mRNA_M-pyrifera_M_contig104581.989.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: A0A812X8W8_9DINO (Proteasome subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X8W8_9DINO) HSP 1 Score: 107 bits (268), Expect = 7.460e-27 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 73 PMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 P+KHTT+PIVTG+SV+AIKY GVMMAADTL SYGGLARF D+RRL+ GKS LIG SG+ SDFQ+I+ LLD Sbjct: 20 PVKHTTQPIVTGTSVIAIKYKDGVMMAADTLGSYGGLARFTDLRRLKVVGKSTLIGCSGEYSDFQYILSLLD 91
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: A0A7S3HPE8_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPE8_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.690e-25 Identity = 49/81 (60.49%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 46 VHGAAAYDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 +H A + P HTT+PIVTG++V+ IKY GGVM+AADTLASYG LAR+KD+RRL+ G++ LIG SG++SDFQ I+++LD Sbjct: 10 MHAALSPHAPTTHTTQPIVTGTTVIGIKYNGGVMLAADTLASYGSLARYKDVRRLKQVGENTLIGASGEISDFQTIMEMLD 90
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: A0A316YJN5_9BASI (Proteasome subunit beta n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YJN5_9BASI) HSP 1 Score: 102 bits (254), Expect = 1.210e-24 Identity = 49/88 (55.68%), Postives = 67/88 (76.14%), Query Frame = 1 Query: 28 VALAPQVHGAAAYDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGF-GKSALIGGSGDMSDFQHIVDLLD 288 ++ P H + A+DD KHT +PIVTG+S+L I++ GGVM+A+DTLASYG LARF D+RRL G ++++G SGDMSDFQHI L++ Sbjct: 17 ISAGPSSHSSDAFDDARKHTQQPIVTGTSILGIRFKGGVMLASDTLASYGSLARFMDVRRLISVEGANSIVGASGDMSDFQHIQHLIE 104
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: U5H299_USTV1 (Proteasome subunit beta n=4 Tax=Microbotryum TaxID=34416 RepID=U5H299_USTV1) HSP 1 Score: 102 bits (253), Expect = 2.190e-24 Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 1 Query: 61 AYDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 A+ ++HT +PIVTG+SVLAIK+ GGVMMAAD LASYG LARFKD++RL G+S LIG SGDM+D+Q ++ LL+ Sbjct: 37 AFSQGVQHTQQPIVTGTSVLAIKFNGGVMMAADNLASYGSLARFKDIKRLHAVGESTLIGASGDMADYQQVIKLLE 112
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: A0A0C9WVE4_9AGAR (Proteasome subunit beta n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9WVE4_9AGAR) HSP 1 Score: 100 bits (250), Expect = 5.130e-24 Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 28 VALAPQVHGAAAYDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 +A PQ + A+ ++HT +PIVTG+SVLAIKY G+MMAAD LASYG LARFKD++RL G + +IG GDMSDFQ+I ++LD Sbjct: 24 IAQRPQNNPKDAFSAGVQHTQQPIVTGTSVLAIKYKDGIMMAADNLASYGSLARFKDIQRLHAVGNNTMIGAGGDMSDFQYIQNMLD 110
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: D8LRR1_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR1_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 1.090e-23 Identity = 48/80 (60.00%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 49 HGAAAYDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 H AA D +HT++PIVTG+SVL IKY GVM+AADTLASYG LAR+K++ RL+ G+ LIG SG+ SDFQHI++ L+ Sbjct: 15 HATAAMDGTRQHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYSDFQHIMETLE 94
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: M5FSI8_DACPD (Proteasome subunit beta n=2 Tax=Dacrymycetaceae TaxID=5254 RepID=M5FSI8_DACPD) HSP 1 Score: 99.8 bits (247), Expect = 1.450e-23 Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 61 AYDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 A+ D ++HT +PIVTG+SVLAIKY G+MMAAD LASYG LARFKD+ RL G+ LIG GDMSDFQ++ LLD Sbjct: 36 AFTDGVQHTQQPIVTGTSVLAIKYKDGIMMAADCLASYGSLARFKDISRLHSVGQYTLIGAGGDMSDFQYLQHLLD 111
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: A0A401GVE0_9APHY (Proteasome subunit beta n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GVE0_9APHY) HSP 1 Score: 99.8 bits (247), Expect = 1.450e-23 Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 1 Query: 61 AYDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 A+ + ++HT +PIVTG+SVLAIKY GVMMAAD LASYG LARFKD++RL G S +IG SGD+SDFQ++ +LLD Sbjct: 34 AFAEGVQHTQQPIVTGTSVLAIKYKDGVMMAADNLASYGSLARFKDIQRLHPVGSSTIIGVSGDLSDFQYLQNLLD 109
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: A0A0D7BD90_9AGAR (Proteasome subunit beta n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7BD90_9AGAR) HSP 1 Score: 99.4 bits (246), Expect = 1.970e-23 Identity = 47/75 (62.67%), Postives = 61/75 (81.33%), Query Frame = 1 Query: 64 YDDPMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLLD 288 ++D ++HT +PIVTG+SVLAIKYA GVM+AAD LASYG LARFKD++R+ G S ++G SGDMSDFQ++ LD Sbjct: 34 FEDSVQHTQQPIVTGASVLAIKYANGVMLAADNLASYGSLARFKDVKRVIQVGSSTIVGASGDMSDFQYLQRELD 108
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Match: A0A482UNQ1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UNQ1_9ARCH) HSP 1 Score: 96.7 bits (239), Expect = 2.280e-23 Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 1 Query: 73 PMKHTTRPIVTGSSVLAIKYAGGVMMAADTLASYGGLARFKDMRRLRGFGKSALIGGSGDMSDFQHIVDLL 285 P HTT PIVTG++VLAIKY GVMMAADTLASYG LAR+KD+RR++ G+ LIG SG+MSDFQ + ++L Sbjct: 40 PNTHTTSPIVTGTTVLAIKYNEGVMMAADTLASYGSLARYKDVRRIQKVGEHCLIGASGEMSDFQSLQEML 110 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104581.989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104581.989.1 >prot_M-pyrifera_M_contig104581.989.1 ID=prot_M-pyrifera_M_contig104581.989.1|Name=mRNA_M-pyrifera_M_contig104581.989.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=96bp MSSAEVDSGVALAPQVHGAAAYDDPMKHTTRPIVTGSSVLAIKYAGGVMMback to top mRNA from alignment at M-pyrifera_M_contig104581:195..482+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104581.989.1 ID=mRNA_M-pyrifera_M_contig104581.989.1|Name=mRNA_M-pyrifera_M_contig104581.989.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=288bp|location=Sequence derived from alignment at M-pyrifera_M_contig104581:195..482+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104581:195..482+ >mRNA_M-pyrifera_M_contig104581.989.1 ID=mRNA_M-pyrifera_M_contig104581.989.1|Name=mRNA_M-pyrifera_M_contig104581.989.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=576bp|location=Sequence derived from alignment at M-pyrifera_M_contig104581:195..482+ (Macrocystis pyrifera P11B4 male)back to top |