mRNA_M-pyrifera_M_contig105574.1198.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A6I6A888_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6A888_9PLAN) HSP 1 Score: 351 bits (900), Expect = 1.480e-110 Identity = 203/211 (96.21%), Postives = 205/211 (97.16%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 633 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYG AFSQ+QTGTIDDLTGQV SLSAT DT +LGIDGQLLFARIRFDSLA DQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQ NIIYPTNYPDA Sbjct: 778 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGTAFSQSQTGTIDDLTGQVISLSATADTNELGIDGQLLFARIRFDSLAADQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQTNIIYPTNYPDA 988
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A5A8ATH4_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A5A8ATH4_9PLAN) HSP 1 Score: 356 bits (913), Expect = 5.290e-110 Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 633 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYG AFSQNQTGTI+DLTGQVTSLSATVDT DLGIDGQLLFARIRFDSLADDQVLLDLEGQS GPYDLGLQIQSPQITLGSGR+SQTPI+DSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSD+AWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA Sbjct: 2379 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGTAFSQNQTGTINDLTGQVTSLSATVDTNDLGIDGQLLFARIRFDSLADDQVLLDLEGQSNGPYDLGLQIQSPQITLGSGRVSQTPIVDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDFAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 2589
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A518FI17_9PLAN (Uncharacterized protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FI17_9PLAN) HSP 1 Score: 265 bits (677), Expect = 2.810e-78 Identity = 154/211 (72.99%), Postives = 177/211 (83.89%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 633 WVE WV+T D AS GIA+V+LDL+Y TDFT+AT+IEYG+AFS NQ G IDD TG + +L+AT D DLGI+ QLLFARI F++LADDQVLLD + QSIGP+DL LQ+QSP+++LGSGR SQTPIIDS GA IWANPYDLNDDD I+FRDL+LF + YNSVPAESSSDYAWFS XXXXXXXXXXXXXXXXXXX+ K Q I YP NYPDA Sbjct: 2338 WVEIWVSTEDNASQGIASVSLDLSYLTDFTSATEIEYGSAFSLNQGGVIDDQTGLIANLAATADLADLGINTQLLFARIHFEALADDQVLLDFDQQSIGPHDLALQMQSPEVSLGSGRTSQTPIIDSTGADIWANPYDLNDDDAINFRDLILFVTAYNSVPAESSSDYAWFSDYXXXXXXXXXXXXXXXXXXXRLKSQQLEIQYPDNYPDA 2548
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A518FL78_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FL78_9PLAN) HSP 1 Score: 258 bits (659), Expect = 7.320e-76 Identity = 145/211 (68.72%), Postives = 173/211 (81.99%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 633 W+E WV+T D++S G A + LDL+Y TDFT+AT IEYG+AFSQNQTG I+D TGQ+T+LSAT +T DLG++ QLLFARIRF+SLA DQVLL+LE QSIGP+DL Q+QS Q+ LG+ R+SQTP+ID+ GA IWANPYDLNDDD I+FRDL+LF SVYNS+PAES SDY W S XXXXXXXXXXXXXXXX K K++Q I YP NYP A Sbjct: 1950 WLEIWVSTEDLSSQGFAAIDLDLSYLTDFTSATGIEYGSAFSQNQTGIINDHTGQITNLSATAETTDLGVNSQLLFARIRFESLAGDQVLLNLEEQSIGPHDLAFQLQSSQLVLGNARVSQTPMIDTLGADIWANPYDLNDDDAINFRDLILFVSVYNSIPAESGSDYGWVSDFXXXXXXXXXXXXXXXXNYGKRKVNQTEINYPDNYPVA 2160
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A518A4G0_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A4G0_9PLAN) HSP 1 Score: 244 bits (624), Expect = 3.630e-71 Identity = 144/204 (70.59%), Postives = 167/204 (81.86%), Query Frame = 1 Query: 16 VNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYP 627 V+T D+ S GIATV+LDL YQTDFT+AT+I YG AFSQNQ+GTIDD +G V +LSATVDT DLGI+ QLLFARI+F+SLADDQVLLDL GQSIGP+DLG I + Q++LGS R++ P+I+S GA IWANPYDLNDDD I+FRDL+LF SVYNSVPAES SDY WFS XXXXXXXXXXXXXXXX + K + I YP NYP Sbjct: 1400 VSTEDLLSQGIATVSLDLGYQTDFTSATEIGYGPAFSQNQSGTIDDPSGLVGNLSATVDTTDLGINSQLLFARIKFESLADDQVLLDLAGQSIGPHDLGFGILNSQLSLGSERVNDAPVINSLGADIWANPYDLNDDDAINFRDLILFVSVYNSVPAESGSDYGWFSDFXXXXXXXXXXXXXXXXNYGRRKEDHSAINYPDNYP 1603
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A6I6A6K4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6A6K4_9PLAN) HSP 1 Score: 244 bits (623), Expect = 5.260e-71 Identity = 147/209 (70.33%), Postives = 167/209 (79.90%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYP 627 W+E WV+T D+ S GIA+V+LDL Y TD T+AT IE+GAAFSQNQ+GTI+D G V LSAT D DLGI+ LLFARIRF+SLA+D VLLDLEGQ IGP+DLG QIQ+ QI LGS R+SQ +D A IWANPYDLNDDD+I FRDLLLFASVYNS AESSS YAWFS XXXXXXXXXXXXXXXXXXK+K+ Q +IYP NYP Sbjct: 6900 WLELWVSTEDLNSQGIASVSLDLAYLTDLTSATGIEFGAAFSQNQSGTINDEDGLVEGLSATTDLTDLGINTLLLFARIRFESLAEDNVLLDLEGQRIGPHDLGFQIQNSQIGLGSERVSQNANVDHSAAVIWANPYDLNDDDQIGFRDLLLFASVYNSFTAESSSQYAWFSDFNXXXXXXXXXXXXXXXXXXKSKVQQQEVIYPNNYP 7108
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A2E7KGR8_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KGR8_9PLAN) HSP 1 Score: 243 bits (620), Expect = 6.980e-71 Identity = 148/211 (70.14%), Postives = 175/211 (82.94%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 633 WVE WV+T D+ SLGIA+V+LDL+YQTD T+AT IE+GAAFSQNQ+G+I+D G V LSAT +DLGI+ Q+LFARIRF+SLA D+VLLDLEGQ IGP+DL Q+QS QI LGS R+SQ D A+IWANP+DLNDD +ISFRDLLLFASVYNSV +SSS+YAW SXXXXXXXXXXXXXXXXXXXXXK++L Q +IYP NYP+A Sbjct: 778 WVELWVSTGDLNSLGIASVSLDLDYQTDLTSATSIEFGAAFSQNQSGSINDENGLVEGLSATTGLMDLGINAQILFARIRFESLAGDEVLLDLEGQRIGPHDLEFQLQSIQIGLGSERVSQNANADHSTAAIWANPFDLNDDGQISFRDLLLFASVYNSVVVDSSSEYAWMSXXXXXXXXXXXXXXXXXXXXXKSRLQQQEVIYPNNYPEA 988
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A5A8AS22_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8AS22_9PLAN) HSP 1 Score: 241 bits (614), Expect = 8.430e-70 Identity = 149/209 (71.29%), Postives = 168/209 (80.38%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYP 627 W+E WV+T D+ S GI +V+LDL Y TD T+AT IEYGAAFSQNQ+GTI+D G V LSAT D DLGI+ QLLFARIRF+SLA+D VLLDLEGQ IGP+D G QIQ+ QI L S R+SQ I D A+IWANP+DLNDD +ISFRDLLLFASVYNS AESSS YAWFS XXXXXXXXXXXXXXXXXXXXK+KL Q +IYP NYP Sbjct: 4361 WLELWVSTEDLNSQGITSVSLDLAYLTDLTSATGIEYGAAFSQNQSGTINDENGLVEGLSATTDLTDLGINTQLLFARIRFESLAEDNVLLDLEGQRIGPHDPGFQIQTLQIGLASERVSQNAIEDHTAAAIWANPFDLNDDGQISFRDLLLFASVYNSFTAESSSQYAWFSDXXXXXXXXXXXXXXXXXXXXKSKLLQQQVIYPNNYP 4569
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A518AA54_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AA54_9PLAN) HSP 1 Score: 224 bits (571), Expect = 1.550e-64 Identity = 133/211 (63.03%), Postives = 167/211 (79.15%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 633 WVE WV+T D+ + G+A VTLDL+Y+T++TTAT+IE+GAAF+QNQ+GTI+DL G V +LSA DLG++GQLLFARI+++SLA+DQV LDL G IGPY+L LQI +PQ+ L +S+ DSPGA IWANP+DLNDDD I+FRDL+LF S Y +P++SSS YAWF+XXXXXXXXXXXXXXXXXXXXX K + I YP N+P A Sbjct: 589 WVEIWVSTSDLNTQGVAAVTLDLSYKTEYTTATEIEFGAAFTQNQSGTINDLDGLVENLSAATTQDDLGMNGQLLFARIKYESLAEDQVPLDLSGPGIGPYNLNLQILTPQLRLTDNSVSEPETNDSPGAGIWANPFDLNDDDAINFRDLILFVSAYGEIPSQSSSPYAWFAXXXXXXXXXXXXXXXXXXXXXXRKSDHSAINYPDNFPTA 799
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Match: A0A517VWA2_9PLAN (50S ribosomal protein L24 n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VWA2_9PLAN) HSP 1 Score: 214 bits (545), Expect = 1.560e-60 Identity = 121/211 (57.35%), Postives = 152/211 (72.04%), Query Frame = 1 Query: 1 WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDDLTGQVTSLSATVDTIDLGIDGQLLFARIRFDSLADDQVLLDLEGQSIGPYDLGLQIQSPQITLGSGRISQTPIIDSPGASIWANPYDLNDDDRISFRDLLLFASVYNSVPAESSSDYAWFSXXXXXXXXXXXXXXXXXXXXXKTKLSQANIIYPTNYPDA 633 WVE WVN + GI +V LDLNY T+FT+ATDIE+GA+FSQNQ GTI+D G V L A + +LGI G LLFARI+F+ LA+DQV LDL G+SIGPYDLG I S Q+ L T +++ GA IWANP+DL+DDD I+F+DL+LFASVY ++P+ES+SD +WF+ XXXXXXXXXXXX K+KL Q I YP N+P+A Sbjct: 3251 WVEIWVNASSPTNQGIFSVELDLNYHTEFTSATDIEFGASFSQNQAGTINDALGTVEGLFAETNASELGIAGHLLFARIKFEPLAEDQVELDLPGRSIGPYDLGFNINSQQVHLDGNIPVTTNLVEFAGADIWANPFDLDDDDAINFKDLMLFASVYQTIPSESASDLSWFADYNQNNXXXXXXXXXXXXNYNKSKLGQTAITYPQNFPEA 3461 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105574.1198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105574.1198.1 >prot_M-pyrifera_M_contig105574.1198.1 ID=prot_M-pyrifera_M_contig105574.1198.1|Name=mRNA_M-pyrifera_M_contig105574.1198.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp WVEFWVNTIDVASLGIATVTLDLNYQTDFTTATDIEYGAAFSQNQTGTIDback to top mRNA from alignment at M-pyrifera_M_contig105574:1..633- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105574.1198.1 ID=mRNA_M-pyrifera_M_contig105574.1198.1|Name=mRNA_M-pyrifera_M_contig105574.1198.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig105574:1..633- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105574:1..633- >mRNA_M-pyrifera_M_contig105574.1198.1 ID=mRNA_M-pyrifera_M_contig105574.1198.1|Name=mRNA_M-pyrifera_M_contig105574.1198.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig105574:1..633- (Macrocystis pyrifera P11B4 male)back to top |