mRNA_M-pyrifera_M_contig104564.982.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104564.982.1 vs. uniprot
Match: A0A7S4Q7P3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q7P3_9DINO) HSP 1 Score: 192 bits (489), Expect = 7.870e-56 Identity = 98/171 (57.31%), Postives = 119/171 (69.59%), Query Frame = 1 Query: 19 VLDVGLGKTLLTACYVRHFLDQTPLDIRAVLWVTPSDLVQPTLEQLQRRWRLPACLLAASAVPKKGHINLVAHDHLRKKFTQKQQRLQGGAASVVDELASWAPFMVVVLDEVDTMYANTQRTSAAHRISALAAKLVCQTATPLRNSRHEQLAAWLAKTENYPVDKRNWLVA 531 V+D G GKTL Y+R FLD + +D+R VLWVTP++LV+PTLEQL+RRW PAC L P + H+N+V HD LRK V ELA+ AP +VV DE DTMYA TQRTSAAHR++AL KLVCQTATPLRN+++EQLA WL +TE +PVD NWLVA Sbjct: 285 VMDTGYGKTLTALSYLRRFLDASAVDVRCVLWVTPTELVRPTLEQLRRRWGAPACELPEDGRPLEAHVNVVKHDRLRK---------------VGRELAAAAPRTLVVFDEADTMYAATQRTSAAHRVAALCPKLVCQTATPLRNTKNEQLAEWLQRTERFPVDGGNWLVA 440
BLAST of mRNA_M-pyrifera_M_contig104564.982.1 vs. uniprot
Match: A0A7S1ZT48_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZT48_TRICV) HSP 1 Score: 90.9 bits (224), Expect = 2.910e-18 Identity = 66/188 (35.11%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 19 VLDVGLGKTLLTACYVRHFLDQTPLDIRAV---LWVTPSD---------LVQPTLEQLQRRWRLPACLLA-----ASAVPKKGHINLVAHDHLRKKFTQKQQRLQGGAASVVDELASWAPFMVVVLDEVDTMYANTQRTSAAHRISALAAKLVCQTATPLRNSRHEQLAAWLAKTENYPVDKRNWLVA 531 V++ G+GKTL + H L P + V +WVTP L++ +QL RRW P ++ A A ++G +N+VAHDHLRK ++ +L P VVV DEVD +Y T+RTSAA +++ + V TATP+ + ++LA WL ++YPV RN+LVA Sbjct: 34 VMETGMGKTLTALRFFSHQLAHFPAYVGRVDYFVWVTPPGKKLGNNEFTLIKSLGKQL-RRWGAPYVTVSPPRGGACASFRRGVVNVVAHDHLRK---------------MLSDLMRIGPRSVVVFDEVDELYNATKRTSAALLLASSCWRFVAMTATPMTKT-VDRLATWLGLAQHYPVMNRNYLVA 204 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104564.982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104564.982.1 >prot_M-pyrifera_M_contig104564.982.1 ID=prot_M-pyrifera_M_contig104564.982.1|Name=mRNA_M-pyrifera_M_contig104564.982.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp MLTGTQVLDVGLGKTLLTACYVRHFLDQTPLDIRAVLWVTPSDLVQPTLEback to top mRNA from alignment at M-pyrifera_M_contig104564:1..531- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104564.982.1 ID=mRNA_M-pyrifera_M_contig104564.982.1|Name=mRNA_M-pyrifera_M_contig104564.982.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig104564:1..531- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104564:1..531- >mRNA_M-pyrifera_M_contig104564.982.1 ID=mRNA_M-pyrifera_M_contig104564.982.1|Name=mRNA_M-pyrifera_M_contig104564.982.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig104564:1..531- (Macrocystis pyrifera P11B4 male)back to top |