prot_M-pyrifera_M_contig103863.822.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig103863.822.1
Unique Nameprot_M-pyrifera_M_contig103863.822.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length149
Homology
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BLAST of mRNA_M-pyrifera_M_contig103863.822.1 vs. uniprot
Match: A0A5A8EBY8_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBY8_CAFRO)

HSP 1 Score: 125 bits (315), Expect = 3.480e-32
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 0 
Query:    1 CGPEFDLFVSPISNKTYKNPNLPNGFKPSAPLSALSALNVSFSVGLPMAERTERCGRGSECGPGGEIDYGYVVLGLI---IDNEVAKETVFYQAVLYDSRQDTPQCGVQECIPRPQQWYFSQQPFGVNDAIGTFNLPCLHP 138
            CG E DLF++P+       P    G + S PL+++S L V+ +  L  A  + RCG   +CGPGG++DYGY VLG++   +D     +T+FYQ +L D+RQ +P  G Q C  RP  WYF Q P+G +D I  F  PCL P
Sbjct:  132 CGTEDDLFLAPVGGNY---PGAQQGMRRSPPLASMSQLRVTMTASLDTAAASVRCGADPQCGPGGKVDYGYAVLGIVCSALDAPGGGQTLFYQVLLADTRQHSPCAGGQACSKRPLAWYFKQNPYGASDTIANFGAPCLEP 269
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103863.822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5A8EBY8_CAFRO3.480e-3242.55Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103863contigM-pyrifera_M_contig103863:20..466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103863.822.1mRNA_M-pyrifera_M_contig103863.822.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig103863 20..466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig103863.822.1 ID=prot_M-pyrifera_M_contig103863.822.1|Name=mRNA_M-pyrifera_M_contig103863.822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
CGPEFDLFVSPISNKTYKNPNLPNGFKPSAPLSALSALNVSFSVGLPMAE
RTERCGRGSECGPGGEIDYGYVVLGLIIDNEVAKETVFYQAVLYDSRQDT
PQCGVQECIPRPQQWYFSQQPFGVNDAIGTFNLPCLHPTPPSNHSSPTL
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