mRNA_M-pyrifera_M_contig10437.937.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10437.937.1
Unique NamemRNA_M-pyrifera_M_contig10437.937.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: D8LJQ4_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ4_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 2.100e-61
Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVNGES 390
            CF DNPG+LMYGMMCV+YTTG WL+LASYL LPVSTTH+TIG+++GM V YGG  CVVW    D+FPYV+G+  I  SWV+SP+FSGIVS ++FLTVR  +LRSP AF RSFWV+PILVM  I V+GE+
Sbjct:   31 CFLDNPGVLMYGMMCVVYTTGMWLLLASYLALPVSTTHATIGAMIGMTVVYGGAGCVVWFQESDSFPYVKGVAAIAVSWVLSPIFSGIVSLLVFLTVRAFVLRSPNAFGRSFWVFPILVMVAITVDGEA 159
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BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI)

HSP 1 Score: 193 bits (491), Expect = 2.480e-57
Identity = 89/126 (70.63%), Postives = 104/126 (82.54%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVN 381
            CF DNPGILMYGMMCV+YTTG WL+LASYLELPVSTTHSTIG+I+GM VAY G+ CVVW    D FPY +G+  I  SWV+SP+FSG+ S ++FLTVR  +LRSP AF RSFWV+P+LVM TIAVN
Sbjct:   52 CFLDNPGILMYGMMCVVYTTGMWLLLASYLELPVSTTHSTIGAIIGMAVAYAGSGCVVWYQESDIFPYFKGVAAIAVSWVLSPIFSGVASLLVFLTVRAFVLRSPNAFGRSFWVFPVLVMVTIAVN 177
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BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: D8LJP9_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP9_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.940e-52
Identity = 78/129 (60.47%), Postives = 100/129 (77.52%), Query Frame = 1 
Query:    1 TCFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVNGE 387
            +CF DNPG+LMYGMMCVLYTT  WL+LASYLELPVS T STI SIVGM +AYGG  CVVW    + FP  +G+  I+  W++SP+ +G+ S ++FL +RT +LRSP AF RSFWV+P+LVM  +A++GE
Sbjct:    8 SCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRACVVWHRESEHFPGFQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 136
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BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.110e-49
Identity = 82/128 (64.06%), Postives = 98/128 (76.56%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVNGE 387
            CF DNPGILMYG MCV+YTTG WL+LASY ELPVSTTHSTIG IVGM + Y G DCVVW    D FPY++G+  IVASWV+SPV S +++  LFL +RT +LRSP + +R+  V+P LV  TIAVNG 
Sbjct:    7 CFTDNPGILMYGNMCVVYTTGIWLLLASYFELPVSTTHSTIGGIVGMAMTYRGADCVVWYEEADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFLVTATIAVNGN 134
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BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.570e-48
Identity = 80/126 (63.49%), Postives = 98/126 (77.78%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVN 381
            CFEDNPGILMYG MCV+YTTG WL+LAS+ ELPVSTTHST+G IVGM + Y G DCVVW    D FPY++G+  IVASW +SP+FS +++  LFL +RT +LRSP A +R+  V+P LV  TIAVN
Sbjct:   91 CFEDNPGILMYGNMCVVYTTGIWLLLASFFELPVSTTHSTVGGIVGMAMTYRGADCVVWYEEADLFPYLKGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFLVTATIAVN 216
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BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.630e-48
Identity = 81/126 (64.29%), Postives = 98/126 (77.78%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVN 381
            CFEDNPGILMYG MCV+YTTG WL+LAS+ ELPVSTTHSTIG IVGM + Y G DCVVW    D FPY++G+  IVASWV+SPV S +++  LFL +RT +LRSP + +R+  V+P LV  TIAVN
Sbjct:   92 CFEDNPGILMYGNMCVVYTTGFWLLLASFFELPVSTTHSTIGGIVGMAITYRGPDCVVWYEKADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFLVTATIAVN 217
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BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.180e-44
Identity = 76/126 (60.32%), Postives = 91/126 (72.22%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVN 381
            CF DNPGILMYG MCV+YT G WL+LAS+ ELPVSTTHSTIG IVGM + Y G DCVVW    D FPY++G+  IV SW + PV SG+V+ +LF  VR  +LRS  A  RS  V+P+LV  TIA+ 
Sbjct:   92 CFTDNPGILMYGNMCVVYTNGIWLLLASFFELPVSTTHSTIGGIVGMTMTYRGADCVVWYEEADHFPYIKGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLLVTVTIAIE 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 3.030e-41
Identity = 69/126 (54.76%), Postives = 95/126 (75.40%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVN 381
            CF DNPGILMYG MCV+YT+G WL+LAS+ ELPVSTTH+T+G IVGM + Y G DCVVW    + FPY++G+  IVASW +SPV S +++  L+  +RT +LR+ ++ +++  ++P LV  TIAVN
Sbjct:   99 CFVDNPGILMYGNMCVVYTSGFWLLLASFFELPVSTTHATVGGIVGMAMTYRGADCVVWYEEAEFFPYLKGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCLVTVTIAVN 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: A0A7S2V1L4_9STRA (Phosphate transporter n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1L4_9STRA)

HSP 1 Score: 148 bits (373), Expect = 9.490e-40
Identity = 68/125 (54.40%), Postives = 92/125 (73.60%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAV 378
            CF D+  +LMYGMMCV++ TG WL+LA+ LELPVSTTHSTIG I+GM +A  G+ CV+W  + D FPYV+G+  +V SW++SP+FS IV+ I FLT R  +LR P A++R+   YPI V  T+ +
Sbjct:   82 CFVDDGEMLMYGMMCVIFVTGVWLLLATVLELPVSTTHSTIGGIIGMTMAAKGSSCVIWKTDTDQFPYVKGVAAVVISWILSPLFSAIVAAIFFLTTRATVLRHPDAYKRALLSYPIFVGCTLVI 206
[Close]
BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Match: A0A7R9T173_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T173_9CHLO)

HSP 1 Score: 140 bits (354), Expect = 1.060e-39
Identity = 59/126 (46.83%), Postives = 91/126 (72.22%), Query Frame = 1 
Query:    4 CFEDNPGILMYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVWMNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFERSFWVYPILVMFTIAVN 381
            CF D+PG+LMYG +CV+++   WLV+AS+LE+PVSTTHS +G ++GM +   G+ CVVW    D FPY++G+  IV SW++SP+ SG  SF+ FLT+R  ++RS  ++ R+   +P+L+  T+ +N
Sbjct:   17 CFNDDPGLLMYGCLCVIFSVAIWLVVASFLEMPVSTTHSCVGGMIGMTMVARGSSCVVWSAKSDTFPYIKGVAAIVVSWLLSPIVSGGFSFVFFLTLRALVMRSQNSYARARLAFPVLLACTLIIN 142
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10437.937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJQ4_ECTSI2.100e-6168.22High affinity phosphate transporter n=1 Tax=Ectoca... [more]
D8LJQ6_ECTSI2.480e-5770.63Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJP9_ECTSI1.940e-5260.47High affinity phosphate transporter n=1 Tax=Ectoca... [more]
A0A6H5JNL8_9PHAE1.110e-4964.06Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JNE7_9PHAE3.570e-4863.49Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G0K9_ECTSI3.630e-4864.29Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
D7FZJ7_ECTSI1.180e-4460.32Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D7FWT9_ECTSI3.030e-4154.76Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2V1L4_9STRA9.490e-4054.40Phosphate transporter n=1 Tax=Fibrocapsa japonica ... [more]
A0A7R9T173_9CHLO1.060e-3946.83Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10437contigM-pyrifera_M_contig10437:1400..1789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.5
Seed ortholog evalue3e-41
Seed eggNOG ortholog2880.D8LJQ4
Preferred namePHO89
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Exons1
Model size390
Cds size360
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.620728-CDS-M-pyrifera_M_contig10437:1399..17591622815550.620728-CDS-M-pyrifera_M_contig10437:1399..1759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10437 1400..1759 -
1692277459.6460323-CDS-M-pyrifera_M_contig10437:1399..17591692277459.6460323-CDS-M-pyrifera_M_contig10437:1399..1759Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10437 1400..1759 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.6362555-UTR-M-pyrifera_M_contig10437:1759..17891622815550.6362555-UTR-M-pyrifera_M_contig10437:1759..1789Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10437 1760..1789 -
1692277459.660231-UTR-M-pyrifera_M_contig10437:1759..17891692277459.660231-UTR-M-pyrifera_M_contig10437:1759..1789Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10437 1760..1789 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10437.937.1prot_M-pyrifera_M_contig10437.937.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10437 1400..1759 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10437.937.1

>prot_M-pyrifera_M_contig10437.937.1 ID=prot_M-pyrifera_M_contig10437.937.1|Name=mRNA_M-pyrifera_M_contig10437.937.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MYGMMCVLYTTGTWLVLASYLELPVSTTHSTIGSIVGMVVAYGGTDCVVW
MNNIDAFPYVEGMVTIVASWVISPVFSGIVSFILFLTVRTHILRSPRAFE
RSFWVYPILVMFTIAVNGES
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mRNA from alignment at M-pyrifera_M_contig10437:1400..1789-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10437.937.1 ID=mRNA_M-pyrifera_M_contig10437.937.1|Name=mRNA_M-pyrifera_M_contig10437.937.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig10437:1400..1789- (Macrocystis pyrifera P11B4 male)
ACCTGCTTCGAGGATAACCCGGGCATCTTGATGTACGGTATGATGTGCGT
TTTGTACACGACAGGCACGTGGTTGGTTCTCGCCTCCTATCTAGAGCTGC
CCGTGTCTACGACCCACTCCACTATTGGAAGCATCGTCGGGATGGTCGTG
GCGTACGGGGGCACCGATTGCGTGGTCTGGATGAACAACATCGATGCCTT
CCCGTACGTGGAGGGGATGGTGACGATAGTCGCCTCCTGGGTGATATCTC
CGGTTTTCTCGGGCATTGTATCGTTTATCCTGTTCTTGACCGTGCGCACG
CACATCCTGCGCTCGCCGAGGGCGTTCGAGAGGTCGTTCTGGGTGTACCC
GATACTGGTCATGTTCACCATCGCCGTAAACGGTGAGAGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10437:1400..1789-

>mRNA_M-pyrifera_M_contig10437.937.1 ID=mRNA_M-pyrifera_M_contig10437.937.1|Name=mRNA_M-pyrifera_M_contig10437.937.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig10437:1400..1789- (Macrocystis pyrifera P11B4 male)
ATGTACGGTATGATGTGCGTTTTGTACACGACAGGCACGTGGTTGGTTCT
CGCCTCCTATCTAGAGCTGCCCGTGTCTACGACCCACTCCACTATTGGAA
GCATCGTCGGGATGGTCGTGGCGTACGGGGGCACCGATTGCGTGGTCTGG
ATGAACAACATCGATGCCTTCCCGTACGTGGAGGGGATGGTGACGATAGT
CGCCTCCTGGGTGATATCTCCGGTTTTCTCGGGCATTGTATCGTTTATCC
TGTTCTTGACCGTGCGCACGCACATCCTGCGCTCGCCGAGGGCGTTCGAG
AGGTCGTTCTGGGTGTACCCGATACTGGTCATGTTCACCATCGCCGTAAA
CGGTGAGAGCATGTACGGTATGATGTGCGTTTTGTACACGACAGGCACGT
GGTTGGTTCTCGCCTCCTATCTAGAGCTGCCCGTGTCTACGACCCACTCC
ACTATTGGAAGCATCGTCGGGATGGTCGTGGCGTACGGGGGCACCGATTG
CGTGGTCTGGATGAACAACATCGATGCCTTCCCGTACGTGGAGGGGATGG
TGACGATAGTCGCCTCCTGGGTGATATCTCCGGTTTTCTCGGGCATTGTA
TCGTTTATCCTGTTCTTGACCGTGCGCACGCACATCCTGCGCTCGCCGAG
GGCGTTCGAGAGGTCGTTCTGGGTGTACCCGATACTGGTCATGTTCACCA
TCGCCGTAAACGGTGAGAGC
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