mRNA_M-pyrifera_M_contig105228.1120.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A2D8GDW2_9ACTN (NADH-quinone oxidoreductase chain 13 n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GDW2_9ACTN) HSP 1 Score: 331 bits (849), Expect = 5.560e-109 Identity = 171/213 (80.28%), Postives = 189/213 (88.73%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLT-GAETGDY--TFNMLALSENAGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 K+WA+ VSL+ LGLGI +L DF+YDQAG Q+ VD WI+VIGAGYT+GVDGMSLPLIALTVLVMPLVF+YSWNHIPSPGNTK+FL+LMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGG+DRRYASLKFFLYTLFGSALMLL FLALFFL TG++ TF+M L++ AG GI RS+QL IFGGMFIGFGVKVPM PFHTW Sbjct: 32 KRWALAVSLVALGLGIAMLFDFNYDQAGQLQWVVDEPWIDVIGAGYTLGVDGMSLPLIALTVLVMPLVFLYSWNHIPSPGNTKSFLILMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGDDRRYASLKFFLYTLFGSALMLLGFLALFFLAKDPVTGEFLRTFDMRELTDTAGAGIARSSQLLIFGGMFIGFGVKVPMFPFHTW 244
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A7K1ZDX2_9ACTN (NADH-quinone oxidoreductase subunit M n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZDX2_9ACTN) HSP 1 Score: 330 bits (846), Expect = 1.530e-108 Identity = 167/210 (79.52%), Postives = 186/210 (88.57%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLTGAETGDYTFNMLALSENAGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 KQ A+L SL+TLGL FLL+DF+Y A QYFVDT+WIEVIGAGYT+GVDGMSLPLIALT L+MPLVF+YSWNHIP PGN KAFL+L LILETGMIGTFVAQDL+LFFVFFEVVLLPMFFMIAVWGGE+RRYASLKFFL+TLFGSALMLLSFLAL+FLT A+T F+ML L+ENAG+GI R TQL +F GMF+GFGVKVPM PFHTW Sbjct: 37 KQVALLTSLVTLGLAAFLLIDFNYGDAENLQYFVDTQWIEVIGAGYTIGVDGMSLPLIALTALIMPLVFVYSWNHIPEPGNAKAFLILSLILETGMIGTFVAQDLVLFFVFFEVVLLPMFFMIAVWGGENRRYASLKFFLFTLFGSALMLLSFLALYFLTEADT----FSMLVLTENAGEGITRGTQLLVFAGMFLGFGVKVPMFPFHTW 242
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A7Y2GKX7_9ACTN (NADH-quinone oxidoreductase subunit M n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKX7_9ACTN) HSP 1 Score: 295 bits (756), Expect = 6.060e-95 Identity = 142/210 (67.62%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLTGAETGDYTFNMLALSENAGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 K +A+ +S+ L +++ ++FDYD AG Q+ ++EWIE I +GYT+G+DG+SLP+I LTVL++PL IYSW+H P P N KAFL L+L+LETGM+GTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALML+SF+A++FL G E G+ TFN++ALS+ AG G+ RST L+IFGGMF+GF +KVPM PFHTW Sbjct: 28 KLFALAISMAVGALAVWIAIEFDYDNAGTLQFLRNSEWIEAINSGYTLGIDGISLPMILLTVLIVPLCIIYSWDHFPEPHNPKAFLALILVLETGMLGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLVSFMAVYFLAGDEIGERTFNLIALSDWAGAGLARSTGLWIFGGMFLGFAIKVPMFPFHTW 237
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A6B0WNF5_9ACTN (NADH-quinone oxidoreductase subunit M n=10 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WNF5_9ACTN) HSP 1 Score: 293 bits (749), Expect = 4.170e-94 Identity = 153/213 (71.83%), Postives = 179/213 (84.04%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFL-TGAETGDY--TFNMLALSENAGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 KQ A+L SL+ + +G LL+DFDY AGA QY VD WIEVI + Y +G+DG+SLPL+ALT++V+PL IYSW+HIP PGN KAF +LMLILETGM+GTFVAQDLILFFVFFEVVLLPMFFMIAVWGGE+RRYAS+KFFL+TLFGSALMLLSFLALFFL T TG+ TF+M LS+ AG GI+ +TQ++IF GMFIGFGVKVPM PFHTW Sbjct: 36 KQLALLSSLLAMVIGGLLLIDFDYGNAGALQYVVDARWIEVINSRYILGLDGISLPLMALTLVVVPLCVIYSWDHIPEPGNPKAFFVLMLILETGMVGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGENRRYASIKFFLFTLFGSALMLLSFLALFFLSTDPATGESLRTFDMRVLSDVAGAGILGATQIWIFAGMFIGFGVKVPMFPFHTW 248
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A3M2GUZ1_ACTSX (NADH-quinone oxidoreductase subunit M (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GUZ1_ACTSX) HSP 1 Score: 287 bits (734), Expect = 5.960e-94 Identity = 147/200 (73.50%), Postives = 171/200 (85.50%), Query Frame = 1 Query: 40 LGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLT-GAETGD--YTFNMLALSENAGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 LG+ LL+DFDYD AG QY VD WI+ I + Y + VDG+SLPL+ALT+LV+PLV IYSWNHIP PGNTKAFL+L L+L+ GM+G+FVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFL+TLFGSALMLLSFLALFFL+ +G+ +TF+M ALS+ AG G+V STQL+IF G+ IGFGVKVPM PFHTW Sbjct: 45 LGVLLLIDFDYDAAGQLQYTVDKSWIDAINSRYIVAVDGISLPLLALTLLVVPLVIIYSWNHIPEPGNTKAFLILTLVLDVGMLGSFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLFTLFGSALMLLSFLALFFLSKDPASGELLHTFDMRALSDVAGAGLVHSTQLWIFAGLLIGFGVKVPMFPFHTW 244
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A7Y1XTC7_9ACTN (NADH-quinone oxidoreductase subunit M n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1XTC7_9ACTN) HSP 1 Score: 284 bits (727), Expect = 1.790e-90 Identity = 142/211 (67.30%), Postives = 173/211 (81.99%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLTGAETGDYTFNMLALSENAGDG-IVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 K A+ VSL+ L +G+ LL+DFDYD AG Q+ D EWIE+I + Y++G+DGMSLPL+ LT+L+ PLV IYSWNH P+P N KAFLML+L+L TGMIGTFVA+DL+LFFVFFEVVLLPMFFMIAVWGGED++YASLKFFLYTLFGSALML+SFLALFFL G ET F++ LS+ +G + + QL+IFGGM +GFG+KVPM PFHTW Sbjct: 35 KMIALAVSLVVLAIGVALLIDFDYDNAGTMQWTADYEWIEIIKSDYSIGIDGMSLPLLLLTMLITPLVIIYSWNHFPAPHNPKAFLMLILVLHTGMIGTFVARDLVLFFVFFEVVLLPMFFMIAVWGGEDKKYASLKFFLYTLFGSALMLVSFLALFFLAGGET----FSITGLSDAVAEGGVSTNAQLWIFGGMLLGFGIKVPMFPFHTW 241
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A2E4XLG8_9ACTN (NADH-quinone oxidoreductase chain 13 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4XLG8_9ACTN) HSP 1 Score: 283 bits (724), Expect = 4.180e-90 Identity = 147/213 (69.01%), Postives = 174/213 (81.69%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLT-GAETGD--YTFNMLALSENAGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 K A+ +L+T GLGIF+L DFDY ++G QY VD EWI VI + Y +G+DGMSLPLIALT+ ++PL IY++ H P P N KA L L+LILETGMIGTF +QDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYT+FGSALML+SFLAL+FL G+ GD +TF++++LSE A GI RS QL+IF GMF+GFGVKVPM PFHTW Sbjct: 24 KAVALATTLVTAGLGIFMLFDFDYGKSGDLQYVVDEEWINVINSRYILGIDGMSLPLIALTLFIVPLCLIYTFGHFPEPRNPKAILALILILETGMIGTFASQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTMFGSALMLVSFLALYFLADGSIVGDQMHTFSIVSLSEGATLGISRSAQLWIFAGMFVGFGVKVPMFPFHTW 236
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A354B7W1_9ACTN (NADH-quinone oxidoreductase chain 13 (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B7W1_9ACTN) HSP 1 Score: 270 bits (691), Expect = 1.660e-89 Identity = 142/174 (81.61%), Postives = 157/174 (90.23%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLT-GAETGDY--TFNM 513 K+WA+ VSL+ LGLGI +L DF+YDQAG Q+ VD WI+VIGAGYT+GVDGMSLPLIALTVLVMPLVF+YSWNHIPSPGNTK+FL+LMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGG+DRRYASLKFFLYTLFGSALMLL FLALFFL TG++ TF+M Sbjct: 31 KRWALTVSLVALGLGIAMLFDFNYDQAGQLQWVVDEPWIDVIGAGYTLGVDGMSLPLIALTVLVMPLVFLYSWNHIPSPGNTKSFLILMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGDDRRYASLKFFLYTLFGSALMLLGFLALFFLAKDPVTGEFLRTFDM 204
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A382RYK4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382RYK4_9ZZZZ) HSP 1 Score: 273 bits (698), Expect = 2.950e-89 Identity = 143/211 (67.77%), Postives = 169/211 (80.09%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLTGAETGDYTFNMLALSEN-AGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 K A++ SL +G+ LL FD Q+ VD WI+VI + Y++G+DGMSLPLI LT+LV+PL +YSWNH P P N KAFL+L+LILETGMIGTFVAQDL+LFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALML+SFLALFFLTGAET F++ L++ A G+ R+ QL+IFGGMF+GFG+KVPM PFHTW Sbjct: 36 KLIALVTSLWVAFVGVLLLFQFDLGHTDRLQFGVDKVWIDVISSRYSVGIDGMSLPLILLTMLVVPLCIVYSWNHFPDPFNPKAFLILILILETGMIGTFVAQDLVLFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLVSFLALFFLTGAET----FSITGLADAVAAGGVSRTAQLWIFGGMFLGFGIKVPMFPFHTW 242
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Match: A0A2E5ZJA1_9ACTN (NADH-quinone oxidoreductase chain 13 n=8 Tax=root TaxID=1 RepID=A0A2E5ZJA1_9ACTN) HSP 1 Score: 279 bits (713), Expect = 3.060e-88 Identity = 144/210 (68.57%), Postives = 170/210 (80.95%), Query Frame = 1 Query: 1 KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVDGMSLPLIALTVLVMPLVFIYSWNHIPSPGNTKAFLMLMLILETGMIGTFVAQDLILFFVFFEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLLSFLALFFLTGAETGDYTFNMLALSENAGDGIVRSTQLFIFGGMFIGFGVKVPMVPFHTW 630 K A++ SL +G+ LL+ FD D QY VD WI++I + Y +G+DGMSLPLI LT+LV+PL +YSWNH P P N KAFL+L+L+LETGMIGTFVAQDL+LFFVFFEVVLLPMFFMIAVWGG+DRRYASLKFFLYTLFGSALML+SFLALFFLTGA+T +TF LA AG G+ R+ QL+IFGGMF+GFG+KVPM PFHTW Sbjct: 36 KLIALVTSLWVAFVGVLLLIWFDLDHTDKLQYVVDKVWIDIISSRYAVGIDGMSLPLILLTMLVVPLCIVYSWNHFPEPVNPKAFLILILVLETGMIGTFVAQDLVLFFVFFEVVLLPMFFMIAVWGGDDRRYASLKFFLYTLFGSALMLVSFLALFFLTGADT--FTFTGLA-DAVAGGGVSRNAQLWIFGGMFLGFGIKVPMFPFHTW 242 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105228.1120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105228.1120.1 >prot_M-pyrifera_M_contig105228.1120.1 ID=prot_M-pyrifera_M_contig105228.1120.1|Name=mRNA_M-pyrifera_M_contig105228.1120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp KQWAILVSLITLGLGIFLLVDFDYDQAGAFQYFVDTEWIEVIGAGYTMGVback to top mRNA from alignment at M-pyrifera_M_contig105228:2..631- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105228.1120.1 ID=mRNA_M-pyrifera_M_contig105228.1120.1|Name=mRNA_M-pyrifera_M_contig105228.1120.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig105228:2..631- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105228:2..631- >mRNA_M-pyrifera_M_contig105228.1120.1 ID=mRNA_M-pyrifera_M_contig105228.1120.1|Name=mRNA_M-pyrifera_M_contig105228.1120.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig105228:2..631- (Macrocystis pyrifera P11B4 male)back to top |