Pseudonocardia thermophila TaxID=1848 RepID=A0A1M6SMF8_PSETH) HSP 1 Score: 261 bits (668), Expect = 2.340e-83 Identity = 121/210 (57.62%), Postives = 144/210 (68.57%), Query Frame = 1 Query: 1 GQPDFMTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSRPPDHIVGQCSPFGIEENRGGACGPLGMYWPFGLAMVDGQFYVADTGNRRVLVWDG-IPDAATEPVLITGQPDAFAREENRG-GIAPDSFRWPHDVAGTADRLFVADAGNHRVLGWGASVSVDSAADQVLGQTDFVSGGEFPYAPQTATALRFPY 624 GQPD TEG AGG GP GM LPTGV+VH+ RL+VADAW+HR+L+WDEVP+ PDH++GQ +E NRGG C MYWPFG+A+VDG F+VADTGNRRVL W G +P+ ++ GQP R+ENRG G+ P SFRWPH + G L VADAGNHRVLGW + D AD V+GQ DF + EFPYAPQT RFPY Sbjct: 98 GQPDATTEGRAAGGRGPERGMNLPTGVLVHDGRLIVADAWHHRILVWDEVPQRDDAAPDHVLGQPDASSVEANRGGECDAASMYWPFGIAVVDGVFWVADTGNRRVLGWTGGVPEPGRPADVVLGQPGPAERQENRGEGVGPASFRWPHAITGREGLLLVADAGNHRVLGWRPAPDADRPADLVVGQPDFHTADEFPYAPQTGDRFRFPY 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106636.1433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106636.1433.1 >prot_M-pyrifera_M_contig106636.1433.1 ID=prot_M-pyrifera_M_contig106636.1433.1|Name=mRNA_M-pyrifera_M_contig106636.1433.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp MTEGAQAGGLGPANGMRLPTGVIVHEERLVVADAWNHRLLIWDEVPEESSback to top mRNA from alignment at M-pyrifera_M_contig106636:2..625+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106636.1433.1 ID=mRNA_M-pyrifera_M_contig106636.1433.1|Name=mRNA_M-pyrifera_M_contig106636.1433.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig106636:2..625+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106636:2..625+ >mRNA_M-pyrifera_M_contig106636.1433.1 ID=mRNA_M-pyrifera_M_contig106636.1433.1|Name=mRNA_M-pyrifera_M_contig106636.1433.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig106636:2..625+ (Macrocystis pyrifera P11B4 male)back to top |