prot_M-pyrifera_M_contig103934.832.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig103934.832.1
Unique Name	prot_M-pyrifera_M_contig103934.832.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	85

Homology

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: UPI001CF860C6 (UDP-glucose 4-epimerase GalE n=2 Tax=Dechloromonas denitrificans TaxID=281362 RepID=UPI001CF860C6)

HSP 1 Score: 103 bits (258), Expect = 7.260e-25
Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 0

Query:    8 NLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            NLGTGRGYSV EVVAA EKASG+++A  +  RR GD+AACYAD + ARE LGW+A RD+DTMCAD WR+
Sbjct:  258 NLGTGRGYSVLEVVAAFEKASGQKIAYRIVDRRPGDIAACYADPARAREVLGWSADRDIDTMCADAWRW 326

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: UPI00191EDB3F (UDP-glucose 4-epimerase GalE n=1 Tax=Piscinibacter sp. HJYY11 TaxID=2801333 RepID=UPI00191EDB3F)

HSP 1 Score: 102 bits (255), Expect = 2.160e-24
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 0

Query:    8 NLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRYLQR 79
            NLGTGRG+SV EV+ A E+ASGR V   VT RR GDVAACYAD SLAR  LGWTA+R++D MCAD WR+  R
Sbjct:  260 NLGTGRGHSVMEVIRAFERASGRSVPYRVTTRRSGDVAACYADVSLARSLLGWTASRELDQMCADAWRWQSR 331

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: A0A0Q6MEW1_9BURK (UDP-glucose 4-epimerase n=3 Tax=unclassified Rhizobacter TaxID=2640088 RepID=A0A0Q6MEW1_9BURK)

HSP 1 Score: 101 bits (252), Expect = 5.510e-24
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 0

Query:    8 NLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            NLGTGRGYSV EVV A E+ASGR V   V  RR GDVAACYAD SLARE LGWTATRD++ MC+D WR+
Sbjct:  260 NLGTGRGYSVLEVVKAFERASGRPVPHRVMPRRAGDVAACYADPSLARELLGWTATRDIEAMCSDAWRW 328

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: A0A3N9NX42_9BACT (UDP-glucose 4-epimerase n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3N9NX42_9BACT)

HSP 1 Score: 101 bits (252), Expect = 5.740e-24
Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0

Query:    3 GWERFNLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            G E +NLG GRGYSV+EV+ A EKAS R V   VTKRR GD+A CYAD   A+++LGW ATRD+D MCAD WR+
Sbjct:  255 GAEAYNLGAGRGYSVFEVIRAFEKASERSVPYKVTKRRSGDIAMCYADVHKAQQELGWAATRDIDDMCADAWRW 328

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: A0A257JHC4_9BURK (UDP-glucose 4-epimerase (Fragment) n=1 Tax=Burkholderiales bacterium PBB5 TaxID=2015567 RepID=A0A257JHC4_9BURK)

HSP 1 Score: 95.9 bits (237), Expect = 8.460e-24
Identity = 46/69 (66.67%), Postives = 52/69 (75.36%), Query Frame = 0

Query:    8 NLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            NLGTGRGYSV E+VAA  KASGR +   V  RR GDVAACYAD +LAR+ LGW A  D+D MCAD WR+
Sbjct:   39 NLGTGRGYSVLELVAAYAKASGRPIPYEVVARRPGDVAACYADPALARQTLGWQARHDLDRMCADSWRW 107

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: UPI001ADF58C1 (UDP-glucose 4-epimerase GalE n=1 Tax=Rhizobacter sp. AJA081-3 TaxID=2753607 RepID=UPI001ADF58C1)

HSP 1 Score: 101 bits (251), Expect = 9.060e-24
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0

Query:    1 DGGWERFNLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            DG     NLGTGRG+SV EVV A E+ASGRRV  ++  RR GDVAACYAD SLA+  LGW ATRD+D MCAD WR+
Sbjct:  256 DGASLTVNLGTGRGHSVLEVVQAFERASGRRVPYTIMPRRPGDVAACYADPSLAQRLLGWRATRDLDAMCADSWRW 331

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: A0A1J5PDF7_9ZZZZ (UDP-glucose 4-epimerase n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5PDF7_9ZZZZ)

HSP 1 Score: 98.2 bits (243), Expect = 9.430e-24
Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 0

Query:    7 FNLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            +NLGTGRGYSV E+VAA EKASG+ V   +  RR GD+AACYADA LA  +LGW A RD++ MCAD WR+
Sbjct:  125 YNLGTGRGYSVLEMVAAFEKASGKAVPYRIVDRRPGDIAACYADAGLAERELGWRAQRDIEVMCADSWRW 194

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: A0A257DBQ8_9BURK (UDP-glucose 4-epimerase n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DBQ8_9BURK)

HSP 1 Score: 100 bits (250), Expect = 1.120e-23
Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 0

Query:    8 NLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            NLGTGRGYSV E+V A E+ASGR +   +  RR GDVAACYADAS ARE LGW ATRD+D MCAD WR+
Sbjct:  262 NLGTGRGYSVLELVRAFERASGRPIPYDIVARRPGDVAACYADASRARELLGWQATRDIDAMCADSWRW 330

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: A0A4Q7VZG9_9BURK (UDP-glucose 4-epimerase n=1 Tax=Rivibacter subsaxonicus TaxID=457575 RepID=A0A4Q7VZG9_9BURK)

HSP 1 Score: 100 bits (250), Expect = 1.220e-23
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0

Query:    8 NLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRY 76
            NLGTGRG+SV EV+ A E+ASGRR+A  V  RR GDVAACYADA LAR++LGW A RD+D MCAD WR+
Sbjct:  260 NLGTGRGHSVLEVLRAYERASGRRIAHHVGPRRPGDVAACYADAELARQRLGWQARRDLDAMCADSWRW 328

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BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Match: A0A653CVI0_CALMS (UDP-glucose 4-epimerase n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653CVI0_CALMS)

HSP 1 Score: 100 bits (250), Expect = 1.320e-23
Identity = 43/76 (56.58%), Postives = 60/76 (78.95%), Query Frame = 0

Query:    4 WERFNLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYADASLAREKLGWTATRDMDTMCADLWRYLQR 79
            W+ +NLGTGRG+SV E+V A E+ASG++VA  ++ RR+GD+A CYADASLA ++L WTATRD+  MC D W + ++
Sbjct:  269 WKAYNLGTGRGFSVLEMVKAFEEASGKKVAYEISTRREGDIAECYADASLANKELNWTATRDIKAMCRDTWNWQKK 344

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig103934.832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001CF860C6	7.260e-25	69.57	UDP-glucose 4-epimerase GalE n=2 Tax=Dechloromonas...	[more]
UPI00191EDB3F	2.160e-24	68.06	UDP-glucose 4-epimerase GalE n=1 Tax=Piscinibacter...	[more]
A0A0Q6MEW1_9BURK	5.510e-24	72.46	UDP-glucose 4-epimerase n=3 Tax=unclassified Rhizo...	[more]
A0A3N9NX42_9BACT	5.740e-24	63.51	UDP-glucose 4-epimerase n=1 Tax=candidate division...	[more]
A0A257JHC4_9BURK	8.460e-24	66.67	UDP-glucose 4-epimerase (Fragment) n=1 Tax=Burkhol...	[more]
UPI001ADF58C1	9.060e-24	65.79	UDP-glucose 4-epimerase GalE n=1 Tax=Rhizobacter s...	[more]
A0A1J5PDF7_9ZZZZ	9.430e-24	64.29	UDP-glucose 4-epimerase n=1 Tax=mine drainage meta...	[more]
A0A257DBQ8_9BURK	1.120e-23	69.57	UDP-glucose 4-epimerase n=1 Tax=Burkholderiales ba...	[more]
A0A4Q7VZG9_9BURK	1.220e-23	69.57	UDP-glucose 4-epimerase n=1 Tax=Rivibacter subsaxo...	[more]
A0A653CVI0_CALMS	1.320e-23	56.58	UDP-glucose 4-epimerase n=1 Tax=Callosobruchus mac...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 21..72 e-value: 2.6E-6 score: 27.1
None	No IPR available	GENE3D	3.90.25.10		coord: 3..83 e-value: 7.2E-27 score: 95.6
None	No IPR available	PANTHER	PTHR43725:SF14	UDP-GLUCOSE 4-EPIMERASE	coord: 3..78
None	No IPR available	PANTHER	PTHR43725	FAMILY NOT NAMED	coord: 3..78
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 3..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig103934	contig	M-pyrifera_M_contig103934:393..647 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig103934.832.1	mRNA_M-pyrifera_M_contig103934.832.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig103934 393..647 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig103934.832.1 ID=prot_M-pyrifera_M_contig103934.832.1|Name=mRNA_M-pyrifera_M_contig103934.832.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp
DGGWERFNLGTGRGYSVYEVVAAMEKASGRRVALSVTKRRQGDVAACYAD
ASLAREKLGWTATRDMDTMCADLWRYLQRQHSDE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR036291	NAD(P)-bd_dom_sf