prot_M-pyrifera_M_contig104097.878.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig104097.878.1
Unique Nameprot_M-pyrifera_M_contig104097.878.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length71
Homology
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A210QEK5_MIZYE (Cullin-4A n=3 Tax=Pectinidae TaxID=6566 RepID=A0A210QEK5_MIZYE)

HSP 1 Score: 92.8 bits (229), Expect = 3.350e-23
Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +Q+DAA+VRIMK R +L H  LI+ ++ Q++FPVKP D+K+RIE+L+DRDY+ERD D+   YHYVA
Sbjct:   18 DRQYQVDAAIVRIMKTRKTLTHNLLISELYNQLKFPVKPADLKKRIESLIDRDYMERDKDNPNQYHYVA 86          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: UPI00143F7E1D (cullin-4A-like n=1 Tax=Drosophila miranda TaxID=7229 RepID=UPI00143F7E1D)

HSP 1 Score: 89.7 bits (221), Expect = 5.240e-22
Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +QIDAA+VRIMK R +L H  LI  +F Q+ FPVKP D+K+RIE+L+DRDY+ERD D+   Y+YVA
Sbjct:   16 DRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKPADLKKRIESLIDRDYMERDKDNQNQYNYVA 84          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A1S3QR72_SALSA (cullin-4A-like n=2 Tax=Salmoninae TaxID=504568 RepID=A0A1S3QR72_SALSA)

HSP 1 Score: 89.4 bits (220), Expect = 7.870e-22
Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +QIDAAVVRIMK R +L H  L++ ++ Q++FPVKP D+K+RIE+L+DRDY+ERD +    YHYVA
Sbjct:   18 DRQYQIDAAVVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA 86          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A060XHM2_ONCMY (Cullin_Nedd8 domain-containing protein n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A060XHM2_ONCMY)

HSP 1 Score: 89.4 bits (220), Expect = 1.040e-21
Identity = 40/69 (57.97%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +QIDAA+VRIMK R +L H  L++ V+ Q++FPVKP D+K+RIE+L+DRDY+ERD ++   Y+YVA
Sbjct:   28 DRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYVA 96          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A7S0JVS8_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JVS8_CAFRO)

HSP 1 Score: 92.4 bits (228), Expect = 1.060e-21
Identity = 43/68 (63.24%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    3 RTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            R  Q+DAA+VRIMKAR SLRH+ L+A    Q+R P +P D+KRRIE+L+DRDY+ERDD D+ LY YVA
Sbjct:  140 RQFQMDAALVRIMKARKSLRHEQLVAECVAQLRCPARPADIKRRIESLIDRDYLERDDSDSSLYLYVA 207          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: T1KFD1_TETUR (CULLIN_2 domain-containing protein n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KFD1_TETUR)

HSP 1 Score: 95.9 bits (237), Expect = 1.840e-21
Identity = 43/69 (62.32%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +QIDAAVVRIMK R SL H +LI+ ++ Q+RFPVKP+D+K+RIE+L++RDY+ERD ++  LYHY+A
Sbjct:  667 DRQYQIDAAVVRIMKTRKSLTHTNLISELYDQLRFPVKPLDLKKRIESLIERDYLERDKENPNLYHYLA 735          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A183HGH5_9BILA (CULLIN_2 domain-containing protein n=1 Tax=Onchocerca flexuosa TaxID=387005 RepID=A0A183HGH5_9BILA)

HSP 1 Score: 92.4 bits (228), Expect = 2.730e-21
Identity = 43/69 (62.32%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +QIDAA+VRIMK R SL HQ LI+ +F Q+RFPVKPVD+K+RIE+L++R+Y+ RD DD+ +Y Y+A
Sbjct:  186 DRQYQIDAAIVRIMKTRKSLPHQLLISELFNQLRFPVKPVDLKKRIESLIEREYMCRDKDDSNVYSYLA 254          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A147B9G5_9ACAR (Hs cul (Fragment) n=1 Tax=Carios mimon TaxID=360319 RepID=A0A147B9G5_9ACAR)

HSP 1 Score: 91.7 bits (226), Expect = 3.160e-21
Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +QIDAA+VRIMK R +L H  L+  ++ Q++FPVKP D+K+RIE+L+DRDY+ERD D+   YHYVA
Sbjct:  158 DRQYQIDAAIVRIMKMRKTLSHNLLLTELYDQLKFPVKPTDLKKRIESLIDRDYLERDKDNPNQYHYVA 226          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A2P4XP58_9STRA (Cullin family protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XP58_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.200e-21
Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +Q+DAA+VRIMKAR  L H  L+  +F QVRFP K  D+KRRIE+L+DR+Y+ RD ++ Q+Y+Y+A
Sbjct:   18 DRQYQVDAAIVRIMKARKKLSHALLMTEIFTQVRFPAKAADIKRRIESLIDREYLARDSNNAQMYNYLA 86          
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Match: A0A0L8HHX7_OCTBM (CULLIN_2 domain-containing protein n=3 Tax=Octopus TaxID=6643 RepID=A0A0L8HHX7_OCTBM)

HSP 1 Score: 93.2 bits (230), Expect = 4.060e-21
Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    2 DRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEALLDRDYIERDDDDTQLYHYVA 70
            DR +Q+DAA+VRIMK R +L H  LI+ ++ Q++FPVKP D+K+RIE+L+DRDY+ERD D+   YHYVA
Sbjct:  255 DRQYQVDAAIVRIMKTRKTLSHNLLISELYNQLKFPVKPADLKKRIESLIDRDYMERDKDNPNTYHYVA 323          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104097.878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A210QEK5_MIZYE3.350e-2359.42Cullin-4A n=3 Tax=Pectinidae TaxID=6566 RepID=A0A2... [more]
UPI00143F7E1D5.240e-2260.87cullin-4A-like n=1 Tax=Drosophila miranda TaxID=72... [more]
A0A1S3QR72_SALSA7.870e-2259.42cullin-4A-like n=2 Tax=Salmoninae TaxID=504568 Rep... [more]
A0A060XHM2_ONCMY1.040e-2157.97Cullin_Nedd8 domain-containing protein n=1 Tax=Onc... [more]
A0A7S0JVS8_CAFRO1.060e-2163.24Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
T1KFD1_TETUR1.840e-2162.32CULLIN_2 domain-containing protein n=1 Tax=Tetrany... [more]
A0A183HGH5_9BILA2.730e-2162.32CULLIN_2 domain-containing protein n=1 Tax=Onchoce... [more]
A0A147B9G5_9ACAR3.160e-2159.42Hs cul (Fragment) n=1 Tax=Carios mimon TaxID=36031... [more]
A0A2P4XP58_9STRA3.200e-2156.52Cullin family protein n=1 Tax=Phytophthora palmivo... [more]
A0A0L8HHX7_OCTBM4.060e-2159.42CULLIN_2 domain-containing protein n=3 Tax=Octopus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019559Cullin protein, neddylation domainSMARTSM00884Cullin_Nedd8_2coord: 2..64
e-value: 5.3E-24
score: 95.7
IPR019559Cullin protein, neddylation domainPFAMPF10557Cullin_Nedd8coord: 2..62
e-value: 1.7E-23
score: 82.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..70
e-value: 3.4E-30
score: 105.7
NoneNo IPR availablePANTHERPTHR11932:SF123CULLIN 4, ISOFORM A-RELATEDcoord: 2..70
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 2..70
IPR016157Cullin, conserved sitePROSITEPS01256CULLIN_1coord: 43..70
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104097contigM-pyrifera_M_contig104097:327..539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104097.878.1mRNA_M-pyrifera_M_contig104097.878.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig104097 57..539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig104097.878.1 ID=prot_M-pyrifera_M_contig104097.878.1|Name=mRNA_M-pyrifera_M_contig104097.878.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp
MDRTHQIDAAVVRIMKARSSLRHQDLIAAVFGQVRFPVKPVDVKRRIEAL
LDRDYIERDDDDTQLYHYVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019559Cullin_neddylation_domain
IPR036388WH-like_DNA-bd_sf
IPR016157Cullin_CS
IPR036390WH_DNA-bd_sf