prot_M-pyrifera_M_contig10395.837.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10395.837.1
Unique Nameprot_M-pyrifera_M_contig10395.837.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length349
Homology
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BLAST of mRNA_M-pyrifera_M_contig10395.837.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.910e-38
Identity = 89/142 (62.68%), Postives = 100/142 (70.42%), Query Frame = 0 
Query:    1 DVPDPHPTVLLDLGRRCIVSGLQRKISRQACNPLGLCAGSLPSWCAGLPEEFPSLFSLDVRLSLLKKTAFGMARGVAHVQARNFEKAKKVEEDSPITFLLGSGLESLGVARRGGALTAGAGGAGGAES-----LPLHEVLRQ 137
            D+PDPHP+VL DL RRCIVSGLQRK    ACNPL LC GSLPSWC GLP EFPSLFSL+ RLSLL+KTAFGMAR VAHVQ    EKAK VE+   +   LGS   + G AR GG +     GA GA+S     +PL E+LRQ
Sbjct: 1445 DLPDPHPSVLHDLARRCIVSGLQRK----ACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQ----EKAKNVEDIPAVAAPLGS---AAGTARAGGGVLRRVVGADGADSPASLAMPLPELLRQ 1575
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BLAST of mRNA_M-pyrifera_M_contig10395.837.1 vs. uniprot
Match: D7FHF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF2_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.180e-37
Identity = 80/128 (62.50%), Postives = 91/128 (71.09%), Query Frame = 0 
Query:   24 RKISRQACNPLGLCAGSLPSWCAGLPEEFPSLFSLDVRLSLLKKTAFGMARGVAHVQARNFEKAKKVEEDSPITFLLGSGLESLGVARRGGALTAGAGGAGGAES-----LPLHEVLRQLGRLGRLTV 146
            R  S+QACNPL LC GSLPSWC GLP EFPSLFSL+ RLSLL+KTAFGMAR VAHVQ    EKAK VE+   +   L S   + G AR GG +    GGAGGA+S     +PL E+LRQLGRLGRLT+
Sbjct:    3 RGYSKQACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQ----EKAKNVEDIPAVAAPLRS---AAGTARAGGGVLRRVGGAGGADSPASLAMPLPELLRQLGRLGRLTI 123
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10395.837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2P5_9PHAE3.910e-3862.68HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHF2_ECTSI1.180e-3762.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45670:SF1E3 UBIQUITIN-PROTEIN LIGASE TRIP12coord: 17..164
NoneNo IPR availablePANTHERPTHR45670FAMILY NOT NAMEDcoord: 17..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10395contigM-pyrifera_M_contig10395:4706..10047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10395.837.1mRNA_M-pyrifera_M_contig10395.837.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10395 4706..10047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10395.837.1 ID=prot_M-pyrifera_M_contig10395.837.1|Name=mRNA_M-pyrifera_M_contig10395.837.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=349bp
DVPDPHPTVLLDLGRRCIVSGLQRKISRQACNPLGLCAGSLPSWCAGLPE
EFPSLFSLDVRLSLLKKTAFGMARGVAHVQARNFEKAKKVEEDSPITFLL
GSGLESLGVARRGGALTAGAGGAGGAESLPLHEVLRQLGRLGRLTVLLSR
DSILEMATFLFGLLINGQQPPTTTRGGSGSSSSSHPPQPSSSSSSSAAAA
AAAASAATAAAAAAAAAGGGGNRNGRGGGGGTSSGAIGAGSSAAGRSDGG
GRRGQAPQTSAGSTSDRRRLGSASRAFSGGGGLGFAGRDAHEDQEEEEEE
EEEGWRVGEEEEEEEEEEEDDDGGMWGMGDGGEEEYEEEEDGEGELDEV
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