mRNA_M-pyrifera_M_contig10444.949.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10444.949.1
Unique NamemRNA_M-pyrifera_M_contig10444.949.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: D7FRQ9_ECTSI (Dynein light intermediate chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ9_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 2.530e-112
Identity = 205/319 (64.26%), Postives = 221/319 (69.28%), Query Frame = 1 
Query:    1 KWTAVVEKHVAGLLKQLSVGAQDDLRGAVKDRWMAARAGVDGKGANDASNSXXXXXXXXGSNRFRGGSKDPPGGGLGDGVLEKNIGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAPSEASRQGGXXXXXXXXXXXVAPGEEEV----------------EAVESEEAWLSNLGKQVAGADGASRWPSALAAASKVAKSSKARSPRTSAANVPDPRSFFANLLAGGSSSISSP 909
            KWT  +EKHV  LL QLSVGAQDDLR AVK+R       + G         XXXXXXX                GLGDGVLE+N+GVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKD VNC LLHRYLLSC+YP AF  SEEGQTSDAAFIPAGWDS+RLIDGLLSPDKTPWGP +TFAEVVV P  A  +G             + G                    E VESEEAWLS+LGKQVAG D  SRWPSA+AAA+K AK+SK  SPR + AN PDPRSFFANLLA GS + S P
Sbjct:  208 KWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXX----------------GLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDSVNCSLLHRYLLSCVYPDAFSFSEEGQTSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGAVGRGASGSGMGGWMDGDSGGXXXXXXXXXXXXXXXXXXXXETVESEEAWLSSLGKQVAGTDSKSRWPSAIAAAAKHAKASK--SPRKAPANAPDPRSFFANLLATGSGAGSPP 508
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A0A7S2V3Z7_9STRA (Dynein light intermediate chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z7_9STRA)

HSP 1 Score: 135 bits (341), Expect = 6.950e-35
Identity = 74/164 (45.12%), Postives = 98/164 (59.76%), Query Frame = 1 
Query:  241 LEKNIGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTS-DAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAPSEASRQGGXXXXXXXXXXXVAPGEEEVEAVESEEAWLSNL 729
            L  N+GVP++V+GCKAD L+SETFEQQQRL FIQQ LR  CL YGA L+Y S+  G N  LLHRYLL  LYP  F   +E + + D+ FIP+GWDS  LI+ L    K+PW   +T+ +V+  P++                    GE+E + +  +E WL  L
Sbjct:   47 LTNNLGVPILVIGCKADKLESETFEQQQRLQFIQQHLRNCCLPYGAGLLYCSSHGGTNMNLLHRYLLHRLYPDMFSLKDEAKVANDSVFIPSGWDSPSLIEDLKQA-KSPWEADATYDQVIRIPTDVLEA-----EVKQARAKTTDGEKEEDRLPPDEDWLETL 204
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A0A7S3XSQ8_HETAK (Dynein light intermediate chain (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ8_HETAK)

HSP 1 Score: 132 bits (333), Expect = 8.410e-33
Identity = 76/212 (35.85%), Postives = 115/212 (54.25%), Query Frame = 1 
Query:    1 KWTAVVEKHVAGLLKQLSVGAQDDLRGAVKDRWMAARAGVDGKGANDASNSXXXXXXXXGSNRFRGGSKDPPGGGLGDGVLEKNIGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQ------TSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAPSEA 618
            KW  V+E+ +  +  QLSVG QD+L   +++ ++A++  V+                          SK           +++N+GVP++V+GCK D++++ETFE QQ+L FIQQ LR+FC +YGAAL + SA+ G N G L  YLL   +PG FP             +D  FIP+GWD+ +LI+ L    KT W P + F  V+  P+E+
Sbjct:  151 KWVKVLERAIVKVRSQLSVGDQDELM-QIQNDYIASQTEVENS------------------------SK-----------IQRNLGVPLMVIGCKLDAIEAETFEHQQKLQFIQQHLRKFCYQYGAALCFASARAGTNLGRLRGYLLHRAHPGHFPGGXXXXXXXAQVANDELFIPSGWDTMKLIEDL-EQAKTSWAPDAAFETVITPPAES 325
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: W7U234_9STRA (Dynein light intermediate chain n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U234_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.130e-28
Identity = 68/130 (52.31%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:  235 GVLEKNIGVPMVVVGCKADSLQ-SETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDA-AFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAPSEA 618
            GVLE+N+GVP+VVVG KAD     ++++   R  F QQ LRR CLKYGA+LVYTSA +G NC LL RYLL  LYP  F      Q   A  F+P+GWD+  L+  LLSP   PW P+ TF+E+ V P  A
Sbjct:  341 GVLEENLGVPLVVVGLKADLAPVPDSYDDGLRSLFFQQYLRRVCLKYGASLVYTSASNGDNCLLLQRYLLHRLYPEHFSFLLPVQAPRALTFVPSGWDTPELVQKLLSPQAVPWPPSLTFSEIFVPPKGA 470
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A0A2C9JP05_BIOGL (Dynein light intermediate chain n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JP05_BIOGL)

HSP 1 Score: 106 bits (265), Expect = 2.890e-22
Identity = 56/132 (42.42%), Postives = 82/132 (62.12%), Query Frame = 1 
Query:  226 LGDGVLEKNIGVPMVVVGCKADS---LQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAPS 612
            LG+  L KN+G+P+VVV  K+D+   L+ +   + + L FIQQ +R+FCLKYGAA+ YTS KD  NC LL+RYL+  +Y   F S       D+ F+P+GWD+ + I  +L  + T   P  TF +++  PS
Sbjct:  211 LGELTLSKNLGIPIVVVVTKSDTISMLEKDFDYKDEHLDFIQQHIRKFCLKYGAAMFYTSVKDERNCDLLYRYLVHRIYGFPFTSPALVVDKDSVFVPSGWDNEKKIS-ILYDNMTSMKPDDTFEDIITKPS 341
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A0A3Q0ITE3_DIACI (Dynein light intermediate chain n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0ITE3_DIACI)

HSP 1 Score: 103 bits (258), Expect = 5.910e-22
Identity = 70/207 (33.82%), Postives = 108/207 (52.17%), Query Frame = 1 
Query:    4 WTAVVEKHVAGLLKQLSVGAQD--DLRGAVKDRWMAARAGVDGKGANDASNSXXXXXXXXGSNRFRGGSKDPPGGGLGDGVLEKNIGVPMVVVGCKAD---SLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAP 609
            W +V++ H+      L++GA D  +L      RW      VD     D  NS         + R     ++  G  LG+G+LE+N+GV +VVV  K D   +L+ + + +++   F+QQ +R+FCLK+GA L YTSAK+  NC LL++YL   LY   F +S      DA  IP+GWD+ + I G+L  +     P   + +V+  P
Sbjct:   21 WASVLQDHI----DSLNIGAHDYQELTQRSIKRWYEY---VDQGDDLDGDNSLP-------NRRISRNYEEEQGLPLGEGILERNLGVDIVVVVTKTDYMSTLEKDFYYKEEHFDFVQQYIRKFCLKFGAGLFYTSAKEDKNCDLLYKYLAHRLYGFPFRTSALIVEKDAVLIPSGWDNMKKI-GILYENMQSIKPDDYYTDVITKP 212
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A0A8B7XST6_ACAPL (Dynein light intermediate chain n=3 Tax=Valvatida TaxID=41166 RepID=A0A8B7XST6_ACAPL)

HSP 1 Score: 104 bits (259), Expect = 1.650e-21
Identity = 58/132 (43.94%), Postives = 79/132 (59.85%), Query Frame = 1 
Query:  226 LGDGVLEKNIGVPMVVVGCKAD---SLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAPS 612
            LG+  L  N+G+PMVVV  K+D   SL+ E   + + L FIQQ +R+FCL YGAAL YTS K+G NC LL++YLL  +Y   F         DA F+P+GWD+ + I G+L  +     P   F EV+  P+
Sbjct:  206 LGETTLTHNLGIPMVVVVTKSDAISSLEKEHDFKMEHLDFIQQHIRKFCLNYGAALFYTSVKEGKNCDLLYKYLLHRIYSFPFHKPALVVEKDALFVPSGWDNLQKI-GILYENMPNINPEEPFGEVIEKPA 336
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A3F4W1_TAEAS (Dynein light intermediate chain (Fragment) n=1 Tax=Taenia asiatica TaxID=60517 RepID=A3F4W1_TAEAS)

HSP 1 Score: 101 bits (251), Expect = 1.910e-21
Identity = 58/130 (44.62%), Postives = 74/130 (56.92%), Query Frame = 1 
Query:  235 GVLEKNIGVPMVVVGCKADSLQSETFEQ---QQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAPSE 615
            G L  N+G+P+VVV  K D +     +Q   +++   IQ  +RRFCL YGAALVY SAK+G NCGLL  YL   +Y   F  +      D+ FIPAGWDS   I GLL  + T + P   F +VV  P E
Sbjct:   20 GALINNLGIPLVVVVTKTDVMDDMERKQGMSEEQYDLIQMHIRRFCLSYGAALVYVSAKNGKNCGLLKNYLQHRIYGSPFTQNAYVIDKDSVFIPAGWDSLNKI-GLLEQNLTKYRPGDDFDKVVPKPQE 148
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A0A0B7A318_9EUPU (Dynein light intermediate chain (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7A318_9EUPU)

HSP 1 Score: 99.8 bits (247), Expect = 7.230e-21
Identity = 53/131 (40.46%), Postives = 78/131 (59.54%), Query Frame = 1 
Query:  226 LGDGVLEKNIGVPMVVVGCKADS---LQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAP 609
            LG+  L +N+G+P+VVV  K+D    L+ E   + + L FIQ+++R+FCLKYGAA+ YTS KD  NC LL+RYL+  +Y   F S       D+ F+P+GWD+ + I  +L  +     P   F  V+  P
Sbjct:    6 LGELTLSRNLGIPIVVVVTKSDEISMLEKELDFKDEHLDFIQENIRKFCLKYGAAMFYTSVKDERNCDLLYRYLVHRIYGFPFTSPALVVDKDSVFVPSGWDNEKKIS-ILYENMVTMKPDDPFESVITRP 135
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BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Match: A0A8D9DQ38_9HEMI (Dynein light intermediate chain n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9DQ38_9HEMI)

HSP 1 Score: 102 bits (255), Expect = 8.060e-21
Identity = 69/208 (33.17%), Postives = 108/208 (51.92%), Query Frame = 1 
Query:    1 KWTAVVEKHVAGLLKQLSVGAQD--DLRGAVKDRWMAARAGVDGKGANDASNSXXXXXXXXGSNRFRGGSKDPPGGGLGDGVLEKNIGVPMVVVGCKAD---SLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCLYPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVVVAP 609
            KW + ++ H+      L++GA D  +L      RW      VD     D  NS         + R     ++  G  LG+G+LE+N+GV +VVV  K D   +L+ + + +++   F+QQ +R+FCLK+GA L YTSAK+  NC LL++YL   LY   F +S      DA  IP+GWD+ + + G+L  +     P   + +V+  P
Sbjct:  145 KWASALQDHI----DNLNIGAHDYQELTQRNIKRWYEY---VDQGDDLDGDNSLP-------NRRISRNYEEEQGLPLGEGILERNLGVDIVVVVTKTDYMSTLEKDLYYKEEHFDFVQQYIRKFCLKFGAGLFYTSAKEDKNCDLLYKYLAHRLYGIPFRTSALIVEKDAVLIPSGWDNMKKV-GILYENMQSIKPDDYYTDVISKP 337
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10444.949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ9_ECTSI2.530e-11264.26Dynein light intermediate chain n=2 Tax=Ectocarpus... [more]
A0A7S2V3Z7_9STRA6.950e-3545.12Dynein light intermediate chain n=1 Tax=Fibrocapsa... [more]
A0A7S3XSQ8_HETAK8.410e-3335.85Dynein light intermediate chain (Fragment) n=1 Tax... [more]
W7U234_9STRA4.130e-2852.31Dynein light intermediate chain n=2 Tax=Monodopsid... [more]
A0A2C9JP05_BIOGL2.890e-2242.42Dynein light intermediate chain n=2 Tax=Biomphalar... [more]
A0A3Q0ITE3_DIACI5.910e-2233.82Dynein light intermediate chain n=1 Tax=Diaphorina... [more]
A0A8B7XST6_ACAPL1.650e-2143.94Dynein light intermediate chain n=3 Tax=Valvatida ... [more]
A3F4W1_TAEAS1.910e-2144.62Dynein light intermediate chain (Fragment) n=1 Tax... [more]
A0A0B7A318_9EUPU7.230e-2140.46Dynein light intermediate chain (Fragment) n=1 Tax... [more]
A0A8D9DQ38_9HEMI8.060e-2133.17Dynein light intermediate chain n=2 Tax=Cacopsylla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10444contigM-pyrifera_M_contig10444:499..3830 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.6
Seed ortholog evalue3e-93
Seed eggNOG ortholog2880.D7FRQ9
Preferred nameDYNC1LI1
KEGG koko:K03685,ko:K10416
KEGG Pathwayko03008,ko04145,ko04962,ko05132,ko05205,map03008,map04145,map04962,map05132,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000226,GO:0000278,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0000922,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003006,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005868,GO:0005874,GO:0005875,GO:0005886,GO:0006403,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0007409,GO:0008088,GO:0008090,GO:0008150,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0010564,GO:0010769,GO:0010965,GO:0010970,GO:0010975,GO:0012505,GO:0012506,GO:0015630,GO:0015931,GO:0016020,GO:0016043,GO:0016192,GO:0016358,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019882,GO:0019884,GO:0019886,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030030,GO:0030071,GO:0030141,GO:0030154,GO:0030182,GO:0030286,GO:0030659,GO:0030667,GO:0030705,GO:0031090,GO:0031175,GO:0031344,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032886,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0035371,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045321,GO:0045504,GO:0045595,GO:0045664,GO:0045787,GO:0045931,GO:0046605,GO:0046903,GO:0046907,GO:0048002,GO:0048193,GO:0048468,GO:0048477,GO:0048518,GO:0048522,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050773,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051259,GO:0051260,GO:0051493,GO:0051640,GO:0051641,GO:0051642,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051983,GO:0060284,GO:0061564,GO:0061842,GO:0065003,GO:0065007,GO:0070507,GO:0070820,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090068,GO:0090231,GO:0090232,GO:0090266,GO:0090267,GO:0097159,GO:0097367,GO:0097458,GO:0097708,GO:0098588,GO:0098687,GO:0098805,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0101003,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:1901265,GO:1901363,GO:1901976,GO:1901978,GO:1901987,GO:1901990,GO:1902099,GO:1902494,GO:1902850,GO:1903047,GO:1903504,GO:1905818,GO:1990089,GO:1990090,GO:1990752,GO:2000026
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG3905@1,KOG3905@2759
Ec32 ortholog descriptionD1LIC, cytoplasmic dynein 1 light intermediate chain
Ec32 orthologEc-00_003490.1
EC3.1.26.3
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03019,ko03036,ko04131,ko04812
Exons4
Model size909
Cds size909
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10444.949.1prot_M-pyrifera_M_contig10444.949.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10444 499..3830 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.2274907-CDS-M-pyrifera_M_contig10444:498..8681622815551.2274907-CDS-M-pyrifera_M_contig10444:498..868Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 499..868 +
1692277459.873832-CDS-M-pyrifera_M_contig10444:498..8681692277459.873832-CDS-M-pyrifera_M_contig10444:498..868Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 499..868 +
1622815551.2383637-CDS-M-pyrifera_M_contig10444:1780..18961622815551.2383637-CDS-M-pyrifera_M_contig10444:1780..1896Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 1781..1896 +
1692277459.890983-CDS-M-pyrifera_M_contig10444:1780..18961692277459.890983-CDS-M-pyrifera_M_contig10444:1780..1896Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 1781..1896 +
1622815551.2537649-CDS-M-pyrifera_M_contig10444:2717..30501622815551.2537649-CDS-M-pyrifera_M_contig10444:2717..3050Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 2718..3050 +
1692277459.8994694-CDS-M-pyrifera_M_contig10444:2717..30501692277459.8994694-CDS-M-pyrifera_M_contig10444:2717..3050Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 2718..3050 +
1622815551.2677333-CDS-M-pyrifera_M_contig10444:3740..38301622815551.2677333-CDS-M-pyrifera_M_contig10444:3740..3830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 3741..3830 +
1692277459.9081285-CDS-M-pyrifera_M_contig10444:3740..38301692277459.9081285-CDS-M-pyrifera_M_contig10444:3740..3830Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10444 3741..3830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10444.949.1

>prot_M-pyrifera_M_contig10444.949.1 ID=prot_M-pyrifera_M_contig10444.949.1|Name=mRNA_M-pyrifera_M_contig10444.949.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=303bp
KWTAVVEKHVAGLLKQLSVGAQDDLRGAVKDRWMAARAGVDGKGANDASN
SNNTNTNNNGSNRFRGGSKDPPGGGLGDGVLEKNIGVPMVVVGCKADSLQ
SETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCL
YPGAFPSSEEGQTSDAAFIPAGWDSRRLIDGLLSPDKTPWGPTSTFAEVV
VAPSEASRQGGGGGRGRGTGSGVAPGEEEVEAVESEEAWLSNLGKQVAGA
DGASRWPSALAAASKVAKSSKARSPRTSAANVPDPRSFFANLLAGGSSSI
SSP
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mRNA from alignment at M-pyrifera_M_contig10444:499..3830+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10444.949.1 ID=mRNA_M-pyrifera_M_contig10444.949.1|Name=mRNA_M-pyrifera_M_contig10444.949.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3332bp|location=Sequence derived from alignment at M-pyrifera_M_contig10444:499..3830+ (Macrocystis pyrifera P11B4 male)
AAGTGGACTGCAGTAGTGGAGAAGCACGTGGCGGGGCTGCTCAAACAGCT
GTCCGTGGGGGCCCAGGATGACCTGCGCGGCGCTGTCAAGGACAGATGGA
TGGCAGCTCGCGCAGGCGTGGACGGGAAGGGGGCGAACGATGCCAGCAAC
AGCAACAACACCAACACCAACAACAACGGGAGCAACAGGTTCAGGGGAGG
GAGCAAGGACCCTCCCGGCGGGGGGCTGGGGGATGGCGTTCTAGAGAAGA
ATATTGGCGTTCCGATGGTGGTCGTCGGGTGCAAGGCGGACTCGTTGCAG
AGCGAGACGTTCGAGCAGCAGCAGCGGCTGCACTTCATTCAGCAGAGTCT
CCGGCGGTTTTGTCTCAAATGTGAGTAGGCGACTGAGAACGGGCTGGGAG
CGGGAGCGGGGACCGGAGGCGGCAGGCGGCAGGCGGCATGCGGTAGCGAC
GCCATCGTCCGCGTTTTCCGTTCTCTTTCTTCCGCGCCTGTGGCGTAGCG
TCAACCTTCAAGTAGGAAAGGTTTTCCTTCTCGAAAATAACGCCGTTGTT
GTTTTGTTGTTCCTCGATTAAAACGGTTTTGTTCATCGAATACAAGGCGT
TGTCAAACTTGGCCTATGTAGGCCGCCGACGGGAATGCGTGCCGGCGATG
TTGATGCCTGTATTGTTCTACAAGTAGTGCGCTCTTGGGAGACCTCCGCC
CGCTGAGCCCACCGCACGTTAGAATCGGCGTCGGTGATACTTAGCACGTG
CTCGCTCTTGTACGATCCCGGCCGCGCTATCCTTCGTGCGGCCCTCTAGG
CGAGTTGTCGGGTTCTGAACGCGACGAAGCGTGCGAAACACTGCGCCCAC
TCGCTTGGGCGCAAGCGCGCAAAACGCTGCGCTCACTCGCTTGAGCAAGC
ACGCAAAATGTTGCGGCAGGGCCAGTAGAGTAAGCGAGCGAGTAGAGTAA
AGAGGCGAGTCAGCGACTGCGAGAGGAAGCCACACAGCGTGCTGCGAATT
ATCGCATGTGTATGTATGTATTTTAAGATCCTGGTATATTTTTGGTGAGC
TGTGAGGTGCACGCGCTGCTCACGTCGTCGGCCTGGACCGTCGGTATAAT
CGCGTGGCGGAGAGATAGTTCGCTCGCGCTATGAAGCCAGAAGCAGTGGC
GGTTGCTTTTGTCATGCGTCGTTGTTGATTTTTGCGGTTTCTTACGTTGC
TTTGGCGAAACAACTTGGTGGTTGGTTGGTAGTGCTTTCCTGCTCAACGA
CTGCTCCGTGATTCACAACCTGTCCTGTGCAGACGGGGCAGCCCTGGTGT
ACACTTCGGCGAAGGACGGCGTGAACTGCGGCCTTCTCCACCGGTATCTC
CTCAGCTGCCTGTACCCTGGAGCCTTCCCTTCCTCGGAAGAAGGACAGGT
GCGCGCGTGGTCCCGCTCCCGCCCTCTCCCATCGCTAGTACAGTTTCAGG
GGGCTGTGCTTGCCCCCCTCCCCCCGCCAGGCAGCAGTATTGTGAATTGC
AGGGGAACCCGAGACTCTCGCGCGCTGACTGATCCGGCTTGCACTTTAAA
ATTTTCAACACCGAAACAGAAAGGGTTCAGCGAATTGTCAGTTGCTATCT
CCTGGAGTATGCTAGCAGTGGAAATTAGACCCCCCCCCCCCTTTTCGTTG
AAGGGTCGGCGCAGTCCATCCATCCACCCCCCTCCACCGCCTACGTGACT
CATTTTCCGAGCTCACAGGCCGCACAGGTTCCGCCACTCCCTCCTCCCGA
AATCGCCAATCAACCCCCGGTATCTTAGGGATGCGGGGTTCTATGGTCGT
ACGACTATGGCCATGCATGGCATGCGTACATAAGGCACCCACGAGGCAGT
CACATAGTACCCCTATTGCTGTCTCTGGAAGTGGCCACACCGGAAAATAA
GTCAACTCTTGGAAGATGTCGCCCATGTGGAAGTCCGCCTCTCAAGCGGT
TCTTGTTTGGGTGCAGCTCACCCTTCACGCGACTCGTCAAACATCTCACT
GCGCTTCTTGCTTGATGCAAGCAAGCAATATCTGCCTGGTGGGTGAAAAC
CCGACGTGCTCCGTCCCGGCATTGTAGGGATGCGAGGGGCTATGGTCATA
CGACTACGGCCATACATGATATCGAGCACCCCCCCCTTCCCTCCCCCTCC
CGCTTTCTGTACCGGCTTATTCCGAAACGTCATTGTGAAAATCGAAATCG
TGGAACAAAACGAAAACAGACGTCGGACGCCGCCTTCATCCCCGCGGGCT
GGGACTCCCGGCGCTTGATCGACGGCCTCCTCTCGCCCGACAAGACTCCC
TGGGGTCCCACCTCGACCTTCGCCGAGGTAGTCGTAGCGCCCTCGGAAGC
GTCTCGTCAGGGGGGCGGGGGGGGGCGCGGCCGCGGCACGGGCTCCGGGG
TGGCGCCTGGCGAGGAGGAGGTGGAGGCCGTGGAGTCGGAGGAGGCGTGG
CTGTCGAACCTCGGGAAGCAAGTGGCCGGCGCCGACGGGGCTTCGCGTTG
GCCATCCGCGTTGGCAGCTGCGTCCAAGGTTGCGAAGTCGTCCAAGGCTA
GGGTGAGTCGGGGGGCGAGTCGAGCGACGGTTTTATGGTTTGGCTTCTGT
GGGGATATGGAAGGCGGTTTCTTGGTTCGTTCTTTGGGTTTTGTGAGGTG
GTTGTGCTGTGCTAGTGTCTTGGGAATTGTGTGGTTGTGTCGACAACAAC
CTTGGGGTCTATGTGGCTGTGACGTTTGAACATTATATTTCCTCCGGGTC
TCTGCTTGCTGTTGCCAGTAACCTGAGAGTTTAGCTGGTGTGTTTGTGGT
GAGGACAGCAGTTATTCCGGGTTTTTTTGCACTCCCCCCCCCCCCCCCTT
CTTTACGGGGGCAATTAGCTCGTTCGCTGTCTCATTGGGGTTTGGGGGTA
GTGGTGGCGACGGTGGCAACGCTGGCGTGGTCGCAACAAAGAATGCTGCG
TCTTTCTCGCCCTTGGGATTCGTAACGCGACCCGCGACGCAACCTGACAG
CTGATAGATTTAGTATTTTGCCTCCTCTAGAACTGCAAACGTTTACGACG
ACAAAATACTACCAGTTACCAGTAGAATTTTAGAGTCGGGCACTTTTCGC
CGTAGCAAAGGGTTAAGTCCGCCCTTCCTCTGTTTCTCAGCCCTATTCCC
GCCCGACCGTTCCCACTCTTGTCCTTCCTGTGGTGCCCGCGGTGCCACGC
CCTCCATTCACGTGGCCCATGCTGTGCCCTACCATGCCAAAGTCACCCCG
GACAAGCGCGGCCAATGTCCCAGACCCCCGGAGCTTCTTCGCCAATCTTC
TGGCCGGTGGGAGCAGCTCTATATCATCGCCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10444:499..3830+

>mRNA_M-pyrifera_M_contig10444.949.1 ID=mRNA_M-pyrifera_M_contig10444.949.1|Name=mRNA_M-pyrifera_M_contig10444.949.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1818bp|location=Sequence derived from alignment at M-pyrifera_M_contig10444:499..3830+ (Macrocystis pyrifera P11B4 male)
AAGTGGACTGCAGTAGTGGAGAAGCACGTGGCGGGGCTGCTCAAACAGCT
GTCCGTGGGGGCCCAGGATGACCTGCGCGGCGCTGTCAAGGACAGATGGA
TGGCAGCTCGCGCAGGCGTGGACGGGAAGGGGGCGAACGATGCCAGCAAC
AGCAACAACACCAACACCAACAACAACGGGAGCAACAGGTTCAGGGGAGG
GAGCAAGGACCCTCCCGGCGGGGGGCTGGGGGATGGCGTTCTAGAGAAGA
ATATTGGCGTTCCGATGGTGGTCGTCGGGTGCAAGGCGGACTCGTTGCAG
AGCGAGACGTTCGAGCAGCAGCAGCGGCTGCACTTCATTCAGCAGAGTCT
CCGGCGGTTTTGTCTCAAATAAGTGGACTGCAGTAGTGGAGAAGCACGTG
GCGGGGCTGCTCAAACAGCTGTCCGTGGGGGCCCAGGATGACCTGCGCGG
CGCTGTCAAGGACAGATGGATGGCAGCTCGCGCAGGCGTGGACGGGAAGG
GGGCGAACGATGCCAGCAACAGCAACAACACCAACACCAACAACAACGGG
AGCAACAGGTTCAGGGGAGGGAGCAAGGACCCTCCCGGCGGGGGGCTGGG
GGATGGCGTTCTAGAGAAGAATATTGGCGTTCCGATGGTGGTCGTCGGGT
GCAAGGCGGACTCGTTGCAGAGCGAGACGTTCGAGCAGCAGCAGCGGCTG
CACTTCATTCAGCAGAGTCTCCGGCGGTTTTGTCTCAAATACGGGGCAGC
CCTGGTGTACACTTCGGCGAAGGACGGCGTGAACTGCGGCCTTCTCCACC
GGTATCTCCTCAGCTGCCTGTACCCTGGAGCCTTCCCTTCCTCGGAAGAA
GGACAGACGGGGCAGCCCTGGTGTACACTTCGGCGAAGGACGGCGTGAAC
TGCGGCCTTCTCCACCGGTATCTCCTCAGCTGCCTGTACCCTGGAGCCTT
CCCTTCCTCGGAAGAAGGACAGACGTCGGACGCCGCCTTCATCCCCGCGG
GCTGGGACTCCCGGCGCTTGATCGACGGCCTCCTCTCGCCCGACAAGACT
CCCTGGGGTCCCACCTCGACCTTCGCCGAGGTAGTCGTAGCGCCCTCGGA
AGCGTCTCGTCAGGGGGGCGGGGGGGGGCGCGGCCGCGGCACGGGCTCCG
GGGTGGCGCCTGGCGAGGAGGAGGTGGAGGCCGTGGAGTCGGAGGAGGCG
TGGCTGTCGAACCTCGGGAAGCAAGTGGCCGGCGCCGACGGGGCTTCGCG
TTGGCCATCCGCGTTGGCAGCTGCGTCCAAGGTTGCGAAGTCGTCCAAGG
CTAGGACGTCGGACGCCGCCTTCATCCCCGCGGGCTGGGACTCCCGGCGC
TTGATCGACGGCCTCCTCTCGCCCGACAAGACTCCCTGGGGTCCCACCTC
GACCTTCGCCGAGGTAGTCGTAGCGCCCTCGGAAGCGTCTCGTCAGGGGG
GCGGGGGGGGGCGCGGCCGCGGCACGGGCTCCGGGGTGGCGCCTGGCGAG
GAGGAGGTGGAGGCCGTGGAGTCGGAGGAGGCGTGGCTGTCGAACCTCGG
GAAGCAAGTGGCCGGCGCCGACGGGGCTTCGCGTTGGCCATCCGCGTTGG
CAGCTGCGTCCAAGGTTGCGAAGTCGTCCAAGGCTAGGTCACCCCGGACA
AGCGCGGCCAATGTCCCAGACCCCCGGAGCTTCTTCGCCAATCTTCTGGC
CGGTGGGAGCAGCTCTATATCATCGCCATCACCCCGGACAAGCGCGGCCA
ATGTCCCAGACCCCCGGAGCTTCTTCGCCAATCTTCTGGCCGGTGGGAGC
AGCTCTATATCATCGCCA
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